GCA_020075875.1 - 1 region(s) - gutSMASH results

Identified primary metabolite regions

JAIQWE010000010 (original name was: JAIQWE010000010.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	TPP_AA_metabolism	Putative	349	30,613

No primary metabolite regions were found in these records:: JAIQWE010000011 (original name was: JAIQWE010000011.1); JAIQWE010000012 (original name was: JAIQWE010000012.1); JAIQWE010000013 (original name was: JAIQWE010000013.1); JAIQWE010000014 (original name was: JAIQWE010000014.1); JAIQWE010000015 (original name was: JAIQWE010000015.1); JAIQWE010000016 (original name was: JAIQWE010000016.1); JAIQWE010000017 (original name was: JAIQWE010000017.1); JAIQWE010000018 (original name was: JAIQWE010000018.1); JAIQWE010000001 (original name was: JAIQWE010000001.1); JAIQWE010000019 (original name was: JAIQWE010000019.1); JAIQWE010000020 (original name was: JAIQWE010000020.1); JAIQWE010000021 (original name was: JAIQWE010000021.1); JAIQWE010000022 (original name was: JAIQWE010000022.1); JAIQWE010000023 (original name was: JAIQWE010000023.1); JAIQWE010000024 (original name was: JAIQWE010000024.1); JAIQWE010000025 (original name was: JAIQWE010000025.1); JAIQWE010000026 (original name was: JAIQWE010000026.1); JAIQWE010000027 (original name was: JAIQWE010000027.1); JAIQWE010000002 (original name was: JAIQWE010000002.1); JAIQWE010000028 (original name was: JAIQWE010000028.1); JAIQWE010000029 (original name was: JAIQWE010000029.1); JAIQWE010000030 (original name was: JAIQWE010000030.1); JAIQWE010000003 (original name was: JAIQWE010000003.1); JAIQWE010000004 (original name was: JAIQWE010000004.1); JAIQWE010000005 (original name was: JAIQWE010000005.1); JAIQWE010000006 (original name was: JAIQWE010000006.1); JAIQWE010000007 (original name was: JAIQWE010000007.1); JAIQWE010000008 (original name was: JAIQWE010000008.1); JAIQWE010000009 (original name was: JAIQWE010000009.1)

Compact view

c00001_JAIQWE0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 349 - 30,613 nt. (total: 30,265 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.