GCA_019449955.1 - 1 region(s) - gutSMASH results

Identified primary metabolite regions

JAHDUT010000027 (original name was: JAHDUT010000027.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 20.1	TPP_AA_metabolism	Putative	42,958	72,964

No primary metabolite regions were found in these records:: JAHDUT010000001 (original name was: JAHDUT010000001.1); JAHDUT010000010 (original name was: JAHDUT010000010.1); JAHDUT010000011 (original name was: JAHDUT010000011.1); JAHDUT010000012 (original name was: JAHDUT010000012.1); JAHDUT010000013 (original name was: JAHDUT010000013.1); JAHDUT010000014 (original name was: JAHDUT010000014.1); JAHDUT010000015 (original name was: JAHDUT010000015.1); JAHDUT010000016 (original name was: JAHDUT010000016.1); JAHDUT010000017 (original name was: JAHDUT010000017.1); JAHDUT010000018 (original name was: JAHDUT010000018.1); JAHDUT010000019 (original name was: JAHDUT010000019.1); JAHDUT010000002 (original name was: JAHDUT010000002.1); JAHDUT010000020 (original name was: JAHDUT010000020.1); JAHDUT010000021 (original name was: JAHDUT010000021.1); JAHDUT010000022 (original name was: JAHDUT010000022.1); JAHDUT010000023 (original name was: JAHDUT010000023.1); JAHDUT010000024 (original name was: JAHDUT010000024.1); JAHDUT010000025 (original name was: JAHDUT010000025.1); JAHDUT010000026 (original name was: JAHDUT010000026.1); JAHDUT010000028 (original name was: JAHDUT010000028.1); JAHDUT010000029 (original name was: JAHDUT010000029.1); JAHDUT010000003 (original name was: JAHDUT010000003.1); JAHDUT010000030 (original name was: JAHDUT010000030.1); JAHDUT010000031 (original name was: JAHDUT010000031.1); JAHDUT010000032 (original name was: JAHDUT010000032.1); JAHDUT010000033 (original name was: JAHDUT010000033.1); JAHDUT010000034 (original name was: JAHDUT010000034.1); JAHDUT010000004 (original name was: JAHDUT010000004.1); JAHDUT010000005 (original name was: JAHDUT010000005.1); JAHDUT010000006 (original name was: JAHDUT010000006.1); JAHDUT010000007 (original name was: JAHDUT010000007.1); JAHDUT010000008 (original name was: JAHDUT010000008.1); JAHDUT010000009 (original name was: JAHDUT010000009.1)

Compact view

c00020_JAHDUT0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 42,958 - 72,964 nt. (total: 30,007 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.