GCA_020075925.1 - 1 region(s) - gutSMASH results

Identified primary metabolite regions

JAIQWG010000008 (original name was: JAIQWG010000008.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 45.1	TPP_AA_metabolism	Putative	1	29,935

No primary metabolite regions were found in these records:: JAIQWG010000010 (original name was: JAIQWG010000010.1); JAIQWG010000011 (original name was: JAIQWG010000011.1); JAIQWG010000012 (original name was: JAIQWG010000012.1); JAIQWG010000013 (original name was: JAIQWG010000013.1); JAIQWG010000014 (original name was: JAIQWG010000014.1); JAIQWG010000015 (original name was: JAIQWG010000015.1); JAIQWG010000016 (original name was: JAIQWG010000016.1); JAIQWG010000017 (original name was: JAIQWG010000017.1); JAIQWG010000018 (original name was: JAIQWG010000018.1); JAIQWG010000019 (original name was: JAIQWG010000019.1); JAIQWG010000001 (original name was: JAIQWG010000001.1); JAIQWG010000020 (original name was: JAIQWG010000020.1); JAIQWG010000021 (original name was: JAIQWG010000021.1); JAIQWG010000022 (original name was: JAIQWG010000022.1); JAIQWG010000023 (original name was: JAIQWG010000023.1); JAIQWG010000024 (original name was: JAIQWG010000024.1); JAIQWG010000025 (original name was: JAIQWG010000025.1); JAIQWG010000026 (original name was: JAIQWG010000026.1); JAIQWG010000027 (original name was: JAIQWG010000027.1); JAIQWG010000028 (original name was: JAIQWG010000028.1); JAIQWG010000029 (original name was: JAIQWG010000029.1); JAIQWG010000002 (original name was: JAIQWG010000002.1); JAIQWG010000030 (original name was: JAIQWG010000030.1); JAIQWG010000031 (original name was: JAIQWG010000031.1); JAIQWG010000032 (original name was: JAIQWG010000032.1); JAIQWG010000033 (original name was: JAIQWG010000033.1); JAIQWG010000034 (original name was: JAIQWG010000034.1); JAIQWG010000035 (original name was: JAIQWG010000035.1); JAIQWG010000036 (original name was: JAIQWG010000036.1); JAIQWG010000037 (original name was: JAIQWG010000037.1); JAIQWG010000038 (original name was: JAIQWG010000038.1); JAIQWG010000003 (original name was: JAIQWG010000003.1); JAIQWG010000039 (original name was: JAIQWG010000039.1); JAIQWG010000040 (original name was: JAIQWG010000040.1); JAIQWG010000041 (original name was: JAIQWG010000041.1); JAIQWG010000042 (original name was: JAIQWG010000042.1); JAIQWG010000043 (original name was: JAIQWG010000043.1); JAIQWG010000044 (original name was: JAIQWG010000044.1); JAIQWG010000045 (original name was: JAIQWG010000045.1); JAIQWG010000046 (original name was: JAIQWG010000046.1); JAIQWG010000004 (original name was: JAIQWG010000004.1); JAIQWG010000005 (original name was: JAIQWG010000005.1); JAIQWG010000006 (original name was: JAIQWG010000006.1); JAIQWG010000007 (original name was: JAIQWG010000007.1); JAIQWG010000009 (original name was: JAIQWG010000009.1)

Compact view

c00045_JAIQWG0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 1 - 29,935 nt. (total: 29,935 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.