GCA_020026475.1 - 1 region(s) - gutSMASH results

Identified primary metabolite regions

JAINRL010000015 (original name was: JAINRL010000015.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 15.1	TPP_AA_metabolism	Putative	1	27,155

No primary metabolite regions were found in these records:: JAINRL010000001 (original name was: JAINRL010000001.1); JAINRL010000002 (original name was: JAINRL010000002.1); JAINRL010000003 (original name was: JAINRL010000003.1); JAINRL010000004 (original name was: JAINRL010000004.1); JAINRL010000005 (original name was: JAINRL010000005.1); JAINRL010000006 (original name was: JAINRL010000006.1); JAINRL010000007 (original name was: JAINRL010000007.1); JAINRL010000008 (original name was: JAINRL010000008.1); JAINRL010000009 (original name was: JAINRL010000009.1); JAINRL010000010 (original name was: JAINRL010000010.1); JAINRL010000011 (original name was: JAINRL010000011.1); JAINRL010000012 (original name was: JAINRL010000012.1); JAINRL010000013 (original name was: JAINRL010000013.1); JAINRL010000014 (original name was: JAINRL010000014.1); JAINRL010000016 (original name was: JAINRL010000016.1); JAINRL010000017 (original name was: JAINRL010000017.1); JAINRL010000018 (original name was: JAINRL010000018.1); JAINRL010000019 (original name was: JAINRL010000019.1); JAINRL010000020 (original name was: JAINRL010000020.1); JAINRL010000021 (original name was: JAINRL010000021.1); JAINRL010000022 (original name was: JAINRL010000022.1); JAINRL010000023 (original name was: JAINRL010000023.1); JAINRL010000024 (original name was: JAINRL010000024.1); JAINRL010000025 (original name was: JAINRL010000025.1); JAINRL010000026 (original name was: JAINRL010000026.1); JAINRL010000027 (original name was: JAINRL010000027.1); JAINRL010000028 (original name was: JAINRL010000028.1); JAINRL010000029 (original name was: JAINRL010000029.1); JAINRL010000030 (original name was: JAINRL010000030.1); JAINRL010000031 (original name was: JAINRL010000031.1); JAINRL010000032 (original name was: JAINRL010000032.1); JAINRL010000033 (original name was: JAINRL010000033.1); JAINRL010000034 (original name was: JAINRL010000034.1); JAINRL010000035 (original name was: JAINRL010000035.1); JAINRL010000036 (original name was: JAINRL010000036.1); JAINRL010000037 (original name was: JAINRL010000037.1); JAINRL010000038 (original name was: JAINRL010000038.1); JAINRL010000039 (original name was: JAINRL010000039.1); JAINRL010000040 (original name was: JAINRL010000040.1); JAINRL010000041 (original name was: JAINRL010000041.1); JAINRL010000042 (original name was: JAINRL010000042.1); JAINRL010000043 (original name was: JAINRL010000043.1); JAINRL010000044 (original name was: JAINRL010000044.1); JAINRL010000045 (original name was: JAINRL010000045.1); JAINRL010000046 (original name was: JAINRL010000046.1); JAINRL010000047 (original name was: JAINRL010000047.1); JAINRL010000048 (original name was: JAINRL010000048.1); JAINRL010000049 (original name was: JAINRL010000049.1); JAINRL010000050 (original name was: JAINRL010000050.1); JAINRL010000051 (original name was: JAINRL010000051.1); JAINRL010000052 (original name was: JAINRL010000052.1); JAINRL010000053 (original name was: JAINRL010000053.1); JAINRL010000054 (original name was: JAINRL010000054.1); JAINRL010000055 (original name was: JAINRL010000055.1); JAINRL010000056 (original name was: JAINRL010000056.1); JAINRL010000057 (original name was: JAINRL010000057.1)

Compact view

c00015_JAINRL0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 1 - 27,155 nt. (total: 27,155 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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