GCA_019990865.1 - 2 region(s)

Identified primary metabolite regions

JAIPUN010000033 (original name was: JAIPUN010000033.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 26.1	Pyruvate2acetate-formate	SCFA	87,332	110,576	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JAIPUN010000063 (original name was: JAIPUN010000063.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 43.1	TPP_fatty_acids	Putative	26,177	47,496

No primary metabolite regions were found in these records:: JAIPUN010000001 (original name was: JAIPUN010000001.1); JAIPUN010000002 (original name was: JAIPUN010000002.1); JAIPUN010000003 (original name was: JAIPUN010000003.1); JAIPUN010000004 (original name was: JAIPUN010000004.1); JAIPUN010000005 (original name was: JAIPUN010000005.1); JAIPUN010000006 (original name was: JAIPUN010000006.1); JAIPUN010000007 (original name was: JAIPUN010000007.1); JAIPUN010000009 (original name was: JAIPUN010000009.1); JAIPUN010000010 (original name was: JAIPUN010000010.1); JAIPUN010000011 (original name was: JAIPUN010000011.1); JAIPUN010000012 (original name was: JAIPUN010000012.1); JAIPUN010000014 (original name was: JAIPUN010000014.1); JAIPUN010000016 (original name was: JAIPUN010000016.1); JAIPUN010000017 (original name was: JAIPUN010000017.1); JAIPUN010000018 (original name was: JAIPUN010000018.1); JAIPUN010000019 (original name was: JAIPUN010000019.1); JAIPUN010000020 (original name was: JAIPUN010000020.1); JAIPUN010000021 (original name was: JAIPUN010000021.1); JAIPUN010000022 (original name was: JAIPUN010000022.1); JAIPUN010000024 (original name was: JAIPUN010000024.1); JAIPUN010000025 (original name was: JAIPUN010000025.1); JAIPUN010000026 (original name was: JAIPUN010000026.1); JAIPUN010000027 (original name was: JAIPUN010000027.1); JAIPUN010000028 (original name was: JAIPUN010000028.1); JAIPUN010000029 (original name was: JAIPUN010000029.1); JAIPUN010000035 (original name was: JAIPUN010000035.1); JAIPUN010000042 (original name was: JAIPUN010000042.1); JAIPUN010000046 (original name was: JAIPUN010000046.1); JAIPUN010000050 (original name was: JAIPUN010000050.1); JAIPUN010000051 (original name was: JAIPUN010000051.1); JAIPUN010000052 (original name was: JAIPUN010000052.1); JAIPUN010000053 (original name was: JAIPUN010000053.1); JAIPUN010000054 (original name was: JAIPUN010000054.1); JAIPUN010000055 (original name was: JAIPUN010000055.1); JAIPUN010000056 (original name was: JAIPUN010000056.1); JAIPUN010000057 (original name was: JAIPUN010000057.1); JAIPUN010000058 (original name was: JAIPUN010000058.1); JAIPUN010000059 (original name was: JAIPUN010000059.1); JAIPUN010000060 (original name was: JAIPUN010000060.1); JAIPUN010000061 (original name was: JAIPUN010000061.1); JAIPUN010000062 (original name was: JAIPUN010000062.1); JAIPUN010000068 (original name was: JAIPUN010000068.1); JAIPUN010000069 (original name was: JAIPUN010000069.1); JAIPUN010000070 (original name was: JAIPUN010000070.1); JAIPUN010000071 (original name was: JAIPUN010000071.1); JAIPUN010000072 (original name was: JAIPUN010000072.1); JAIPUN010000074 (original name was: JAIPUN010000074.1); JAIPUN010000075 (original name was: JAIPUN010000075.1); JAIPUN010000076 (original name was: JAIPUN010000076.1); JAIPUN010000077 (original name was: JAIPUN010000077.1); JAIPUN010000078 (original name was: JAIPUN010000078.1); JAIPUN010000079 (original name was: JAIPUN010000079.1); JAIPUN010000080 (original name was: JAIPUN010000080.1); JAIPUN010000081 (original name was: JAIPUN010000081.1); JAIPUN010000083 (original name was: JAIPUN010000083.1); JAIPUN010000084 (original name was: JAIPUN010000084.1); JAIPUN010000085 (original name was: JAIPUN010000085.1); JAIPUN010000086 (original name was: JAIPUN010000086.1); JAIPUN010000087 (original name was: JAIPUN010000087.1); JAIPUN010000088 (original name was: JAIPUN010000088.1); JAIPUN010000089 (original name was: JAIPUN010000089.1); JAIPUN010000090 (original name was: JAIPUN010000090.1); JAIPUN010000091 (original name was: JAIPUN010000091.1); JAIPUN010000092 (original name was: JAIPUN010000092.1); JAIPUN010000093 (original name was: JAIPUN010000093.1); JAIPUN010000094 (original name was: JAIPUN010000094.1); JAIPUN010000095 (original name was: JAIPUN010000095.1); JAIPUN010000096 (original name was: JAIPUN010000096.1); JAIPUN010000097 (original name was: JAIPUN010000097.1); JAIPUN010000098 (original name was: JAIPUN010000098.1); JAIPUN010000099 (original name was: JAIPUN010000099.1); JAIPUN010000100 (original name was: JAIPUN010000100.1); JAIPUN010000101 (original name was: JAIPUN010000101.1); JAIPUN010000102 (original name was: JAIPUN010000102.1); JAIPUN010000103 (original name was: JAIPUN010000103.1); JAIPUN010000104 (original name was: JAIPUN010000104.1); JAIPUN010000105 (original name was: JAIPUN010000105.1); JAIPUN010000106 (original name was: JAIPUN010000106.1); JAIPUN010000109 (original name was: JAIPUN010000109.1); JAIPUN010000110 (original name was: JAIPUN010000110.1); JAIPUN010000111 (original name was: JAIPUN010000111.1); JAIPUN010000112 (original name was: JAIPUN010000112.1); JAIPUN010000113 (original name was: JAIPUN010000113.1); JAIPUN010000114 (original name was: JAIPUN010000114.1); JAIPUN010000115 (original name was: JAIPUN010000115.1); JAIPUN010000116 (original name was: JAIPUN010000116.1); JAIPUN010000117 (original name was: JAIPUN010000117.1); JAIPUN010000118 (original name was: JAIPUN010000118.1); JAIPUN010000119 (original name was: JAIPUN010000119.1); JAIPUN010000121 (original name was: JAIPUN010000121.1); JAIPUN010000124 (original name was: JAIPUN010000124.1); JAIPUN010000125 (original name was: JAIPUN010000125.1); JAIPUN010000126 (original name was: JAIPUN010000126.1); JAIPUN010000127 (original name was: JAIPUN010000127.1); JAIPUN010000128 (original name was: JAIPUN010000128.1); JAIPUN010000129 (original name was: JAIPUN010000129.1); JAIPUN010000130 (original name was: JAIPUN010000130.1); JAIPUN010000131 (original name was: JAIPUN010000131.1); JAIPUN010000132 (original name was: JAIPUN010000132.1); JAIPUN010000133 (original name was: JAIPUN010000133.1); JAIPUN010000134 (original name was: JAIPUN010000134.1); JAIPUN010000135 (original name was: JAIPUN010000135.1); JAIPUN010000136 (original name was: JAIPUN010000136.1); JAIPUN010000137 (original name was: JAIPUN010000137.1); JAIPUN010000138 (original name was: JAIPUN010000138.1)

Compact view

c00026_JAIPUN0.. - Region 1 - Pyruvate2acetate-formate

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Location: 87,332 - 110,576 nt. (total: 23,245 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00043_JAIPUN0.. - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 26,177 - 47,496 nt. (total: 21,320 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.