GCA_020076065.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQWO010000012 (original name was: JAIQWO010000012.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RRE-containing	29,123	50,247

JAIQWO010000014 (original name was: JAIQWO010000014.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RaS-RiPP	28,724	46,816

JAIQWO010000022 (original name was: JAIQWO010000022.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RaS-RiPP	1	17,346	streptide	RiPP	100%

JAIQWO010000029 (original name was: JAIQWO010000029.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	lanthipeptide-class-iv	3,214	16,720

JAIQWO010000003 (original name was: JAIQWO010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RiPP-like	33,339	52,286

JAIQWO010000042 (original name was: JAIQWO010000042.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	NRPS-like	1	6,708

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	RRE-containing	29,123	50,247
Region 5.1	RaS-RiPP	28,724	46,816
Region 14.1	RaS-RiPP	1	17,346	streptide	RiPP	100%
Region 21.1	lanthipeptide-class-iv	3,214	16,720
Region 33.1	RiPP-like	33,339	52,286
Region 36.1	NRPS-like	1	6,708

No secondary metabolite regions were found in these records:: JAIQWO010000010 (original name was: JAIQWO010000010.1); JAIQWO010000011 (original name was: JAIQWO010000011.1); JAIQWO010000013 (original name was: JAIQWO010000013.1); JAIQWO010000015 (original name was: JAIQWO010000015.1); JAIQWO010000016 (original name was: JAIQWO010000016.1); JAIQWO010000017 (original name was: JAIQWO010000017.1); JAIQWO010000018 (original name was: JAIQWO010000018.1); JAIQWO010000019 (original name was: JAIQWO010000019.1); JAIQWO010000001 (original name was: JAIQWO010000001.1); JAIQWO010000020 (original name was: JAIQWO010000020.1); JAIQWO010000021 (original name was: JAIQWO010000021.1); JAIQWO010000023 (original name was: JAIQWO010000023.1); JAIQWO010000024 (original name was: JAIQWO010000024.1); JAIQWO010000025 (original name was: JAIQWO010000025.1); JAIQWO010000026 (original name was: JAIQWO010000026.1); JAIQWO010000027 (original name was: JAIQWO010000027.1); JAIQWO010000028 (original name was: JAIQWO010000028.1); JAIQWO010000002 (original name was: JAIQWO010000002.1); JAIQWO010000030 (original name was: JAIQWO010000030.1); JAIQWO010000031 (original name was: JAIQWO010000031.1); JAIQWO010000032 (original name was: JAIQWO010000032.1); JAIQWO010000033 (original name was: JAIQWO010000033.1); JAIQWO010000034 (original name was: JAIQWO010000034.1); JAIQWO010000035 (original name was: JAIQWO010000035.1); JAIQWO010000036 (original name was: JAIQWO010000036.1); JAIQWO010000037 (original name was: JAIQWO010000037.1); JAIQWO010000038 (original name was: JAIQWO010000038.1); JAIQWO010000039 (original name was: JAIQWO010000039.1); JAIQWO010000040 (original name was: JAIQWO010000040.1); JAIQWO010000041 (original name was: JAIQWO010000041.1); JAIQWO010000043 (original name was: JAIQWO010000043.1); JAIQWO010000044 (original name was: JAIQWO010000044.1); JAIQWO010000045 (original name was: JAIQWO010000045.1); JAIQWO010000046 (original name was: JAIQWO010000046.1); JAIQWO010000004 (original name was: JAIQWO010000004.1); JAIQWO010000047 (original name was: JAIQWO010000047.1); JAIQWO010000048 (original name was: JAIQWO010000048.1); JAIQWO010000049 (original name was: JAIQWO010000049.1); JAIQWO010000050 (original name was: JAIQWO010000050.1); JAIQWO010000051 (original name was: JAIQWO010000051.1); JAIQWO010000052 (original name was: JAIQWO010000052.1); JAIQWO010000005 (original name was: JAIQWO010000005.1); JAIQWO010000006 (original name was: JAIQWO010000006.1); JAIQWO010000007 (original name was: JAIQWO010000007.1); JAIQWO010000008 (original name was: JAIQWO010000008.1); JAIQWO010000009 (original name was: JAIQWO010000009.1)

Compact view

c00003_JAIQWO0.. - Region 1 - RRE-containing

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Location: 29,123 - 50,247 nt. (total: 21,125 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00005_JAIQWO0.. - Region 1 - RaS-RiPP

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Location: 28,724 - 46,816 nt. (total: 18,093 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00014_JAIQWO0.. - Region 1 - RaS-RiPP

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Location: 1 - 17,346 nt. (total: 17,346 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00021_JAIQWO0.. - Region 1 - lanthipeptide-class-iv

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Location: 3,214 - 16,720 nt. (total: 13,507 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00033_JAIQWO0.. - Region 1 - RiPP-like

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Location: 33,339 - 52,286 nt. (total: 18,948 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00036_JAIQWO0.. - Region 1 - NRPS-like

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Location: 1 - 6,708 nt. (total: 6,708 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.