GCA_019126855.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAHODP010000024 (original name was: JAHODP010000024.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	RRE-containing,lanthipeptide-class-i	16,729	36,857

JAHODP010000029 (original name was: JAHODP010000029.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	lanthipeptide-class-i	1	16,666

Region	Type	From	To	Most similar known cluster	Similarity
Region 16.1	RRE-containing,lanthipeptide-class-i	16,729	36,857
Region 21.1	lanthipeptide-class-i	1	16,666

No secondary metabolite regions were found in these records:: JAHODP010000010 (original name was: JAHODP010000010.1); JAHODP010000011 (original name was: JAHODP010000011.1); JAHODP010000012 (original name was: JAHODP010000012.1); JAHODP010000013 (original name was: JAHODP010000013.1); JAHODP010000014 (original name was: JAHODP010000014.1); JAHODP010000015 (original name was: JAHODP010000015.1); JAHODP010000016 (original name was: JAHODP010000016.1); JAHODP010000017 (original name was: JAHODP010000017.1); JAHODP010000018 (original name was: JAHODP010000018.1); JAHODP010000019 (original name was: JAHODP010000019.1); JAHODP010000001 (original name was: JAHODP010000001.1); JAHODP010000020 (original name was: JAHODP010000020.1); JAHODP010000021 (original name was: JAHODP010000021.1); JAHODP010000022 (original name was: JAHODP010000022.1); JAHODP010000023 (original name was: JAHODP010000023.1); JAHODP010000025 (original name was: JAHODP010000025.1); JAHODP010000026 (original name was: JAHODP010000026.1); JAHODP010000027 (original name was: JAHODP010000027.1); JAHODP010000028 (original name was: JAHODP010000028.1); JAHODP010000002 (original name was: JAHODP010000002.1); JAHODP010000030 (original name was: JAHODP010000030.1); JAHODP010000031 (original name was: JAHODP010000031.1); JAHODP010000032 (original name was: JAHODP010000032.1); JAHODP010000033 (original name was: JAHODP010000033.1); JAHODP010000034 (original name was: JAHODP010000034.1); JAHODP010000035 (original name was: JAHODP010000035.1); JAHODP010000036 (original name was: JAHODP010000036.1); JAHODP010000037 (original name was: JAHODP010000037.1); JAHODP010000038 (original name was: JAHODP010000038.1); JAHODP010000003 (original name was: JAHODP010000003.1); JAHODP010000039 (original name was: JAHODP010000039.1); JAHODP010000040 (original name was: JAHODP010000040.1); JAHODP010000041 (original name was: JAHODP010000041.1); JAHODP010000042 (original name was: JAHODP010000042.1); JAHODP010000043 (original name was: JAHODP010000043.1); JAHODP010000044 (original name was: JAHODP010000044.1); JAHODP010000045 (original name was: JAHODP010000045.1); JAHODP010000046 (original name was: JAHODP010000046.1); JAHODP010000047 (original name was: JAHODP010000047.1); JAHODP010000048 (original name was: JAHODP010000048.1); JAHODP010000004 (original name was: JAHODP010000004.1); JAHODP010000049 (original name was: JAHODP010000049.1); JAHODP010000050 (original name was: JAHODP010000050.1); JAHODP010000005 (original name was: JAHODP010000005.1); JAHODP010000006 (original name was: JAHODP010000006.1); JAHODP010000007 (original name was: JAHODP010000007.1); JAHODP010000008 (original name was: JAHODP010000008.1); JAHODP010000009 (original name was: JAHODP010000009.1)

Compact view

c00016_JAHODP0.. - Region 1 - RRE-containing,lanthipeptide-class-i

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Location: 16,729 - 36,857 nt. (total: 20,129 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])
lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg16_35 - Putative Class I

allorf_29978_30154 leader / core peptide: MNTAILEKPTVDVMDIDLDIDVEDLPVEQIDQ - IRLDhbDhaIDhaLCDhbPGCDhbDhaPNGGDhaGCDhaFCC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

allorf_29978_30154 - Class I

Cleavage pHMM score: -10.80

RODEO score: 26

Monoisotopic mass: 2419.1 Da

Molecular weight: 2420.8 Da

Number of bridges: 5

Alternative weights: (assuming N unmodified Ser/Thr residues); 2438.8 Da N = 1; 2456.8 Da N = 2; 2474.9 Da N = 3

c00021_JAHODP0.. - Region 1 - lanthipeptide-class-i

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Download region SVG

Location: 1 - 16,666 nt. (total: 16,666 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.