GCA_019997305.1 - 12 region(s)

Identified primary metabolite regions

JAIFZJ010000010 (original name was: JAIFZJ010000010.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 11.1	fatty_acids-unassigned	Putative	46,457	93,964

JAIFZJ010000013 (original name was: JAIFZJ010000013.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 44.1	Fumarate2succinate	SCFA	2,288	24,809	Acetate to butyrate C. sporogenes	BUT	33%

JAIFZJ010000017 (original name was: JAIFZJ010000017.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 88.1	fatty_acids-unassigned	Putative	1	39,996

JAIFZJ010000023 (original name was: JAIFZJ010000023.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 95.1	histidine2glutamate_hutHGIU_operon	Other	6,792	32,204	Histidine to glutamate K. pneumoniae	GLU	60%

JAIFZJ010000024 (original name was: JAIFZJ010000024.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 96.1	fatty_acids-unassigned	Putative	1	53,656

JAIFZJ010000002 (original name was: JAIFZJ010000002.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 102.1	hydroxybenzoate2phenol	Aromatic	66,497	88,499	hydroxybenzoate2phenol K. pneumoniae	PHE	100%

JAIFZJ010000003 (original name was: JAIFZJ010000003.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 113.1	Putrescine2spermidine	Aliphatic_amine	133,417	145,310	Arginine degradation C. sticklandii	ARG	22%

JAIFZJ010000041 (original name was: JAIFZJ010000041.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 115.1	fatty_acids-unassigned	Putative	1	16,776	Acetate to butyrate C. sporogenes	BUT	33%

JAIFZJ010000051 (original name was: JAIFZJ010000051.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 126.1	fatty_acids-unassigned	Putative	1	23,214

JAIFZJ010000063 (original name was: JAIFZJ010000063.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 139.1	Nitrate_reductase	E-MGC	1	17,037	Nitrate reductase E. coli	NIR	60%

JAIFZJ010000006 (original name was: JAIFZJ010000006.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 146.1	fatty_acids-unassigned	Putative	6,932	30,148	Acetate to butyrate C. sporogenes	BUT	50%

JAIFZJ010000008 (original name was: JAIFZJ010000008.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 168.1	TPP_AA_metabolism	Putative	86,828	100,647

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 11.1	fatty_acids-unassigned	Putative	46,457	93,964
Region 44.1	Fumarate2succinate	SCFA	2,288	24,809	Acetate to butyrate C. sporogenes	BUT	33%
Region 88.1	fatty_acids-unassigned	Putative	1	39,996
Region 95.1	histidine2glutamate_hutHGIU_operon	Other	6,792	32,204	Histidine to glutamate K. pneumoniae	GLU	60%
Region 96.1	fatty_acids-unassigned	Putative	1	53,656
Region 102.1	hydroxybenzoate2phenol	Aromatic	66,497	88,499	hydroxybenzoate2phenol K. pneumoniae	PHE	100%
Region 113.1	Putrescine2spermidine	Aliphatic_amine	133,417	145,310	Arginine degradation C. sticklandii	ARG	22%
Region 115.1	fatty_acids-unassigned	Putative	1	16,776	Acetate to butyrate C. sporogenes	BUT	33%
Region 126.1	fatty_acids-unassigned	Putative	1	23,214
Region 139.1	Nitrate_reductase	E-MGC	1	17,037	Nitrate reductase E. coli	NIR	60%
Region 146.1	fatty_acids-unassigned	Putative	6,932	30,148	Acetate to butyrate C. sporogenes	BUT	50%
Region 168.1	TPP_AA_metabolism	Putative	86,828	100,647

No primary metabolite regions were found in these records:: JAIFZJ010000100 (original name was: JAIFZJ010000100.1); JAIFZJ010000101 (original name was: JAIFZJ010000101.1); JAIFZJ010000102 (original name was: JAIFZJ010000102.1); JAIFZJ010000103 (original name was: JAIFZJ010000103.1); JAIFZJ010000104 (original name was: JAIFZJ010000104.1); JAIFZJ010000105 (original name was: JAIFZJ010000105.1); JAIFZJ010000106 (original name was: JAIFZJ010000106.1); JAIFZJ010000107 (original name was: JAIFZJ010000107.1); JAIFZJ010000108 (original name was: JAIFZJ010000108.1); JAIFZJ010000109 (original name was: JAIFZJ010000109.1); JAIFZJ010000110 (original name was: JAIFZJ010000110.1); JAIFZJ010000111 (original name was: JAIFZJ010000111.1); JAIFZJ010000112 (original name was: JAIFZJ010000112.1); JAIFZJ010000113 (original name was: JAIFZJ010000113.1); JAIFZJ010000114 (original name was: JAIFZJ010000114.1); JAIFZJ010000115 (original name was: JAIFZJ010000115.1); JAIFZJ010000116 (original name was: JAIFZJ010000116.1); JAIFZJ010000117 (original name was: JAIFZJ010000117.1); JAIFZJ010000118 (original name was: JAIFZJ010000118.1); JAIFZJ010000119 (original name was: JAIFZJ010000119.1); JAIFZJ010000011 (original name was: JAIFZJ010000011.1); JAIFZJ010000120 (original name was: JAIFZJ010000120.1); JAIFZJ010000121 (original name was: JAIFZJ010000121.1); JAIFZJ010000122 (original name was: JAIFZJ010000122.1); JAIFZJ010000123 (original name was: JAIFZJ010000123.1); JAIFZJ010000124 (original name was: JAIFZJ010000124.1); JAIFZJ010000125 (original name was: JAIFZJ010000125.1); JAIFZJ010000126 (original name was: JAIFZJ010000126.1); JAIFZJ010000127 (original name was: JAIFZJ010000127.1); JAIFZJ010000128 (original name was: JAIFZJ010000128.1); JAIFZJ010000129 (original name was: JAIFZJ010000129.1); JAIFZJ010000012 (original name was: JAIFZJ010000012.1); JAIFZJ010000130 (original name was: JAIFZJ010000130.1); JAIFZJ010000131 (original name was: JAIFZJ010000131.1); JAIFZJ010000132 (original name was: JAIFZJ010000132.1); JAIFZJ010000133 (original name was: JAIFZJ010000133.1); JAIFZJ010000134 (original name was: JAIFZJ010000134.1); JAIFZJ010000135 (original name was: JAIFZJ010000135.1); JAIFZJ010000136 (original name was: JAIFZJ010000136.1); JAIFZJ010000137 (original name was: JAIFZJ010000137.1); JAIFZJ010000138 (original name was: JAIFZJ010000138.1); JAIFZJ010000139 (original name was: JAIFZJ010000139.1); JAIFZJ010000140 (original name was: JAIFZJ010000140.1); JAIFZJ010000141 (original name was: JAIFZJ010000141.1); JAIFZJ010000142 (original name was: JAIFZJ010000142.1); JAIFZJ010000143 (original name was: JAIFZJ010000143.1); JAIFZJ010000144 (original name was: JAIFZJ010000144.1); JAIFZJ010000145 (original name was: JAIFZJ010000145.1); JAIFZJ010000146 (original name was: JAIFZJ010000146.1); JAIFZJ010000147 (original name was: JAIFZJ010000147.1); JAIFZJ010000148 (original name was: JAIFZJ010000148.1); JAIFZJ010000149 (original name was: JAIFZJ010000149.1); JAIFZJ010000014 (original name was: JAIFZJ010000014.1); JAIFZJ010000150 (original name was: JAIFZJ010000150.1); JAIFZJ010000151 (original name was: JAIFZJ010000151.1); JAIFZJ010000152 (original name was: JAIFZJ010000152.1); JAIFZJ010000153 (original name was: JAIFZJ010000153.1); JAIFZJ010000154 (original name was: JAIFZJ010000154.1); JAIFZJ010000155 (original name was: JAIFZJ010000155.1); JAIFZJ010000156 (original name was: JAIFZJ010000156.1); JAIFZJ010000157 (original name was: JAIFZJ010000157.1); JAIFZJ010000158 (original name was: JAIFZJ010000158.1); JAIFZJ010000159 (original name was: JAIFZJ010000159.1); JAIFZJ010000015 (original name was: JAIFZJ010000015.1); JAIFZJ010000160 (original name was: JAIFZJ010000160.1); JAIFZJ010000161 (original name was: JAIFZJ010000161.1); JAIFZJ010000162 (original name was: JAIFZJ010000162.1); JAIFZJ010000163 (original name was: JAIFZJ010000163.1); JAIFZJ010000164 (original name was: JAIFZJ010000164.1); JAIFZJ010000165 (original name was: JAIFZJ010000165.1); JAIFZJ010000166 (original name was: JAIFZJ010000166.1); JAIFZJ010000167 (original name was: JAIFZJ010000167.1); JAIFZJ010000168 (original name was: JAIFZJ010000168.1); JAIFZJ010000169 (original name was: JAIFZJ010000169.1); JAIFZJ010000016 (original name was: JAIFZJ010000016.1); JAIFZJ010000170 (original name was: JAIFZJ010000170.1); JAIFZJ010000171 (original name was: JAIFZJ010000171.1); JAIFZJ010000172 (original name was: JAIFZJ010000172.1); JAIFZJ010000173 (original name was: JAIFZJ010000173.1); JAIFZJ010000174 (original name was: JAIFZJ010000174.1); JAIFZJ010000175 (original name was: JAIFZJ010000175.1); JAIFZJ010000176 (original name was: JAIFZJ010000176.1); JAIFZJ010000177 (original name was: JAIFZJ010000177.1); JAIFZJ010000178 (original name was: JAIFZJ010000178.1); JAIFZJ010000179 (original name was: JAIFZJ010000179.1); JAIFZJ010000018 (original name was: JAIFZJ010000018.1); JAIFZJ010000019 (original name was: JAIFZJ010000019.1); JAIFZJ010000001 (original name was: JAIFZJ010000001.1); JAIFZJ010000020 (original name was: JAIFZJ010000020.1); JAIFZJ010000021 (original name was: JAIFZJ010000021.1); JAIFZJ010000022 (original name was: JAIFZJ010000022.1); JAIFZJ010000025 (original name was: JAIFZJ010000025.1); JAIFZJ010000026 (original name was: JAIFZJ010000026.1); JAIFZJ010000027 (original name was: JAIFZJ010000027.1); JAIFZJ010000028 (original name was: JAIFZJ010000028.1); JAIFZJ010000029 (original name was: JAIFZJ010000029.1); JAIFZJ010000030 (original name was: JAIFZJ010000030.1); JAIFZJ010000031 (original name was: JAIFZJ010000031.1); JAIFZJ010000032 (original name was: JAIFZJ010000032.1); JAIFZJ010000033 (original name was: JAIFZJ010000033.1); JAIFZJ010000034 (original name was: JAIFZJ010000034.1); JAIFZJ010000035 (original name was: JAIFZJ010000035.1); JAIFZJ010000036 (original name was: JAIFZJ010000036.1); JAIFZJ010000037 (original name was: JAIFZJ010000037.1); JAIFZJ010000038 (original name was: JAIFZJ010000038.1); JAIFZJ010000039 (original name was: JAIFZJ010000039.1); JAIFZJ010000040 (original name was: JAIFZJ010000040.1); JAIFZJ010000042 (original name was: JAIFZJ010000042.1); JAIFZJ010000043 (original name was: JAIFZJ010000043.1); JAIFZJ010000044 (original name was: JAIFZJ010000044.1); JAIFZJ010000045 (original name was: JAIFZJ010000045.1); JAIFZJ010000046 (original name was: JAIFZJ010000046.1); JAIFZJ010000047 (original name was: JAIFZJ010000047.1); JAIFZJ010000048 (original name was: JAIFZJ010000048.1); JAIFZJ010000049 (original name was: JAIFZJ010000049.1); JAIFZJ010000004 (original name was: JAIFZJ010000004.1); JAIFZJ010000050 (original name was: JAIFZJ010000050.1); JAIFZJ010000052 (original name was: JAIFZJ010000052.1); JAIFZJ010000053 (original name was: JAIFZJ010000053.1); JAIFZJ010000054 (original name was: JAIFZJ010000054.1); JAIFZJ010000055 (original name was: JAIFZJ010000055.1); JAIFZJ010000056 (original name was: JAIFZJ010000056.1); JAIFZJ010000057 (original name was: JAIFZJ010000057.1); JAIFZJ010000058 (original name was: JAIFZJ010000058.1); JAIFZJ010000059 (original name was: JAIFZJ010000059.1); JAIFZJ010000005 (original name was: JAIFZJ010000005.1); JAIFZJ010000060 (original name was: JAIFZJ010000060.1); JAIFZJ010000061 (original name was: JAIFZJ010000061.1); JAIFZJ010000062 (original name was: JAIFZJ010000062.1); JAIFZJ010000064 (original name was: JAIFZJ010000064.1); JAIFZJ010000065 (original name was: JAIFZJ010000065.1); JAIFZJ010000066 (original name was: JAIFZJ010000066.1); JAIFZJ010000067 (original name was: JAIFZJ010000067.1); JAIFZJ010000068 (original name was: JAIFZJ010000068.1); JAIFZJ010000069 (original name was: JAIFZJ010000069.1); JAIFZJ010000070 (original name was: JAIFZJ010000070.1); JAIFZJ010000071 (original name was: JAIFZJ010000071.1); JAIFZJ010000072 (original name was: JAIFZJ010000072.1); JAIFZJ010000073 (original name was: JAIFZJ010000073.1); JAIFZJ010000074 (original name was: JAIFZJ010000074.1); JAIFZJ010000075 (original name was: JAIFZJ010000075.1); JAIFZJ010000076 (original name was: JAIFZJ010000076.1); JAIFZJ010000077 (original name was: JAIFZJ010000077.1); JAIFZJ010000078 (original name was: JAIFZJ010000078.1); JAIFZJ010000079 (original name was: JAIFZJ010000079.1); JAIFZJ010000007 (original name was: JAIFZJ010000007.1); JAIFZJ010000080 (original name was: JAIFZJ010000080.1); JAIFZJ010000081 (original name was: JAIFZJ010000081.1); JAIFZJ010000082 (original name was: JAIFZJ010000082.1); JAIFZJ010000083 (original name was: JAIFZJ010000083.1); JAIFZJ010000084 (original name was: JAIFZJ010000084.1); JAIFZJ010000085 (original name was: JAIFZJ010000085.1); JAIFZJ010000086 (original name was: JAIFZJ010000086.1); JAIFZJ010000087 (original name was: JAIFZJ010000087.1); JAIFZJ010000088 (original name was: JAIFZJ010000088.1); JAIFZJ010000089 (original name was: JAIFZJ010000089.1); JAIFZJ010000090 (original name was: JAIFZJ010000090.1); JAIFZJ010000091 (original name was: JAIFZJ010000091.1); JAIFZJ010000092 (original name was: JAIFZJ010000092.1); JAIFZJ010000093 (original name was: JAIFZJ010000093.1); JAIFZJ010000094 (original name was: JAIFZJ010000094.1); JAIFZJ010000095 (original name was: JAIFZJ010000095.1); JAIFZJ010000096 (original name was: JAIFZJ010000096.1); JAIFZJ010000097 (original name was: JAIFZJ010000097.1); JAIFZJ010000098 (original name was: JAIFZJ010000098.1); JAIFZJ010000099 (original name was: JAIFZJ010000099.1); JAIFZJ010000009 (original name was: JAIFZJ010000009.1)

Compact view

c00011_JAIFZJ0.. - Region 1 - fatty_acids-unassigned

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Location: 46,457 - 93,964 nt. (total: 47,508 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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No matches found.

c00044_JAIFZJ0.. - Region 1 - Fumarate2succinate

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Location: 2,288 - 24,809 nt. (total: 22,522 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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c00088_JAIFZJ0.. - Region 1 - fatty_acids-unassigned

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Location: 1 - 39,996 nt. (total: 39,996 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00095_JAIFZJ0.. - Region 1 - histidine2glutamate_hutHGIU_operon

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Location: 6,792 - 32,204 nt. (total: 25,413 nt) Show pHMM detection rules used

histidine2glutamate_hutHGIU_operon: (minimum(3, [Amidohydro_1, Amidohydro_3, Arginase, FGase, Urocanase]) and Lyase_aromatic and Urocanase_C)

Legend:

core biosynthetic genes

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transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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c00096_JAIFZJ0.. - Region 1 - fatty_acids-unassigned

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Location: 1 - 53,656 nt. (total: 53,656 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

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c00102_JAIFZJ0.. - Region 1 - hydroxybenzoate2phenol

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Location: 66,497 - 88,499 nt. (total: 22,003 nt) Show pHMM detection rules used

hydroxybenzoate2phenol: (Flavoprotein and Phea_decarb and not ubi_syn)

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core biosynthetic genes

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c00113_JAIFZJ0.. - Region 1 - Putrescine2spermidine

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Location: 133,417 - 145,310 nt. (total: 11,894 nt) Show pHMM detection rules used

Region on contig edge.

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

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core biosynthetic genes

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resistance genes

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electron transport genes

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c00115_JAIFZJ0.. - Region 1 - fatty_acids-unassigned

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Location: 1 - 16,776 nt. (total: 16,776 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

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c00126_JAIFZJ0.. - Region 1 - fatty_acids-unassigned

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Location: 1 - 23,214 nt. (total: 23,214 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

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No matches found.

c00139_JAIFZJ0.. - Region 1 - Nitrate_reductase

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Location: 1 - 17,037 nt. (total: 17,037 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

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c00146_JAIFZJ0.. - Region 1 - fatty_acids-unassigned

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Location: 6,932 - 30,148 nt. (total: 23,217 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

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c00168_JAIFZJ0.. - Region 1 - TPP_AA_metabolism

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Location: 86,828 - 100,647 nt. (total: 13,820 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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core biosynthetic genes

additional biosynthetic genes

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