GCA_020076145.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQWP010000014 (original name was: JAIQWP010000014.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RRE-containing	5,807	26,931

JAIQWP010000020 (original name was: JAIQWP010000020.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	NRPS-like	1	23,327

JAIQWP010000023 (original name was: JAIQWP010000023.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	RaS-RiPP	1	17,346	streptide	RiPP	100%

JAIQWP010000029 (original name was: JAIQWP010000029.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	lanthipeptide-class-iv	1	13,507

JAIQWP010000002 (original name was: JAIQWP010000002.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	68,677	87,624

JAIQWP010000003 (original name was: JAIQWP010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RaS-RiPP	79,684	97,662

Region	Type	From	To	Most similar known cluster	Similarity
Region 5.1	RRE-containing	5,807	26,931
Region 12.1	NRPS-like	1	23,327
Region 15.1	RaS-RiPP	1	17,346	streptide	RiPP	100%
Region 21.1	lanthipeptide-class-iv	1	13,507
Region 22.1	RiPP-like	68,677	87,624
Region 33.1	RaS-RiPP	79,684	97,662

No secondary metabolite regions were found in these records:: JAIQWP010000010 (original name was: JAIQWP010000010.1); JAIQWP010000011 (original name was: JAIQWP010000011.1); JAIQWP010000012 (original name was: JAIQWP010000012.1); JAIQWP010000013 (original name was: JAIQWP010000013.1); JAIQWP010000015 (original name was: JAIQWP010000015.1); JAIQWP010000016 (original name was: JAIQWP010000016.1); JAIQWP010000017 (original name was: JAIQWP010000017.1); JAIQWP010000018 (original name was: JAIQWP010000018.1); JAIQWP010000019 (original name was: JAIQWP010000019.1); JAIQWP010000001 (original name was: JAIQWP010000001.1); JAIQWP010000021 (original name was: JAIQWP010000021.1); JAIQWP010000022 (original name was: JAIQWP010000022.1); JAIQWP010000024 (original name was: JAIQWP010000024.1); JAIQWP010000025 (original name was: JAIQWP010000025.1); JAIQWP010000026 (original name was: JAIQWP010000026.1); JAIQWP010000027 (original name was: JAIQWP010000027.1); JAIQWP010000028 (original name was: JAIQWP010000028.1); JAIQWP010000030 (original name was: JAIQWP010000030.1); JAIQWP010000031 (original name was: JAIQWP010000031.1); JAIQWP010000032 (original name was: JAIQWP010000032.1); JAIQWP010000033 (original name was: JAIQWP010000033.1); JAIQWP010000034 (original name was: JAIQWP010000034.1); JAIQWP010000035 (original name was: JAIQWP010000035.1); JAIQWP010000036 (original name was: JAIQWP010000036.1); JAIQWP010000037 (original name was: JAIQWP010000037.1); JAIQWP010000038 (original name was: JAIQWP010000038.1); JAIQWP010000039 (original name was: JAIQWP010000039.1); JAIQWP010000040 (original name was: JAIQWP010000040.1); JAIQWP010000041 (original name was: JAIQWP010000041.1); JAIQWP010000042 (original name was: JAIQWP010000042.1); JAIQWP010000043 (original name was: JAIQWP010000043.1); JAIQWP010000044 (original name was: JAIQWP010000044.1); JAIQWP010000045 (original name was: JAIQWP010000045.1); JAIQWP010000046 (original name was: JAIQWP010000046.1); JAIQWP010000004 (original name was: JAIQWP010000004.1); JAIQWP010000047 (original name was: JAIQWP010000047.1); JAIQWP010000048 (original name was: JAIQWP010000048.1); JAIQWP010000049 (original name was: JAIQWP010000049.1); JAIQWP010000050 (original name was: JAIQWP010000050.1); JAIQWP010000051 (original name was: JAIQWP010000051.1); JAIQWP010000052 (original name was: JAIQWP010000052.1); JAIQWP010000053 (original name was: JAIQWP010000053.1); JAIQWP010000005 (original name was: JAIQWP010000005.1); JAIQWP010000006 (original name was: JAIQWP010000006.1); JAIQWP010000007 (original name was: JAIQWP010000007.1); JAIQWP010000008 (original name was: JAIQWP010000008.1); JAIQWP010000009 (original name was: JAIQWP010000009.1)

Compact view

c00005_JAIQWP0.. - Region 1 - RRE-containing

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Location: 5,807 - 26,931 nt. (total: 21,125 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00012_JAIQWP0.. - Region 1 - NRPS-like

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Location: 1 - 23,327 nt. (total: 23,327 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

c00015_JAIQWP0.. - Region 1 - RaS-RiPP

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Location: 1 - 17,346 nt. (total: 17,346 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00021_JAIQWP0.. - Region 1 - lanthipeptide-class-iv

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Location: 1 - 13,507 nt. (total: 13,507 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00022_JAIQWP0.. - Region 1 - RiPP-like

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Location: 68,677 - 87,624 nt. (total: 18,948 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00033_JAIQWP0.. - Region 1 - RaS-RiPP

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Location: 79,684 - 97,662 nt. (total: 17,979 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.