GCA_020076165.1 - 8 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQWS010000001 (original name was: JAIQWS010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	72,923	85,019	asukamycin	Polyketide:Type II	3%

JAIQWS010000020 (original name was: JAIQWS010000020.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	lanthipeptide-class-ii	13,870	34,495	salivaricin A	RiPP:Lanthipeptide	87%

JAIQWS010000024 (original name was: JAIQWS010000024.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	lanthipeptide-class-ii	3,351	26,287

JAIQWS010000033 (original name was: JAIQWS010000033.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	lanthipeptide-class-ii	2,745	19,128	salivaricin 9	RiPP:Lanthipeptide	72%

JAIQWS010000035 (original name was: JAIQWS010000035.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	lanthipeptide-class-iv	781	14,241

JAIQWS010000004 (original name was: JAIQWS010000004.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	RiPP-like	136,321	146,617

JAIQWS010000006 (original name was: JAIQWS010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 56.1	RiPP-like	23,832	42,639

JAIQWS010000008 (original name was: JAIQWS010000008.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 58.1	T3PKS	16,866	58,032

No secondary metabolite regions were found in these records:: JAIQWS010000010 (original name was: JAIQWS010000010.1); JAIQWS010000011 (original name was: JAIQWS010000011.1); JAIQWS010000012 (original name was: JAIQWS010000012.1); JAIQWS010000013 (original name was: JAIQWS010000013.1); JAIQWS010000014 (original name was: JAIQWS010000014.1); JAIQWS010000015 (original name was: JAIQWS010000015.1); JAIQWS010000016 (original name was: JAIQWS010000016.1); JAIQWS010000017 (original name was: JAIQWS010000017.1); JAIQWS010000018 (original name was: JAIQWS010000018.1); JAIQWS010000019 (original name was: JAIQWS010000019.1); JAIQWS010000021 (original name was: JAIQWS010000021.1); JAIQWS010000022 (original name was: JAIQWS010000022.1); JAIQWS010000023 (original name was: JAIQWS010000023.1); JAIQWS010000025 (original name was: JAIQWS010000025.1); JAIQWS010000026 (original name was: JAIQWS010000026.1); JAIQWS010000027 (original name was: JAIQWS010000027.1); JAIQWS010000028 (original name was: JAIQWS010000028.1); JAIQWS010000029 (original name was: JAIQWS010000029.1); JAIQWS010000002 (original name was: JAIQWS010000002.1); JAIQWS010000030 (original name was: JAIQWS010000030.1); JAIQWS010000031 (original name was: JAIQWS010000031.1); JAIQWS010000032 (original name was: JAIQWS010000032.1); JAIQWS010000034 (original name was: JAIQWS010000034.1); JAIQWS010000036 (original name was: JAIQWS010000036.1); JAIQWS010000037 (original name was: JAIQWS010000037.1); JAIQWS010000038 (original name was: JAIQWS010000038.1); JAIQWS010000039 (original name was: JAIQWS010000039.1); JAIQWS010000003 (original name was: JAIQWS010000003.1); JAIQWS010000040 (original name was: JAIQWS010000040.1); JAIQWS010000041 (original name was: JAIQWS010000041.1); JAIQWS010000042 (original name was: JAIQWS010000042.1); JAIQWS010000043 (original name was: JAIQWS010000043.1); JAIQWS010000044 (original name was: JAIQWS010000044.1); JAIQWS010000045 (original name was: JAIQWS010000045.1); JAIQWS010000046 (original name was: JAIQWS010000046.1); JAIQWS010000047 (original name was: JAIQWS010000047.1); JAIQWS010000048 (original name was: JAIQWS010000048.1); JAIQWS010000049 (original name was: JAIQWS010000049.1); JAIQWS010000050 (original name was: JAIQWS010000050.1); JAIQWS010000051 (original name was: JAIQWS010000051.1); JAIQWS010000052 (original name was: JAIQWS010000052.1); JAIQWS010000053 (original name was: JAIQWS010000053.1); JAIQWS010000054 (original name was: JAIQWS010000054.1); JAIQWS010000055 (original name was: JAIQWS010000055.1); JAIQWS010000056 (original name was: JAIQWS010000056.1); JAIQWS010000057 (original name was: JAIQWS010000057.1); JAIQWS010000058 (original name was: JAIQWS010000058.1); JAIQWS010000005 (original name was: JAIQWS010000005.1); JAIQWS010000059 (original name was: JAIQWS010000059.1); JAIQWS010000007 (original name was: JAIQWS010000007.1); JAIQWS010000009 (original name was: JAIQWS010000009.1)

Compact view

c00011_JAIQWS0.. - Region 1 - RiPP-like

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Location: 72,923 - 85,019 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00012_JAIQWS0.. - Region 1 - lanthipeptide-class-ii

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Location: 13,870 - 34,495 nt. (total: 20,626 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg12_19 - Putative Class II

ctg12_18 leader / core peptide: MKNSKDILNNAIEEVSEKELMEVAGG - KRGDhbGWFADhbIDhbDDCPNDhaVFVCC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

ctg12_18 - Class II

Cleavage pHMM score: 4.40

RODEO score: 0

Monoisotopic mass: 2347.1 Da

Molecular weight: 2348.7 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 2366.7 Da N = 1

c00016_JAIQWS0.. - Region 1 - lanthipeptide-class-ii

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Location: 3,351 - 26,287 nt. (total: 22,937 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg16_14 - Putative Class II

ctg16_16 leader / core peptide: MLGNDKVIDSLEFEVAQQELEGSSGA - GDhbRDhbAIRMDhbDhaQGRCGWIFDhbFDhaYECDhaADhaHIRCDha
ctg16_19 leader / core peptide: MSRKSNSPDNGMMESFFG - ILKDhaEMFYRYGKMFKDhaLKQLEQAIVDYINYYNQRINVKLKLDhaDhaPGDhbYHQDhbWEDhaLCQKGDhaL
ctg16_20 leader / core peptide: MINKEEHEVIDSLEFEVSNQELEGQSGA - GWWDhbAIDhaLDhbADhaGRCGHVFDhbADhaFECDhbDhaNNVRCK
allorf_25922_26038 leader / core peptide: LVNILKSGVGA - DhbGDLDhaRDhaFPNHIPDDhaHDVFHCNYDhaGYL

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

ctg16_16 - Class II

Cleavage pHMM score: 0.20

RODEO score: 0

Monoisotopic mass: 3449.7 Da

Molecular weight: 3451.9 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 3469.9 Da N = 1; 3487.9 Da N = 2; 3506.0 Da N = 3; 3524.0 Da N = 4; 3542.0 Da N = 5; 3560.0 Da N = 6

ctg16_19 - Class II

Cleavage pHMM score: -3.20

RODEO score: 0

Monoisotopic mass: 7033.7 Da

Molecular weight: 7038.1 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 7056.1 Da N = 1; 7074.1 Da N = 2; 7092.2 Da N = 3; 7110.2 Da N = 4; 7128.2 Da N = 5; 7146.2 Da N = 6; 7164.2 Da N = 7

ctg16_20 - Class II

Cleavage pHMM score: -2.90

RODEO score: 0

Monoisotopic mass: 3344.6 Da

Molecular weight: 3346.7 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 3364.8 Da N = 1; 3382.8 Da N = 2; 3400.8 Da N = 3; 3418.8 Da N = 4; 3436.8 Da N = 5

allorf_25922_26038 - Class II

Cleavage pHMM score: -4.20

RODEO score: 0

Monoisotopic mass: 2987.4 Da

Molecular weight: 2989.2 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 3007.2 Da N = 1; 3025.2 Da N = 2; 3043.2 Da N = 3; 3061.3 Da N = 4

c00026_JAIQWS0.. - Region 1 - lanthipeptide-class-ii

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Location: 2,745 - 19,128 nt. (total: 16,384 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg26_11 - Putative Class II

ctg26_12 leader / core peptide: MKSTNNQSIAEIAAVNSLQEVSMEELDQIIGA - GNGVVLDhbLDhbHECNLADhbWDhbKKLKCC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

ctg26_12 - Class II

Cleavage pHMM score: 5.20

RODEO score: 0

Monoisotopic mass: 2559.3 Da

Molecular weight: 2561.0 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 2579.1 Da N = 1

c00028_JAIQWS0.. - Region 1 - lanthipeptide-class-iv

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Location: 781 - 14,241 nt. (total: 13,461 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00043_JAIQWS0.. - Region 1 - RiPP-like

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Location: 136,321 - 146,617 nt. (total: 10,297 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00056_JAIQWS0.. - Region 1 - RiPP-like

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Location: 23,832 - 42,639 nt. (total: 18,808 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00058_JAIQWS0.. - Region 1 - T3PKS

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Location: 16,866 - 58,032 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.