GCA_018603715.1 - 6 region(s)

Identified primary metabolite regions

JAHFZV010000015 (original name was: JAHFZV010000015.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 28.1	hydroxybenzoate2phenol	Aromatic	16,571	38,609	hydroxybenzoate2phenol K. pneumoniae	PHE	100%

JAHFZV010000017 (original name was: JAHFZV010000017.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 30.1	fatty_acids-unassigned	Putative	12,042	37,474	Acetate to butyrate C. sporogenes	BUT	33%

JAHFZV010000023 (original name was: JAHFZV010000023.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 37.1	Putrescine2spermidine,Nitrate_reductase	E-MGC	1	42,974	Nitrate reductase E. coli	NIR	60%

JAHFZV010000024 (original name was: JAHFZV010000024.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 38.1	fatty_acids-unassigned	Putative	1	15,988	Acetate to butyrate C. sporogenes	BUT	50%

JAHFZV010000032 (original name was: JAHFZV010000032.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 47.1	histidine2glutamate_hutHGIU_operon	Other	39,787	60,758	Histidine to glutamate K. pneumoniae	GLU	60%

JAHFZV010000007 (original name was: JAHFZV010000007.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 99.1	TPP_AA_metabolism,TPP_fatty_acids,Fumarate2succinate	SCFA	8,287	42,701	Acetate to butyrate C. sporogenes	BUT	33%

No primary metabolite regions were found in these records:: JAHFZV010000100 (original name was: JAHFZV010000100.1); JAHFZV010000101 (original name was: JAHFZV010000101.1); JAHFZV010000102 (original name was: JAHFZV010000102.1); JAHFZV010000103 (original name was: JAHFZV010000103.1); JAHFZV010000104 (original name was: JAHFZV010000104.1); JAHFZV010000105 (original name was: JAHFZV010000105.1); JAHFZV010000106 (original name was: JAHFZV010000106.1); JAHFZV010000107 (original name was: JAHFZV010000107.1); JAHFZV010000108 (original name was: JAHFZV010000108.1); JAHFZV010000109 (original name was: JAHFZV010000109.1); JAHFZV010000010 (original name was: JAHFZV010000010.1); JAHFZV010000110 (original name was: JAHFZV010000110.1); JAHFZV010000111 (original name was: JAHFZV010000111.1); JAHFZV010000112 (original name was: JAHFZV010000112.1); JAHFZV010000113 (original name was: JAHFZV010000113.1); JAHFZV010000114 (original name was: JAHFZV010000114.1); JAHFZV010000115 (original name was: JAHFZV010000115.1); JAHFZV010000116 (original name was: JAHFZV010000116.1); JAHFZV010000117 (original name was: JAHFZV010000117.1); JAHFZV010000011 (original name was: JAHFZV010000011.1); JAHFZV010000118 (original name was: JAHFZV010000118.1); JAHFZV010000119 (original name was: JAHFZV010000119.1); JAHFZV010000120 (original name was: JAHFZV010000120.1); JAHFZV010000012 (original name was: JAHFZV010000012.1); JAHFZV010000121 (original name was: JAHFZV010000121.1); JAHFZV010000013 (original name was: JAHFZV010000013.1); JAHFZV010000014 (original name was: JAHFZV010000014.1); JAHFZV010000016 (original name was: JAHFZV010000016.1); JAHFZV010000018 (original name was: JAHFZV010000018.1); JAHFZV010000019 (original name was: JAHFZV010000019.1); JAHFZV010000001 (original name was: JAHFZV010000001.1); JAHFZV010000020 (original name was: JAHFZV010000020.1); JAHFZV010000021 (original name was: JAHFZV010000021.1); JAHFZV010000022 (original name was: JAHFZV010000022.1); JAHFZV010000025 (original name was: JAHFZV010000025.1); JAHFZV010000026 (original name was: JAHFZV010000026.1); JAHFZV010000027 (original name was: JAHFZV010000027.1); JAHFZV010000028 (original name was: JAHFZV010000028.1); JAHFZV010000029 (original name was: JAHFZV010000029.1); JAHFZV010000002 (original name was: JAHFZV010000002.1); JAHFZV010000030 (original name was: JAHFZV010000030.1); JAHFZV010000031 (original name was: JAHFZV010000031.1); JAHFZV010000033 (original name was: JAHFZV010000033.1); JAHFZV010000034 (original name was: JAHFZV010000034.1); JAHFZV010000035 (original name was: JAHFZV010000035.1); JAHFZV010000036 (original name was: JAHFZV010000036.1); JAHFZV010000037 (original name was: JAHFZV010000037.1); JAHFZV010000038 (original name was: JAHFZV010000038.1); JAHFZV010000039 (original name was: JAHFZV010000039.1); JAHFZV010000003 (original name was: JAHFZV010000003.1); JAHFZV010000040 (original name was: JAHFZV010000040.1); JAHFZV010000041 (original name was: JAHFZV010000041.1); JAHFZV010000042 (original name was: JAHFZV010000042.1); JAHFZV010000043 (original name was: JAHFZV010000043.1); JAHFZV010000044 (original name was: JAHFZV010000044.1); JAHFZV010000045 (original name was: JAHFZV010000045.1); JAHFZV010000046 (original name was: JAHFZV010000046.1); JAHFZV010000047 (original name was: JAHFZV010000047.1); JAHFZV010000048 (original name was: JAHFZV010000048.1); JAHFZV010000049 (original name was: JAHFZV010000049.1); JAHFZV010000004 (original name was: JAHFZV010000004.1); JAHFZV010000050 (original name was: JAHFZV010000050.1); JAHFZV010000051 (original name was: JAHFZV010000051.1); JAHFZV010000052 (original name was: JAHFZV010000052.1); JAHFZV010000053 (original name was: JAHFZV010000053.1); JAHFZV010000054 (original name was: JAHFZV010000054.1); JAHFZV010000055 (original name was: JAHFZV010000055.1); JAHFZV010000056 (original name was: JAHFZV010000056.1); JAHFZV010000057 (original name was: JAHFZV010000057.1); JAHFZV010000058 (original name was: JAHFZV010000058.1); JAHFZV010000059 (original name was: JAHFZV010000059.1); JAHFZV010000005 (original name was: JAHFZV010000005.1); JAHFZV010000060 (original name was: JAHFZV010000060.1); JAHFZV010000061 (original name was: JAHFZV010000061.1); JAHFZV010000062 (original name was: JAHFZV010000062.1); JAHFZV010000063 (original name was: JAHFZV010000063.1); JAHFZV010000064 (original name was: JAHFZV010000064.1); JAHFZV010000065 (original name was: JAHFZV010000065.1); JAHFZV010000066 (original name was: JAHFZV010000066.1); JAHFZV010000067 (original name was: JAHFZV010000067.1); JAHFZV010000068 (original name was: JAHFZV010000068.1); JAHFZV010000069 (original name was: JAHFZV010000069.1); JAHFZV010000006 (original name was: JAHFZV010000006.1); JAHFZV010000070 (original name was: JAHFZV010000070.1); JAHFZV010000071 (original name was: JAHFZV010000071.1); JAHFZV010000072 (original name was: JAHFZV010000072.1); JAHFZV010000073 (original name was: JAHFZV010000073.1); JAHFZV010000074 (original name was: JAHFZV010000074.1); JAHFZV010000075 (original name was: JAHFZV010000075.1); JAHFZV010000076 (original name was: JAHFZV010000076.1); JAHFZV010000077 (original name was: JAHFZV010000077.1); JAHFZV010000078 (original name was: JAHFZV010000078.1); JAHFZV010000079 (original name was: JAHFZV010000079.1); JAHFZV010000080 (original name was: JAHFZV010000080.1); JAHFZV010000081 (original name was: JAHFZV010000081.1); JAHFZV010000082 (original name was: JAHFZV010000082.1); JAHFZV010000083 (original name was: JAHFZV010000083.1); JAHFZV010000084 (original name was: JAHFZV010000084.1); JAHFZV010000085 (original name was: JAHFZV010000085.1); JAHFZV010000086 (original name was: JAHFZV010000086.1); JAHFZV010000087 (original name was: JAHFZV010000087.1); JAHFZV010000088 (original name was: JAHFZV010000088.1); JAHFZV010000089 (original name was: JAHFZV010000089.1); JAHFZV010000008 (original name was: JAHFZV010000008.1); JAHFZV010000090 (original name was: JAHFZV010000090.1); JAHFZV010000091 (original name was: JAHFZV010000091.1); JAHFZV010000092 (original name was: JAHFZV010000092.1); JAHFZV010000093 (original name was: JAHFZV010000093.1); JAHFZV010000094 (original name was: JAHFZV010000094.1); JAHFZV010000095 (original name was: JAHFZV010000095.1); JAHFZV010000096 (original name was: JAHFZV010000096.1); JAHFZV010000097 (original name was: JAHFZV010000097.1); JAHFZV010000098 (original name was: JAHFZV010000098.1); JAHFZV010000099 (original name was: JAHFZV010000099.1); JAHFZV010000009 (original name was: JAHFZV010000009.1)

Compact view

c00028_JAHFZV0.. - Region 1 - hydroxybenzoate2phenol

Download region GenBank file

Location: 16,571 - 38,609 nt. (total: 22,039 nt) Show pHMM detection rules used

hydroxybenzoate2phenol: (Flavoprotein and Phea_decarb and not ubi_syn)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00030_JAHFZV0.. - Region 1 - fatty_acids-unassigned

Download region GenBank file

Location: 12,042 - 37,474 nt. (total: 25,433 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00037_JAHFZV0.. - Region 1 - Nitrate_reductase,Putrescine2spermidine

Download region GenBank file

Location: 1 - 42,974 nt. (total: 42,974 nt) Show pHMM detection rules used

Region on contig edge.

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))
Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00038_JAHFZV0.. - Region 1 - fatty_acids-unassigned

Download region GenBank file

Location: 1 - 15,988 nt. (total: 15,988 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00047_JAHFZV0.. - Region 1 - histidine2glutamate_hutHGIU_operon

Download region GenBank file

Location: 39,787 - 60,758 nt. (total: 20,972 nt) Show pHMM detection rules used

Region on contig edge.

histidine2glutamate_hutHGIU_operon: (minimum(3, [Amidohydro_1, Amidohydro_3, Arginase, FGase, Urocanase]) and Lyase_aromatic and Urocanase_C)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00099_JAHFZV0.. - Region 1 - Fumarate2succinate,TPP_AA_metabolism,TPP_fatty_acids

Download region GenBank file

Location: 8,287 - 42,701 nt. (total: 34,415 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))
TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))
Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters