GCA_018966985.1 - 3 region(s)

Identified primary metabolite regions

JAHLXL010000001 (original name was: JAHLXL010000001.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 84.1	Pyruvate2acetate-formate	SCFA	49,936	73,180	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JAHLXL010000029 (original name was: JAHLXL010000029.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 94.1	TPP_fatty_acids	Putative	12,634	28,550

JAHLXL010000009 (original name was: JAHLXL010000009.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 172.1	TPP_AA_metabolism	Putative	4,591	36,724

No primary metabolite regions were found in these records:: JAHLXL010000100 (original name was: JAHLXL010000100.1); JAHLXL010000101 (original name was: JAHLXL010000101.1); JAHLXL010000102 (original name was: JAHLXL010000102.1); JAHLXL010000103 (original name was: JAHLXL010000103.1); JAHLXL010000104 (original name was: JAHLXL010000104.1); JAHLXL010000105 (original name was: JAHLXL010000105.1); JAHLXL010000106 (original name was: JAHLXL010000106.1); JAHLXL010000107 (original name was: JAHLXL010000107.1); JAHLXL010000108 (original name was: JAHLXL010000108.1); JAHLXL010000109 (original name was: JAHLXL010000109.1); JAHLXL010000010 (original name was: JAHLXL010000010.1); JAHLXL010000110 (original name was: JAHLXL010000110.1); JAHLXL010000111 (original name was: JAHLXL010000111.1); JAHLXL010000112 (original name was: JAHLXL010000112.1); JAHLXL010000113 (original name was: JAHLXL010000113.1); JAHLXL010000114 (original name was: JAHLXL010000114.1); JAHLXL010000115 (original name was: JAHLXL010000115.1); JAHLXL010000116 (original name was: JAHLXL010000116.1); JAHLXL010000117 (original name was: JAHLXL010000117.1); JAHLXL010000118 (original name was: JAHLXL010000118.1); JAHLXL010000011 (original name was: JAHLXL010000011.1); JAHLXL010000119 (original name was: JAHLXL010000119.1); JAHLXL010000120 (original name was: JAHLXL010000120.1); JAHLXL010000121 (original name was: JAHLXL010000121.1); JAHLXL010000122 (original name was: JAHLXL010000122.1); JAHLXL010000123 (original name was: JAHLXL010000123.1); JAHLXL010000124 (original name was: JAHLXL010000124.1); JAHLXL010000125 (original name was: JAHLXL010000125.1); JAHLXL010000126 (original name was: JAHLXL010000126.1); JAHLXL010000127 (original name was: JAHLXL010000127.1); JAHLXL010000012 (original name was: JAHLXL010000012.1); JAHLXL010000128 (original name was: JAHLXL010000128.1); JAHLXL010000129 (original name was: JAHLXL010000129.1); JAHLXL010000130 (original name was: JAHLXL010000130.1); JAHLXL010000131 (original name was: JAHLXL010000131.1); JAHLXL010000132 (original name was: JAHLXL010000132.1); JAHLXL010000133 (original name was: JAHLXL010000133.1); JAHLXL010000134 (original name was: JAHLXL010000134.1); JAHLXL010000135 (original name was: JAHLXL010000135.1); JAHLXL010000013 (original name was: JAHLXL010000013.1); JAHLXL010000136 (original name was: JAHLXL010000136.1); JAHLXL010000137 (original name was: JAHLXL010000137.1); JAHLXL010000138 (original name was: JAHLXL010000138.1); JAHLXL010000139 (original name was: JAHLXL010000139.1); JAHLXL010000140 (original name was: JAHLXL010000140.1); JAHLXL010000141 (original name was: JAHLXL010000141.1); JAHLXL010000142 (original name was: JAHLXL010000142.1); JAHLXL010000143 (original name was: JAHLXL010000143.1); JAHLXL010000144 (original name was: JAHLXL010000144.1); JAHLXL010000014 (original name was: JAHLXL010000014.1); JAHLXL010000145 (original name was: JAHLXL010000145.1); JAHLXL010000146 (original name was: JAHLXL010000146.1); JAHLXL010000147 (original name was: JAHLXL010000147.1); JAHLXL010000148 (original name was: JAHLXL010000148.1); JAHLXL010000149 (original name was: JAHLXL010000149.1); JAHLXL010000150 (original name was: JAHLXL010000150.1); JAHLXL010000151 (original name was: JAHLXL010000151.1); JAHLXL010000152 (original name was: JAHLXL010000152.1); JAHLXL010000153 (original name was: JAHLXL010000153.1); JAHLXL010000015 (original name was: JAHLXL010000015.1); JAHLXL010000154 (original name was: JAHLXL010000154.1); JAHLXL010000155 (original name was: JAHLXL010000155.1); JAHLXL010000156 (original name was: JAHLXL010000156.1); JAHLXL010000157 (original name was: JAHLXL010000157.1); JAHLXL010000158 (original name was: JAHLXL010000158.1); JAHLXL010000159 (original name was: JAHLXL010000159.1); JAHLXL010000160 (original name was: JAHLXL010000160.1); JAHLXL010000161 (original name was: JAHLXL010000161.1); JAHLXL010000016 (original name was: JAHLXL010000016.1); JAHLXL010000162 (original name was: JAHLXL010000162.1); JAHLXL010000163 (original name was: JAHLXL010000163.1); JAHLXL010000164 (original name was: JAHLXL010000164.1); JAHLXL010000165 (original name was: JAHLXL010000165.1); JAHLXL010000166 (original name was: JAHLXL010000166.1); JAHLXL010000167 (original name was: JAHLXL010000167.1); JAHLXL010000168 (original name was: JAHLXL010000168.1); JAHLXL010000169 (original name was: JAHLXL010000169.1); JAHLXL010000017 (original name was: JAHLXL010000017.1); JAHLXL010000170 (original name was: JAHLXL010000170.1); JAHLXL010000171 (original name was: JAHLXL010000171.1); JAHLXL010000172 (original name was: JAHLXL010000172.1); JAHLXL010000018 (original name was: JAHLXL010000018.1); JAHLXL010000019 (original name was: JAHLXL010000019.1); JAHLXL010000020 (original name was: JAHLXL010000020.1); JAHLXL010000021 (original name was: JAHLXL010000021.1); JAHLXL010000022 (original name was: JAHLXL010000022.1); JAHLXL010000023 (original name was: JAHLXL010000023.1); JAHLXL010000024 (original name was: JAHLXL010000024.1); JAHLXL010000025 (original name was: JAHLXL010000025.1); JAHLXL010000026 (original name was: JAHLXL010000026.1); JAHLXL010000027 (original name was: JAHLXL010000027.1); JAHLXL010000028 (original name was: JAHLXL010000028.1); JAHLXL010000002 (original name was: JAHLXL010000002.1); JAHLXL010000030 (original name was: JAHLXL010000030.1); JAHLXL010000031 (original name was: JAHLXL010000031.1); JAHLXL010000032 (original name was: JAHLXL010000032.1); JAHLXL010000033 (original name was: JAHLXL010000033.1); JAHLXL010000034 (original name was: JAHLXL010000034.1); JAHLXL010000035 (original name was: JAHLXL010000035.1); JAHLXL010000036 (original name was: JAHLXL010000036.1); JAHLXL010000037 (original name was: JAHLXL010000037.1); JAHLXL010000038 (original name was: JAHLXL010000038.1); JAHLXL010000039 (original name was: JAHLXL010000039.1); JAHLXL010000003 (original name was: JAHLXL010000003.1); JAHLXL010000040 (original name was: JAHLXL010000040.1); JAHLXL010000041 (original name was: JAHLXL010000041.1); JAHLXL010000042 (original name was: JAHLXL010000042.1); JAHLXL010000043 (original name was: JAHLXL010000043.1); JAHLXL010000044 (original name was: JAHLXL010000044.1); JAHLXL010000045 (original name was: JAHLXL010000045.1); JAHLXL010000046 (original name was: JAHLXL010000046.1); JAHLXL010000047 (original name was: JAHLXL010000047.1); JAHLXL010000048 (original name was: JAHLXL010000048.1); JAHLXL010000049 (original name was: JAHLXL010000049.1); JAHLXL010000004 (original name was: JAHLXL010000004.1); JAHLXL010000050 (original name was: JAHLXL010000050.1); JAHLXL010000051 (original name was: JAHLXL010000051.1); JAHLXL010000052 (original name was: JAHLXL010000052.1); JAHLXL010000053 (original name was: JAHLXL010000053.1); JAHLXL010000054 (original name was: JAHLXL010000054.1); JAHLXL010000055 (original name was: JAHLXL010000055.1); JAHLXL010000056 (original name was: JAHLXL010000056.1); JAHLXL010000057 (original name was: JAHLXL010000057.1); JAHLXL010000058 (original name was: JAHLXL010000058.1); JAHLXL010000059 (original name was: JAHLXL010000059.1); JAHLXL010000005 (original name was: JAHLXL010000005.1); JAHLXL010000060 (original name was: JAHLXL010000060.1); JAHLXL010000061 (original name was: JAHLXL010000061.1); JAHLXL010000062 (original name was: JAHLXL010000062.1); JAHLXL010000063 (original name was: JAHLXL010000063.1); JAHLXL010000064 (original name was: JAHLXL010000064.1); JAHLXL010000065 (original name was: JAHLXL010000065.1); JAHLXL010000066 (original name was: JAHLXL010000066.1); JAHLXL010000067 (original name was: JAHLXL010000067.1); JAHLXL010000068 (original name was: JAHLXL010000068.1); JAHLXL010000069 (original name was: JAHLXL010000069.1); JAHLXL010000006 (original name was: JAHLXL010000006.1); JAHLXL010000070 (original name was: JAHLXL010000070.1); JAHLXL010000071 (original name was: JAHLXL010000071.1); JAHLXL010000072 (original name was: JAHLXL010000072.1); JAHLXL010000073 (original name was: JAHLXL010000073.1); JAHLXL010000074 (original name was: JAHLXL010000074.1); JAHLXL010000075 (original name was: JAHLXL010000075.1); JAHLXL010000076 (original name was: JAHLXL010000076.1); JAHLXL010000077 (original name was: JAHLXL010000077.1); JAHLXL010000078 (original name was: JAHLXL010000078.1); JAHLXL010000079 (original name was: JAHLXL010000079.1); JAHLXL010000007 (original name was: JAHLXL010000007.1); JAHLXL010000080 (original name was: JAHLXL010000080.1); JAHLXL010000081 (original name was: JAHLXL010000081.1); JAHLXL010000082 (original name was: JAHLXL010000082.1); JAHLXL010000083 (original name was: JAHLXL010000083.1); JAHLXL010000084 (original name was: JAHLXL010000084.1); JAHLXL010000085 (original name was: JAHLXL010000085.1); JAHLXL010000086 (original name was: JAHLXL010000086.1); JAHLXL010000087 (original name was: JAHLXL010000087.1); JAHLXL010000088 (original name was: JAHLXL010000088.1); JAHLXL010000089 (original name was: JAHLXL010000089.1); JAHLXL010000008 (original name was: JAHLXL010000008.1); JAHLXL010000090 (original name was: JAHLXL010000090.1); JAHLXL010000091 (original name was: JAHLXL010000091.1); JAHLXL010000092 (original name was: JAHLXL010000092.1); JAHLXL010000093 (original name was: JAHLXL010000093.1); JAHLXL010000094 (original name was: JAHLXL010000094.1); JAHLXL010000095 (original name was: JAHLXL010000095.1); JAHLXL010000096 (original name was: JAHLXL010000096.1); JAHLXL010000097 (original name was: JAHLXL010000097.1); JAHLXL010000098 (original name was: JAHLXL010000098.1); JAHLXL010000099 (original name was: JAHLXL010000099.1)

Compact view

c00084_JAHLXL0.. - Region 1 - Pyruvate2acetate-formate

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Location: 49,936 - 73,180 nt. (total: 23,245 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00094_JAHLXL0.. - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 12,634 - 28,550 nt. (total: 15,917 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00172_JAHLXL0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 4,591 - 36,724 nt. (total: 32,134 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.