GCA_018917305.1 - 3 region(s)

Identified primary metabolite regions

JAHLOK010000001 (original name was: JAHLOK010000001.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	TPP_fatty_acids	Putative	218,944	244,645

JAHLOK010000004 (original name was: JAHLOK010000004.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 4.1	TPP_AA_metabolism	Putative	5,796	37,931

JAHLOK010000006 (original name was: JAHLOK010000006.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 6.1	Pyruvate2acetate-formate	SCFA	10,284	33,528	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 1.1	TPP_fatty_acids	Putative	218,944	244,645
Region 4.1	TPP_AA_metabolism	Putative	5,796	37,931
Region 6.1	Pyruvate2acetate-formate	SCFA	10,284	33,528	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: JAHLOK010000002 (original name was: JAHLOK010000002.1); JAHLOK010000003 (original name was: JAHLOK010000003.1); JAHLOK010000005 (original name was: JAHLOK010000005.1); JAHLOK010000007 (original name was: JAHLOK010000007.1); JAHLOK010000008 (original name was: JAHLOK010000008.1); JAHLOK010000009 (original name was: JAHLOK010000009.1); JAHLOK010000010 (original name was: JAHLOK010000010.1); JAHLOK010000011 (original name was: JAHLOK010000011.1); JAHLOK010000012 (original name was: JAHLOK010000012.1); JAHLOK010000013 (original name was: JAHLOK010000013.1); JAHLOK010000014 (original name was: JAHLOK010000014.1); JAHLOK010000015 (original name was: JAHLOK010000015.1); JAHLOK010000016 (original name was: JAHLOK010000016.1); JAHLOK010000017 (original name was: JAHLOK010000017.1); JAHLOK010000018 (original name was: JAHLOK010000018.1); JAHLOK010000019 (original name was: JAHLOK010000019.1); JAHLOK010000020 (original name was: JAHLOK010000020.1); JAHLOK010000021 (original name was: JAHLOK010000021.1); JAHLOK010000022 (original name was: JAHLOK010000022.1); JAHLOK010000023 (original name was: JAHLOK010000023.1); JAHLOK010000024 (original name was: JAHLOK010000024.1); JAHLOK010000025 (original name was: JAHLOK010000025.1); JAHLOK010000026 (original name was: JAHLOK010000026.1); JAHLOK010000027 (original name was: JAHLOK010000027.1); JAHLOK010000028 (original name was: JAHLOK010000028.1); JAHLOK010000029 (original name was: JAHLOK010000029.1); JAHLOK010000030 (original name was: JAHLOK010000030.1); JAHLOK010000031 (original name was: JAHLOK010000031.1); JAHLOK010000032 (original name was: JAHLOK010000032.1); JAHLOK010000033 (original name was: JAHLOK010000033.1); JAHLOK010000034 (original name was: JAHLOK010000034.1); JAHLOK010000035 (original name was: JAHLOK010000035.1); JAHLOK010000036 (original name was: JAHLOK010000036.1); JAHLOK010000037 (original name was: JAHLOK010000037.1); JAHLOK010000038 (original name was: JAHLOK010000038.1); JAHLOK010000039 (original name was: JAHLOK010000039.1); JAHLOK010000040 (original name was: JAHLOK010000040.1); JAHLOK010000041 (original name was: JAHLOK010000041.1); JAHLOK010000042 (original name was: JAHLOK010000042.1); JAHLOK010000043 (original name was: JAHLOK010000043.1); JAHLOK010000044 (original name was: JAHLOK010000044.1); JAHLOK010000045 (original name was: JAHLOK010000045.1); JAHLOK010000046 (original name was: JAHLOK010000046.1); JAHLOK010000047 (original name was: JAHLOK010000047.1); JAHLOK010000048 (original name was: JAHLOK010000048.1); JAHLOK010000049 (original name was: JAHLOK010000049.1); JAHLOK010000050 (original name was: JAHLOK010000050.1); JAHLOK010000051 (original name was: JAHLOK010000051.1); JAHLOK010000052 (original name was: JAHLOK010000052.1); JAHLOK010000053 (original name was: JAHLOK010000053.1); JAHLOK010000054 (original name was: JAHLOK010000054.1); JAHLOK010000055 (original name was: JAHLOK010000055.1); JAHLOK010000056 (original name was: JAHLOK010000056.1); JAHLOK010000057 (original name was: JAHLOK010000057.1); JAHLOK010000058 (original name was: JAHLOK010000058.1); JAHLOK010000059 (original name was: JAHLOK010000059.1); JAHLOK010000060 (original name was: JAHLOK010000060.1); JAHLOK010000061 (original name was: JAHLOK010000061.1); JAHLOK010000062 (original name was: JAHLOK010000062.1); JAHLOK010000063 (original name was: JAHLOK010000063.1); JAHLOK010000064 (original name was: JAHLOK010000064.1); JAHLOK010000065 (original name was: JAHLOK010000065.1); JAHLOK010000066 (original name was: JAHLOK010000066.1); JAHLOK010000067 (original name was: JAHLOK010000067.1); JAHLOK010000068 (original name was: JAHLOK010000068.1); JAHLOK010000069 (original name was: JAHLOK010000069.1); JAHLOK010000070 (original name was: JAHLOK010000070.1); JAHLOK010000071 (original name was: JAHLOK010000071.1)

Compact view

c00001_JAHLOK0.. - Region 1 - TPP_fatty_acids

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Location: 218,944 - 244,645 nt. (total: 25,702 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00004_JAHLOK0.. - Region 1 - TPP_AA_metabolism

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Location: 5,796 - 37,931 nt. (total: 32,136 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00006_JAHLOK0.. - Region 1 - Pyruvate2acetate-formate

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Location: 10,284 - 33,528 nt. (total: 23,245 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters