GCA_019450115.1 - 8 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAHRBF010000017 (original name was: JAHRBF010000017.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RaS-RiPP	33,450	51,617

JAHRBF010000002 (original name was: JAHRBF010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	lanthipeptide-class-i	22,510	46,563

JAHRBF010000022 (original name was: JAHRBF010000022.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	RaS-RiPP	1,647	14,505	streptide	RiPP	100%
Region 15.2	RaS-RiPP	155,994	178,285
Region 15.3	RiPP-like	272,634	291,581

JAHRBF010000004 (original name was: JAHRBF010000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	lanthipeptide-class-iv	1	13,760
Region 25.2	NRPS-like	140,517	183,408	asukamycin	Polyketide:Type II	4%

JAHRBF010000009 (original name was: JAHRBF010000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	RRE-containing	344	20,835

Region	Type	From	To	Most similar known cluster	Similarity
Region 9.1	RaS-RiPP	33,450	51,617
Region 12.1	lanthipeptide-class-i	22,510	46,563
Region 15.1	RaS-RiPP	1,647	14,505	streptide	RiPP	100%
Region 15.2	RaS-RiPP	155,994	178,285
Region 15.3	RiPP-like	272,634	291,581
Region 25.1	lanthipeptide-class-iv	1	13,760
Region 25.2	NRPS-like	140,517	183,408	asukamycin	Polyketide:Type II	4%
Region 30.1	RRE-containing	344	20,835

No secondary metabolite regions were found in these records:: JAHRBF010000001 (original name was: JAHRBF010000001.1); JAHRBF010000010 (original name was: JAHRBF010000010.1); JAHRBF010000011 (original name was: JAHRBF010000011.1); JAHRBF010000012 (original name was: JAHRBF010000012.1); JAHRBF010000013 (original name was: JAHRBF010000013.1); JAHRBF010000014 (original name was: JAHRBF010000014.1); JAHRBF010000015 (original name was: JAHRBF010000015.1); JAHRBF010000016 (original name was: JAHRBF010000016.1); JAHRBF010000018 (original name was: JAHRBF010000018.1); JAHRBF010000019 (original name was: JAHRBF010000019.1); JAHRBF010000020 (original name was: JAHRBF010000020.1); JAHRBF010000021 (original name was: JAHRBF010000021.1); JAHRBF010000023 (original name was: JAHRBF010000023.1); JAHRBF010000024 (original name was: JAHRBF010000024.1); JAHRBF010000025 (original name was: JAHRBF010000025.1); JAHRBF010000026 (original name was: JAHRBF010000026.1); JAHRBF010000027 (original name was: JAHRBF010000027.1); JAHRBF010000028 (original name was: JAHRBF010000028.1); JAHRBF010000029 (original name was: JAHRBF010000029.1); JAHRBF010000003 (original name was: JAHRBF010000003.1); JAHRBF010000030 (original name was: JAHRBF010000030.1); JAHRBF010000005 (original name was: JAHRBF010000005.1); JAHRBF010000006 (original name was: JAHRBF010000006.1); JAHRBF010000007 (original name was: JAHRBF010000007.1); JAHRBF010000008 (original name was: JAHRBF010000008.1)

Compact view

c00009_JAHRBF0.. - Region 1 - RaS-RiPP

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Location: 33,450 - 51,617 nt. (total: 18,168 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00012_JAHRBF0.. - Region 1 - lanthipeptide-class-i

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Location: 22,510 - 46,563 nt. (total: 24,054 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00015_JAHRBF0.. - Region 1 - RaS-RiPP

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Location: 1,647 - 14,505 nt. (total: 12,859 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00015_JAHRBF0.. - Region 2 - RaS-RiPP

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Location: 155,994 - 178,285 nt. (total: 22,292 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00015_JAHRBF0.. - Region 3 - RiPP-like

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Location: 272,634 - 291,581 nt. (total: 18,948 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00025_JAHRBF0.. - Region 1 - lanthipeptide-class-iv

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Location: 1 - 13,760 nt. (total: 13,760 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00025_JAHRBF0.. - Region 2 - NRPS-like

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Location: 140,517 - 183,408 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

c00030_JAHRBF0.. - Region 1 - RRE-containing

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Location: 344 - 20,835 nt. (total: 20,492 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.