GCA_018966905.1 - 7 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAHLXJ010000012 (original name was: JAHLXJ010000012.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RaS-RiPP	40,577	59,292

JAHLXJ010000013 (original name was: JAHLXJ010000013.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	lanthipeptide-class-i	14,099	38,152	lactocin S	RiPP:Lanthipeptide	10%

JAHLXJ010000001 (original name was: JAHLXJ010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	195,871	217,004

JAHLXJ010000002 (original name was: JAHLXJ010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RaS-RiPP	59,669	81,691	streptide	RiPP	100%

JAHLXJ010000006 (original name was: JAHLXJ010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	RiPP-like	87,693	100,972

JAHLXJ010000007 (original name was: JAHLXJ010000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	NRPS-like	48,522	91,413	asukamycin	Polyketide:Type II	4%

JAHLXJ010000008 (original name was: JAHLXJ010000008.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	lanthipeptide-class-iv	78,084	91,747

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	RaS-RiPP	40,577	59,292
Region 4.1	lanthipeptide-class-i	14,099	38,152	lactocin S	RiPP:Lanthipeptide	10%
Region 11.1	RRE-containing	195,871	217,004
Region 22.1	RaS-RiPP	59,669	81,691	streptide	RiPP	100%
Region 36.1	RiPP-like	87,693	100,972
Region 37.1	NRPS-like	48,522	91,413	asukamycin	Polyketide:Type II	4%
Region 38.1	lanthipeptide-class-iv	78,084	91,747

No secondary metabolite regions were found in these records:: JAHLXJ010000010 (original name was: JAHLXJ010000010.1); JAHLXJ010000011 (original name was: JAHLXJ010000011.1); JAHLXJ010000014 (original name was: JAHLXJ010000014.1); JAHLXJ010000015 (original name was: JAHLXJ010000015.1); JAHLXJ010000016 (original name was: JAHLXJ010000016.1); JAHLXJ010000017 (original name was: JAHLXJ010000017.1); JAHLXJ010000018 (original name was: JAHLXJ010000018.1); JAHLXJ010000019 (original name was: JAHLXJ010000019.1); JAHLXJ010000020 (original name was: JAHLXJ010000020.1); JAHLXJ010000021 (original name was: JAHLXJ010000021.1); JAHLXJ010000022 (original name was: JAHLXJ010000022.1); JAHLXJ010000023 (original name was: JAHLXJ010000023.1); JAHLXJ010000024 (original name was: JAHLXJ010000024.1); JAHLXJ010000025 (original name was: JAHLXJ010000025.1); JAHLXJ010000026 (original name was: JAHLXJ010000026.1); JAHLXJ010000027 (original name was: JAHLXJ010000027.1); JAHLXJ010000028 (original name was: JAHLXJ010000028.1); JAHLXJ010000029 (original name was: JAHLXJ010000029.1); JAHLXJ010000030 (original name was: JAHLXJ010000030.1); JAHLXJ010000031 (original name was: JAHLXJ010000031.1); JAHLXJ010000032 (original name was: JAHLXJ010000032.1); JAHLXJ010000033 (original name was: JAHLXJ010000033.1); JAHLXJ010000034 (original name was: JAHLXJ010000034.1); JAHLXJ010000035 (original name was: JAHLXJ010000035.1); JAHLXJ010000036 (original name was: JAHLXJ010000036.1); JAHLXJ010000037 (original name was: JAHLXJ010000037.1); JAHLXJ010000038 (original name was: JAHLXJ010000038.1); JAHLXJ010000039 (original name was: JAHLXJ010000039.1); JAHLXJ010000003 (original name was: JAHLXJ010000003.1); JAHLXJ010000004 (original name was: JAHLXJ010000004.1); JAHLXJ010000005 (original name was: JAHLXJ010000005.1); JAHLXJ010000009 (original name was: JAHLXJ010000009.1)

Compact view

c00003_JAHLXJ0.. - Region 1 - RaS-RiPP

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Location: 40,577 - 59,292 nt. (total: 18,716 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00004_JAHLXJ0.. - Region 1 - lanthipeptide-class-i

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Location: 14,099 - 38,152 nt. (total: 24,054 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

Lanthipeptides

Core peptide predictions

No core peptides found.

c00011_JAHLXJ0.. - Region 1 - RRE-containing

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Location: 195,871 - 217,004 nt. (total: 21,134 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00022_JAHLXJ0.. - Region 1 - RaS-RiPP

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Location: 59,669 - 81,691 nt. (total: 22,023 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00036_JAHLXJ0.. - Region 1 - RiPP-like

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Location: 87,693 - 100,972 nt. (total: 13,280 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00037_JAHLXJ0.. - Region 1 - NRPS-like

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Location: 48,522 - 91,413 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

c00038_JAHLXJ0.. - Region 1 - lanthipeptide-class-iv

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Location: 78,084 - 91,747 nt. (total: 13,664 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.