GCA_020075945.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQWH010000012 (original name was: JAIQWH010000012.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RRE-containing	2,220	23,344

JAIQWH010000016 (original name was: JAIQWH010000016.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RaS-RiPP	25,282	43,260

JAIQWH010000021 (original name was: JAIQWH010000021.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	NRPS-like	1	23,617

JAIQWH010000005 (original name was: JAIQWH010000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 52.1	RiPP-like	33,339	52,286

JAIQWH010000008 (original name was: JAIQWH010000008.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	RaS-RiPP	1	18,099	streptide	RiPP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	RRE-containing	2,220	23,344
Region 7.1	RaS-RiPP	25,282	43,260
Region 13.1	NRPS-like	1	23,617
Region 52.1	RiPP-like	33,339	52,286
Region 62.1	RaS-RiPP	1	18,099	streptide	RiPP	100%

No secondary metabolite regions were found in these records:: JAIQWH010000010 (original name was: JAIQWH010000010.1); JAIQWH010000011 (original name was: JAIQWH010000011.1); JAIQWH010000013 (original name was: JAIQWH010000013.1); JAIQWH010000014 (original name was: JAIQWH010000014.1); JAIQWH010000015 (original name was: JAIQWH010000015.1); JAIQWH010000017 (original name was: JAIQWH010000017.1); JAIQWH010000018 (original name was: JAIQWH010000018.1); JAIQWH010000019 (original name was: JAIQWH010000019.1); JAIQWH010000001 (original name was: JAIQWH010000001.1); JAIQWH010000020 (original name was: JAIQWH010000020.1); JAIQWH010000022 (original name was: JAIQWH010000022.1); JAIQWH010000023 (original name was: JAIQWH010000023.1); JAIQWH010000024 (original name was: JAIQWH010000024.1); JAIQWH010000025 (original name was: JAIQWH010000025.1); JAIQWH010000026 (original name was: JAIQWH010000026.1); JAIQWH010000027 (original name was: JAIQWH010000027.1); JAIQWH010000028 (original name was: JAIQWH010000028.1); JAIQWH010000029 (original name was: JAIQWH010000029.1); JAIQWH010000002 (original name was: JAIQWH010000002.1); JAIQWH010000030 (original name was: JAIQWH010000030.1); JAIQWH010000031 (original name was: JAIQWH010000031.1); JAIQWH010000032 (original name was: JAIQWH010000032.1); JAIQWH010000033 (original name was: JAIQWH010000033.1); JAIQWH010000034 (original name was: JAIQWH010000034.1); JAIQWH010000035 (original name was: JAIQWH010000035.1); JAIQWH010000036 (original name was: JAIQWH010000036.1); JAIQWH010000037 (original name was: JAIQWH010000037.1); JAIQWH010000038 (original name was: JAIQWH010000038.1); JAIQWH010000039 (original name was: JAIQWH010000039.1); JAIQWH010000003 (original name was: JAIQWH010000003.1); JAIQWH010000040 (original name was: JAIQWH010000040.1); JAIQWH010000041 (original name was: JAIQWH010000041.1); JAIQWH010000042 (original name was: JAIQWH010000042.1); JAIQWH010000043 (original name was: JAIQWH010000043.1); JAIQWH010000044 (original name was: JAIQWH010000044.1); JAIQWH010000045 (original name was: JAIQWH010000045.1); JAIQWH010000046 (original name was: JAIQWH010000046.1); JAIQWH010000047 (original name was: JAIQWH010000047.1); JAIQWH010000048 (original name was: JAIQWH010000048.1); JAIQWH010000049 (original name was: JAIQWH010000049.1); JAIQWH010000004 (original name was: JAIQWH010000004.1); JAIQWH010000050 (original name was: JAIQWH010000050.1); JAIQWH010000051 (original name was: JAIQWH010000051.1); JAIQWH010000052 (original name was: JAIQWH010000052.1); JAIQWH010000053 (original name was: JAIQWH010000053.1); JAIQWH010000054 (original name was: JAIQWH010000054.1); JAIQWH010000055 (original name was: JAIQWH010000055.1); JAIQWH010000056 (original name was: JAIQWH010000056.1); JAIQWH010000057 (original name was: JAIQWH010000057.1); JAIQWH010000058 (original name was: JAIQWH010000058.1); JAIQWH010000059 (original name was: JAIQWH010000059.1); JAIQWH010000060 (original name was: JAIQWH010000060.1); JAIQWH010000061 (original name was: JAIQWH010000061.1); JAIQWH010000062 (original name was: JAIQWH010000062.1); JAIQWH010000063 (original name was: JAIQWH010000063.1); JAIQWH010000006 (original name was: JAIQWH010000006.1); JAIQWH010000007 (original name was: JAIQWH010000007.1); JAIQWH010000009 (original name was: JAIQWH010000009.1)

Compact view

c00003_JAIQWH0.. - Region 1 - RRE-containing

Download region GenBank file

Download region SVG

Location: 2,220 - 23,344 nt. (total: 21,125 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00007_JAIQWH0.. - Region 1 - RaS-RiPP

Download region GenBank file

Download region SVG

Location: 25,282 - 43,260 nt. (total: 17,979 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00013_JAIQWH0.. - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 1 - 23,617 nt. (total: 23,617 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

c00052_JAIQWH0.. - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 33,339 - 52,286 nt. (total: 18,948 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00062_JAIQWH0.. - Region 1 - RaS-RiPP

Download region GenBank file

Download region SVG

Location: 1 - 18,099 nt. (total: 18,099 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters