GCA_020076085.1 - 7 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQWN010000012 (original name was: JAIQWN010000012.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RaS-RiPP	33,277	51,222

JAIQWN010000020 (original name was: JAIQWN010000020.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	lanthipeptide-class-i	1	15,267	lactocin S	RiPP:Lanthipeptide	10%

JAIQWN010000002 (original name was: JAIQWN010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RRE-containing	154,496	174,651

JAIQWN010000003 (original name was: JAIQWN010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	RaS-RiPP	61,377	83,801	streptide	RiPP	100%

JAIQWN010000006 (original name was: JAIQWN010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	RiPP-like	1	14,104

JAIQWN010000008 (original name was: JAIQWN010000008.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	lanthipeptide-class-iv	1	14,135

JAIQWN010000009 (original name was: JAIQWN010000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	NRPS-like	30,309	73,200	asukamycin	Polyketide:Type II	4%

Region	Type	From	To	Most similar known cluster	Similarity
Region 3.1	RaS-RiPP	33,277	51,222
Region 12.1	lanthipeptide-class-i	1	15,267	lactocin S	RiPP:Lanthipeptide	10%
Region 20.1	RRE-containing	154,496	174,651
Region 29.1	RaS-RiPP	61,377	83,801	streptide	RiPP	100%
Region 35.1	RiPP-like	1	14,104
Region 37.1	lanthipeptide-class-iv	1	14,135
Region 38.1	NRPS-like	30,309	73,200	asukamycin	Polyketide:Type II	4%

No secondary metabolite regions were found in these records:: JAIQWN010000010 (original name was: JAIQWN010000010.1); JAIQWN010000011 (original name was: JAIQWN010000011.1); JAIQWN010000013 (original name was: JAIQWN010000013.1); JAIQWN010000014 (original name was: JAIQWN010000014.1); JAIQWN010000015 (original name was: JAIQWN010000015.1); JAIQWN010000016 (original name was: JAIQWN010000016.1); JAIQWN010000017 (original name was: JAIQWN010000017.1); JAIQWN010000018 (original name was: JAIQWN010000018.1); JAIQWN010000001 (original name was: JAIQWN010000001.1); JAIQWN010000019 (original name was: JAIQWN010000019.1); JAIQWN010000021 (original name was: JAIQWN010000021.1); JAIQWN010000022 (original name was: JAIQWN010000022.1); JAIQWN010000023 (original name was: JAIQWN010000023.1); JAIQWN010000024 (original name was: JAIQWN010000024.1); JAIQWN010000025 (original name was: JAIQWN010000025.1); JAIQWN010000026 (original name was: JAIQWN010000026.1); JAIQWN010000027 (original name was: JAIQWN010000027.1); JAIQWN010000028 (original name was: JAIQWN010000028.1); JAIQWN010000029 (original name was: JAIQWN010000029.1); JAIQWN010000030 (original name was: JAIQWN010000030.1); JAIQWN010000031 (original name was: JAIQWN010000031.1); JAIQWN010000032 (original name was: JAIQWN010000032.1); JAIQWN010000033 (original name was: JAIQWN010000033.1); JAIQWN010000034 (original name was: JAIQWN010000034.1); JAIQWN010000035 (original name was: JAIQWN010000035.1); JAIQWN010000036 (original name was: JAIQWN010000036.1); JAIQWN010000037 (original name was: JAIQWN010000037.1); JAIQWN010000038 (original name was: JAIQWN010000038.1); JAIQWN010000004 (original name was: JAIQWN010000004.1); JAIQWN010000005 (original name was: JAIQWN010000005.1); JAIQWN010000007 (original name was: JAIQWN010000007.1)

Compact view

c00003_JAIQWN0.. - Region 1 - RaS-RiPP

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Location: 33,277 - 51,222 nt. (total: 17,946 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00012_JAIQWN0.. - Region 1 - lanthipeptide-class-i

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Location: 1 - 15,267 nt. (total: 15,267 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

Lanthipeptides

Core peptide predictions

No core peptides found.

c00020_JAIQWN0.. - Region 1 - RRE-containing

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Location: 154,496 - 174,651 nt. (total: 20,156 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00029_JAIQWN0.. - Region 1 - RaS-RiPP

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Location: 61,377 - 83,801 nt. (total: 22,425 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00035_JAIQWN0.. - Region 1 - RiPP-like

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Location: 1 - 14,104 nt. (total: 14,104 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00037_JAIQWN0.. - Region 1 - lanthipeptide-class-iv

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Location: 1 - 14,135 nt. (total: 14,135 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00038_JAIQWN0.. - Region 1 - NRPS-like

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Location: 30,309 - 73,200 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters