GCA_019449715.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAHBRM010000012 (original name was: JAHBRM010000012.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RRE-containing	5,490	26,674

JAHBRM010000021 (original name was: JAHBRM010000021.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RaS-RiPP	10,985	28,944

JAHBRM010000025 (original name was: JAHBRM010000025.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	RaS-RiPP	1	17,081	streptide	RiPP	100%

JAHBRM010000027 (original name was: JAHBRM010000027.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RiPP-like	208,560	214,587

JAHBRM010000028 (original name was: JAHBRM010000028.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	RiPP-like	1	14,181

JAHBRM010000005 (original name was: JAHBRM010000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	NRPS-like	1	37,996	asukamycin	Polyketide:Type II	4%

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	RRE-containing	5,490	26,674
Region 14.1	RaS-RiPP	10,985	28,944
Region 18.1	RaS-RiPP	1	17,081	streptide	RiPP	100%
Region 20.1	RiPP-like	208,560	214,587
Region 21.1	RiPP-like	1	14,181
Region 37.1	NRPS-like	1	37,996	asukamycin	Polyketide:Type II	4%

No secondary metabolite regions were found in these records:: JAHBRM010000001 (original name was: JAHBRM010000001.1); JAHBRM010000010 (original name was: JAHBRM010000010.1); JAHBRM010000011 (original name was: JAHBRM010000011.1); JAHBRM010000013 (original name was: JAHBRM010000013.1); JAHBRM010000014 (original name was: JAHBRM010000014.1); JAHBRM010000015 (original name was: JAHBRM010000015.1); JAHBRM010000016 (original name was: JAHBRM010000016.1); JAHBRM010000017 (original name was: JAHBRM010000017.1); JAHBRM010000018 (original name was: JAHBRM010000018.1); JAHBRM010000019 (original name was: JAHBRM010000019.1); JAHBRM010000002 (original name was: JAHBRM010000002.1); JAHBRM010000020 (original name was: JAHBRM010000020.1); JAHBRM010000022 (original name was: JAHBRM010000022.1); JAHBRM010000023 (original name was: JAHBRM010000023.1); JAHBRM010000024 (original name was: JAHBRM010000024.1); JAHBRM010000026 (original name was: JAHBRM010000026.1); JAHBRM010000029 (original name was: JAHBRM010000029.1); JAHBRM010000003 (original name was: JAHBRM010000003.1); JAHBRM010000030 (original name was: JAHBRM010000030.1); JAHBRM010000031 (original name was: JAHBRM010000031.1); JAHBRM010000032 (original name was: JAHBRM010000032.1); JAHBRM010000033 (original name was: JAHBRM010000033.1); JAHBRM010000034 (original name was: JAHBRM010000034.1); JAHBRM010000035 (original name was: JAHBRM010000035.1); JAHBRM010000036 (original name was: JAHBRM010000036.1); JAHBRM010000037 (original name was: JAHBRM010000037.1); JAHBRM010000038 (original name was: JAHBRM010000038.1); JAHBRM010000039 (original name was: JAHBRM010000039.1); JAHBRM010000004 (original name was: JAHBRM010000004.1); JAHBRM010000040 (original name was: JAHBRM010000040.1); JAHBRM010000041 (original name was: JAHBRM010000041.1); JAHBRM010000006 (original name was: JAHBRM010000006.1); JAHBRM010000007 (original name was: JAHBRM010000007.1); JAHBRM010000008 (original name was: JAHBRM010000008.1); JAHBRM010000009 (original name was: JAHBRM010000009.1)

Compact view

c00004_JAHBRM0.. - Region 1 - RRE-containing

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Location: 5,490 - 26,674 nt. (total: 21,185 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00014_JAHBRM0.. - Region 1 - RaS-RiPP

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Location: 10,985 - 28,944 nt. (total: 17,960 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00018_JAHBRM0.. - Region 1 - RaS-RiPP

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Location: 1 - 17,081 nt. (total: 17,081 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00020_JAHBRM0.. - Region 1 - RiPP-like

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Location: 208,560 - 214,587 nt. (total: 6,028 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00021_JAHBRM0.. - Region 1 - RiPP-like

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Location: 1 - 14,181 nt. (total: 14,181 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00037_JAHBRM0.. - Region 1 - NRPS-like

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Location: 1 - 37,996 nt. (total: 37,996 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

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Similar known gene clusters