GCA_020076045.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQWM010000013 (original name was: JAIQWM010000013.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RRE-containing	4,674	25,798

JAIQWM010000014 (original name was: JAIQWM010000014.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RaS-RiPP	33,018	50,902

JAIQWM010000021 (original name was: JAIQWM010000021.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	RaS-RiPP	1	16,743	streptide	RiPP	100%

JAIQWM010000026 (original name was: JAIQWM010000026.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	lanthipeptide-class-iv	3,214	16,720

JAIQWM010000003 (original name was: JAIQWM010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RiPP-like	33,345	52,292

JAIQWM010000006 (original name was: JAIQWM010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	NRPS-like	47,900	90,791	asukamycin	Polyketide:Type II	4%

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	RRE-containing	4,674	25,798
Region 5.1	RaS-RiPP	33,018	50,902
Region 13.1	RaS-RiPP	1	16,743	streptide	RiPP	100%
Region 18.1	lanthipeptide-class-iv	3,214	16,720
Region 32.1	RiPP-like	33,345	52,292
Region 38.1	NRPS-like	47,900	90,791	asukamycin	Polyketide:Type II	4%

No secondary metabolite regions were found in these records:: JAIQWM010000010 (original name was: JAIQWM010000010.1); JAIQWM010000011 (original name was: JAIQWM010000011.1); JAIQWM010000012 (original name was: JAIQWM010000012.1); JAIQWM010000015 (original name was: JAIQWM010000015.1); JAIQWM010000016 (original name was: JAIQWM010000016.1); JAIQWM010000017 (original name was: JAIQWM010000017.1); JAIQWM010000018 (original name was: JAIQWM010000018.1); JAIQWM010000019 (original name was: JAIQWM010000019.1); JAIQWM010000001 (original name was: JAIQWM010000001.1); JAIQWM010000020 (original name was: JAIQWM010000020.1); JAIQWM010000022 (original name was: JAIQWM010000022.1); JAIQWM010000023 (original name was: JAIQWM010000023.1); JAIQWM010000024 (original name was: JAIQWM010000024.1); JAIQWM010000025 (original name was: JAIQWM010000025.1); JAIQWM010000027 (original name was: JAIQWM010000027.1); JAIQWM010000028 (original name was: JAIQWM010000028.1); JAIQWM010000029 (original name was: JAIQWM010000029.1); JAIQWM010000002 (original name was: JAIQWM010000002.1); JAIQWM010000030 (original name was: JAIQWM010000030.1); JAIQWM010000031 (original name was: JAIQWM010000031.1); JAIQWM010000032 (original name was: JAIQWM010000032.1); JAIQWM010000033 (original name was: JAIQWM010000033.1); JAIQWM010000034 (original name was: JAIQWM010000034.1); JAIQWM010000035 (original name was: JAIQWM010000035.1); JAIQWM010000036 (original name was: JAIQWM010000036.1); JAIQWM010000037 (original name was: JAIQWM010000037.1); JAIQWM010000038 (original name was: JAIQWM010000038.1); JAIQWM010000039 (original name was: JAIQWM010000039.1); JAIQWM010000040 (original name was: JAIQWM010000040.1); JAIQWM010000041 (original name was: JAIQWM010000041.1); JAIQWM010000004 (original name was: JAIQWM010000004.1); JAIQWM010000005 (original name was: JAIQWM010000005.1); JAIQWM010000007 (original name was: JAIQWM010000007.1); JAIQWM010000008 (original name was: JAIQWM010000008.1); JAIQWM010000009 (original name was: JAIQWM010000009.1)

Compact view

c00004_JAIQWM0.. - Region 1 - RRE-containing

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Location: 4,674 - 25,798 nt. (total: 21,125 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00005_JAIQWM0.. - Region 1 - RaS-RiPP

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Location: 33,018 - 50,902 nt. (total: 17,885 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00013_JAIQWM0.. - Region 1 - RaS-RiPP

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Location: 1 - 16,743 nt. (total: 16,743 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00018_JAIQWM0.. - Region 1 - lanthipeptide-class-iv

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Location: 3,214 - 16,720 nt. (total: 13,507 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00032_JAIQWM0.. - Region 1 - RiPP-like

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Location: 33,345 - 52,292 nt. (total: 18,948 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00038_JAIQWM0.. - Region 1 - NRPS-like

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Location: 47,900 - 90,791 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters