GCA_018606885.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAHCUP010000001 (original name was: JAHCUP010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	212,496	226,154	gassericin T	RiPP	44%
Region 11.2	RiPP-like	419,367	429,097
Region 11.3	RiPP-like	936,541	946,844	gassericin T	RiPP	22%

JAHCUP010000028 (original name was: JAHCUP010000028.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RiPP-like	1	4,686

No secondary metabolite regions were found in these records:: JAHCUP010000010 (original name was: JAHCUP010000010.1); JAHCUP010000011 (original name was: JAHCUP010000011.1); JAHCUP010000012 (original name was: JAHCUP010000012.1); JAHCUP010000013 (original name was: JAHCUP010000013.1); JAHCUP010000014 (original name was: JAHCUP010000014.1); JAHCUP010000015 (original name was: JAHCUP010000015.1); JAHCUP010000016 (original name was: JAHCUP010000016.1); JAHCUP010000017 (original name was: JAHCUP010000017.1); JAHCUP010000018 (original name was: JAHCUP010000018.1); JAHCUP010000019 (original name was: JAHCUP010000019.1); JAHCUP010000020 (original name was: JAHCUP010000020.1); JAHCUP010000021 (original name was: JAHCUP010000021.1); JAHCUP010000022 (original name was: JAHCUP010000022.1); JAHCUP010000023 (original name was: JAHCUP010000023.1); JAHCUP010000024 (original name was: JAHCUP010000024.1); JAHCUP010000025 (original name was: JAHCUP010000025.1); JAHCUP010000026 (original name was: JAHCUP010000026.1); JAHCUP010000027 (original name was: JAHCUP010000027.1); JAHCUP010000029 (original name was: JAHCUP010000029.1); JAHCUP010000002 (original name was: JAHCUP010000002.1); JAHCUP010000030 (original name was: JAHCUP010000030.1); JAHCUP010000031 (original name was: JAHCUP010000031.1); JAHCUP010000032 (original name was: JAHCUP010000032.1); JAHCUP010000033 (original name was: JAHCUP010000033.1); JAHCUP010000034 (original name was: JAHCUP010000034.1); JAHCUP010000035 (original name was: JAHCUP010000035.1); JAHCUP010000036 (original name was: JAHCUP010000036.1); JAHCUP010000037 (original name was: JAHCUP010000037.1); JAHCUP010000038 (original name was: JAHCUP010000038.1); JAHCUP010000003 (original name was: JAHCUP010000003.1); JAHCUP010000004 (original name was: JAHCUP010000004.1); JAHCUP010000005 (original name was: JAHCUP010000005.1); JAHCUP010000006 (original name was: JAHCUP010000006.1); JAHCUP010000007 (original name was: JAHCUP010000007.1); JAHCUP010000008 (original name was: JAHCUP010000008.1); JAHCUP010000009 (original name was: JAHCUP010000009.1)

Compact view

c00011_JAHCUP0.. - Region 1 - RiPP-like

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Location: 212,496 - 226,154 nt. (total: 13,659 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

Similar known gene clusters

c00011_JAHCUP0.. - Region 2 - RiPP-like

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Location: 419,367 - 429,097 nt. (total: 9,731 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00011_JAHCUP0.. - Region 3 - RiPP-like

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Location: 936,541 - 946,844 nt. (total: 10,304 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00020_JAHCUP0.. - Region 1 - RiPP-like

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Location: 1 - 4,686 nt. (total: 4,686 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.