GCA_020076015.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQWJ010000013 (original name was: JAIQWJ010000013.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RaS-RiPP	1	17,958

JAIQWJ010000014 (original name was: JAIQWJ010000014.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	lanthipeptide-class-i	23,070	47,017

JAIQWJ010000019 (original name was: JAIQWJ010000019.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	RiPP-like	13,643	26,574	gassericin T	RiPP	22%

JAIQWJ010000001 (original name was: JAIQWJ010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	124,877	146,124

JAIQWJ010000006 (original name was: JAIQWJ010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	RiPP-like	1	13,291

JAIQWJ010000008 (original name was: JAIQWJ010000008.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RaS-RiPP,lanthipeptide-class-iv	1	16,844

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	RaS-RiPP	1	17,958
Region 5.1	lanthipeptide-class-i	23,070	47,017
Region 10.1	RiPP-like	13,643	26,574	gassericin T	RiPP	22%
Region 11.1	RRE-containing	124,877	146,124
Region 30.1	RiPP-like	1	13,291
Region 32.1	RaS-RiPP,lanthipeptide-class-iv	1	16,844

No secondary metabolite regions were found in these records:: JAIQWJ010000010 (original name was: JAIQWJ010000010.1); JAIQWJ010000011 (original name was: JAIQWJ010000011.1); JAIQWJ010000012 (original name was: JAIQWJ010000012.1); JAIQWJ010000015 (original name was: JAIQWJ010000015.1); JAIQWJ010000016 (original name was: JAIQWJ010000016.1); JAIQWJ010000017 (original name was: JAIQWJ010000017.1); JAIQWJ010000018 (original name was: JAIQWJ010000018.1); JAIQWJ010000020 (original name was: JAIQWJ010000020.1); JAIQWJ010000021 (original name was: JAIQWJ010000021.1); JAIQWJ010000022 (original name was: JAIQWJ010000022.1); JAIQWJ010000023 (original name was: JAIQWJ010000023.1); JAIQWJ010000024 (original name was: JAIQWJ010000024.1); JAIQWJ010000025 (original name was: JAIQWJ010000025.1); JAIQWJ010000026 (original name was: JAIQWJ010000026.1); JAIQWJ010000027 (original name was: JAIQWJ010000027.1); JAIQWJ010000028 (original name was: JAIQWJ010000028.1); JAIQWJ010000002 (original name was: JAIQWJ010000002.1); JAIQWJ010000029 (original name was: JAIQWJ010000029.1); JAIQWJ010000030 (original name was: JAIQWJ010000030.1); JAIQWJ010000031 (original name was: JAIQWJ010000031.1); JAIQWJ010000032 (original name was: JAIQWJ010000032.1); JAIQWJ010000033 (original name was: JAIQWJ010000033.1); JAIQWJ010000003 (original name was: JAIQWJ010000003.1); JAIQWJ010000004 (original name was: JAIQWJ010000004.1); JAIQWJ010000005 (original name was: JAIQWJ010000005.1); JAIQWJ010000007 (original name was: JAIQWJ010000007.1); JAIQWJ010000009 (original name was: JAIQWJ010000009.1)

Compact view

c00004_JAIQWJ0.. - Region 1 - RaS-RiPP

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Location: 1 - 17,958 nt. (total: 17,958 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00005_JAIQWJ0.. - Region 1 - lanthipeptide-class-i

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Location: 23,070 - 47,017 nt. (total: 23,948 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00010_JAIQWJ0.. - Region 1 - RiPP-like

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Location: 13,643 - 26,574 nt. (total: 12,932 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00011_JAIQWJ0.. - Region 1 - RRE-containing

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Location: 124,877 - 146,124 nt. (total: 21,248 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00030_JAIQWJ0.. - Region 1 - RiPP-like

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Location: 1 - 13,291 nt. (total: 13,291 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00032_JAIQWJ0.. - Region 1 - RaS-RiPP,lanthipeptide-class-iv

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Location: 1 - 16,844 nt. (total: 16,844 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)
lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.