GCA_019449795.1 - 7 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAHBRL010000010 (original name was: JAHBRL010000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RRE-containing	1	20,305

JAHBRL010000016 (original name was: JAHBRL010000016.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	RaS-RiPP	26,672	49,901

JAHBRL010000025 (original name was: JAHBRL010000025.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	RaS-RiPP	1	17,082	streptide	RiPP	100%

JAHBRL010000003 (original name was: JAHBRL010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	lanthipeptide-class-i	26,306	50,359	lactocin S	RiPP:Lanthipeptide	10%

JAHBRL010000030 (original name was: JAHBRL010000030.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	RiPP-like	1	14,182

JAHBRL010000035 (original name was: JAHBRL010000035.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	RaS-RiPP,lanthipeptide-class-iv	1	18,286

JAHBRL010000005 (original name was: JAHBRL010000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	NRPS-like	30,305	69,694	asukamycin	Polyketide:Type II	4%

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RRE-containing	1	20,305
Region 8.1	RaS-RiPP	26,672	49,901
Region 18.1	RaS-RiPP	1	17,082	streptide	RiPP	100%
Region 23.1	lanthipeptide-class-i	26,306	50,359	lactocin S	RiPP:Lanthipeptide	10%
Region 24.1	RiPP-like	1	14,182
Region 29.1	RaS-RiPP,lanthipeptide-class-iv	1	18,286
Region 35.1	NRPS-like	30,305	69,694	asukamycin	Polyketide:Type II	4%

No secondary metabolite regions were found in these records:: JAHBRL010000001 (original name was: JAHBRL010000001.1); JAHBRL010000011 (original name was: JAHBRL010000011.1); JAHBRL010000012 (original name was: JAHBRL010000012.1); JAHBRL010000013 (original name was: JAHBRL010000013.1); JAHBRL010000014 (original name was: JAHBRL010000014.1); JAHBRL010000015 (original name was: JAHBRL010000015.1); JAHBRL010000017 (original name was: JAHBRL010000017.1); JAHBRL010000018 (original name was: JAHBRL010000018.1); JAHBRL010000019 (original name was: JAHBRL010000019.1); JAHBRL010000002 (original name was: JAHBRL010000002.1); JAHBRL010000020 (original name was: JAHBRL010000020.1); JAHBRL010000021 (original name was: JAHBRL010000021.1); JAHBRL010000022 (original name was: JAHBRL010000022.1); JAHBRL010000023 (original name was: JAHBRL010000023.1); JAHBRL010000024 (original name was: JAHBRL010000024.1); JAHBRL010000026 (original name was: JAHBRL010000026.1); JAHBRL010000027 (original name was: JAHBRL010000027.1); JAHBRL010000028 (original name was: JAHBRL010000028.1); JAHBRL010000029 (original name was: JAHBRL010000029.1); JAHBRL010000031 (original name was: JAHBRL010000031.1); JAHBRL010000032 (original name was: JAHBRL010000032.1); JAHBRL010000033 (original name was: JAHBRL010000033.1); JAHBRL010000034 (original name was: JAHBRL010000034.1); JAHBRL010000036 (original name was: JAHBRL010000036.1); JAHBRL010000037 (original name was: JAHBRL010000037.1); JAHBRL010000038 (original name was: JAHBRL010000038.1); JAHBRL010000039 (original name was: JAHBRL010000039.1); JAHBRL010000004 (original name was: JAHBRL010000004.1); JAHBRL010000006 (original name was: JAHBRL010000006.1); JAHBRL010000007 (original name was: JAHBRL010000007.1); JAHBRL010000008 (original name was: JAHBRL010000008.1); JAHBRL010000009 (original name was: JAHBRL010000009.1)

Compact view

c00002_JAHBRL0.. - Region 1 - RRE-containing

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Location: 1 - 20,305 nt. (total: 20,305 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00008_JAHBRL0.. - Region 1 - RaS-RiPP

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Location: 26,672 - 49,901 nt. (total: 23,230 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00018_JAHBRL0.. - Region 1 - RaS-RiPP

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Location: 1 - 17,082 nt. (total: 17,082 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00023_JAHBRL0.. - Region 1 - lanthipeptide-class-i

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Location: 26,306 - 50,359 nt. (total: 24,054 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

Lanthipeptides

Core peptide predictions

No core peptides found.

c00024_JAHBRL0.. - Region 1 - RiPP-like

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Location: 1 - 14,182 nt. (total: 14,182 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00029_JAHBRL0.. - Region 1 - RaS-RiPP,lanthipeptide-class-iv

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Location: 1 - 18,286 nt. (total: 18,286 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)
lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00035_JAHBRL0.. - Region 1 - NRPS-like

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Location: 30,305 - 69,694 nt. (total: 39,390 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters