GCA_020075875.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQWE010000012 (original name was: JAIQWE010000012.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	lanthipeptide-class-i	14,193	38,140

JAIQWE010000016 (original name was: JAIQWE010000016.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RiPP-like	1	12,932	gassericin T	RiPP	22%

JAIQWE010000002 (original name was: JAIQWE010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RaS-RiPP,lanthipeptide-class-iv	176,183	193,730

JAIQWE010000003 (original name was: JAIQWE010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	RRE-containing	28,799	50,046

JAIQWE010000007 (original name was: JAIQWE010000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	RiPP-like	86,442	99,732

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	lanthipeptide-class-i	14,193	38,140
Region 7.1	RiPP-like	1	12,932	gassericin T	RiPP	22%
Region 20.1	RaS-RiPP,lanthipeptide-class-iv	176,183	193,730
Region 24.1	RRE-containing	28,799	50,046
Region 28.1	RiPP-like	86,442	99,732

No secondary metabolite regions were found in these records:: JAIQWE010000010 (original name was: JAIQWE010000010.1); JAIQWE010000011 (original name was: JAIQWE010000011.1); JAIQWE010000013 (original name was: JAIQWE010000013.1); JAIQWE010000014 (original name was: JAIQWE010000014.1); JAIQWE010000015 (original name was: JAIQWE010000015.1); JAIQWE010000017 (original name was: JAIQWE010000017.1); JAIQWE010000018 (original name was: JAIQWE010000018.1); JAIQWE010000001 (original name was: JAIQWE010000001.1); JAIQWE010000019 (original name was: JAIQWE010000019.1); JAIQWE010000020 (original name was: JAIQWE010000020.1); JAIQWE010000021 (original name was: JAIQWE010000021.1); JAIQWE010000022 (original name was: JAIQWE010000022.1); JAIQWE010000023 (original name was: JAIQWE010000023.1); JAIQWE010000024 (original name was: JAIQWE010000024.1); JAIQWE010000025 (original name was: JAIQWE010000025.1); JAIQWE010000026 (original name was: JAIQWE010000026.1); JAIQWE010000027 (original name was: JAIQWE010000027.1); JAIQWE010000028 (original name was: JAIQWE010000028.1); JAIQWE010000029 (original name was: JAIQWE010000029.1); JAIQWE010000030 (original name was: JAIQWE010000030.1); JAIQWE010000004 (original name was: JAIQWE010000004.1); JAIQWE010000005 (original name was: JAIQWE010000005.1); JAIQWE010000006 (original name was: JAIQWE010000006.1); JAIQWE010000008 (original name was: JAIQWE010000008.1); JAIQWE010000009 (original name was: JAIQWE010000009.1)

Compact view

c00003_JAIQWE0.. - Region 1 - lanthipeptide-class-i

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Location: 14,193 - 38,140 nt. (total: 23,948 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00007_JAIQWE0.. - Region 1 - RiPP-like

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Location: 1 - 12,932 nt. (total: 12,932 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00020_JAIQWE0.. - Region 1 - RaS-RiPP,lanthipeptide-class-iv

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Location: 176,183 - 193,730 nt. (total: 17,548 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)
lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00024_JAIQWE0.. - Region 1 - RRE-containing

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Location: 28,799 - 50,046 nt. (total: 21,248 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00028_JAIQWE0.. - Region 1 - RiPP-like

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Location: 86,442 - 99,732 nt. (total: 13,291 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.