GCA_020075925.1 - 7 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQWG010000010 (original name was: JAIQWG010000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RaS-RiPP	1	16,744	streptide	RiPP	100%

JAIQWG010000018 (original name was: JAIQWG010000018.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	lanthipeptide-class-iv	22,880	36,385

JAIQWG010000021 (original name was: JAIQWG010000021.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	lanthipeptide-class-i	1	15,323	lactocin S	RiPP:Lanthipeptide	10%

JAIQWG010000002 (original name was: JAIQWG010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	NRPS-like	8,084	50,975	asukamycin	Polyketide:Type II	4%

JAIQWG010000035 (original name was: JAIQWG010000035.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	ranthipeptide	1	6,357

JAIQWG010000004 (original name was: JAIQWG010000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	RRE-containing	98,870	120,003

JAIQWG010000006 (original name was: JAIQWG010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	RiPP-like	86,906	100,414

No secondary metabolite regions were found in these records:: JAIQWG010000011 (original name was: JAIQWG010000011.1); JAIQWG010000012 (original name was: JAIQWG010000012.1); JAIQWG010000013 (original name was: JAIQWG010000013.1); JAIQWG010000014 (original name was: JAIQWG010000014.1); JAIQWG010000015 (original name was: JAIQWG010000015.1); JAIQWG010000016 (original name was: JAIQWG010000016.1); JAIQWG010000017 (original name was: JAIQWG010000017.1); JAIQWG010000019 (original name was: JAIQWG010000019.1); JAIQWG010000001 (original name was: JAIQWG010000001.1); JAIQWG010000020 (original name was: JAIQWG010000020.1); JAIQWG010000022 (original name was: JAIQWG010000022.1); JAIQWG010000023 (original name was: JAIQWG010000023.1); JAIQWG010000024 (original name was: JAIQWG010000024.1); JAIQWG010000025 (original name was: JAIQWG010000025.1); JAIQWG010000026 (original name was: JAIQWG010000026.1); JAIQWG010000027 (original name was: JAIQWG010000027.1); JAIQWG010000028 (original name was: JAIQWG010000028.1); JAIQWG010000029 (original name was: JAIQWG010000029.1); JAIQWG010000030 (original name was: JAIQWG010000030.1); JAIQWG010000031 (original name was: JAIQWG010000031.1); JAIQWG010000032 (original name was: JAIQWG010000032.1); JAIQWG010000033 (original name was: JAIQWG010000033.1); JAIQWG010000034 (original name was: JAIQWG010000034.1); JAIQWG010000036 (original name was: JAIQWG010000036.1); JAIQWG010000037 (original name was: JAIQWG010000037.1); JAIQWG010000038 (original name was: JAIQWG010000038.1); JAIQWG010000003 (original name was: JAIQWG010000003.1); JAIQWG010000039 (original name was: JAIQWG010000039.1); JAIQWG010000040 (original name was: JAIQWG010000040.1); JAIQWG010000041 (original name was: JAIQWG010000041.1); JAIQWG010000042 (original name was: JAIQWG010000042.1); JAIQWG010000043 (original name was: JAIQWG010000043.1); JAIQWG010000044 (original name was: JAIQWG010000044.1); JAIQWG010000045 (original name was: JAIQWG010000045.1); JAIQWG010000046 (original name was: JAIQWG010000046.1); JAIQWG010000005 (original name was: JAIQWG010000005.1); JAIQWG010000007 (original name was: JAIQWG010000007.1); JAIQWG010000008 (original name was: JAIQWG010000008.1); JAIQWG010000009 (original name was: JAIQWG010000009.1)

Compact view

c00001_JAIQWG0.. - Region 1 - RaS-RiPP

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Location: 1 - 16,744 nt. (total: 16,744 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00009_JAIQWG0.. - Region 1 - lanthipeptide-class-iv

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Location: 22,880 - 36,385 nt. (total: 13,506 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00013_JAIQWG0.. - Region 1 - lanthipeptide-class-i

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Location: 1 - 15,323 nt. (total: 15,323 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

Lanthipeptides

Core peptide predictions

No core peptides found.

c00022_JAIQWG0.. - Region 1 - NRPS-like

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Location: 8,084 - 50,975 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

c00028_JAIQWG0.. - Region 1 - ranthipeptide

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Location: 1 - 6,357 nt. (total: 6,357 nt) Show pHMM detection rules used

Region on contig edge.

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or YcaO or TIGR03882)))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00041_JAIQWG0.. - Region 1 - RRE-containing

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Location: 98,870 - 120,003 nt. (total: 21,134 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00043_JAIQWG0.. - Region 1 - RiPP-like

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Location: 86,906 - 100,414 nt. (total: 13,509 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.