GCA_020076165.1 - 2 region(s)

Identified primary metabolite regions

JAIQWS010000010 (original name was: JAIQWS010000010.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	TPP_AA_metabolism	Putative	1	20,485

JAIQWS010000005 (original name was: JAIQWS010000005.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 54.1	Oxidative_glycerol	Other	34,213	58,429

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 1.1	TPP_AA_metabolism	Putative	1	20,485
Region 54.1	Oxidative_glycerol	Other	34,213	58,429

No primary metabolite regions were found in these records:: JAIQWS010000011 (original name was: JAIQWS010000011.1); JAIQWS010000012 (original name was: JAIQWS010000012.1); JAIQWS010000013 (original name was: JAIQWS010000013.1); JAIQWS010000014 (original name was: JAIQWS010000014.1); JAIQWS010000015 (original name was: JAIQWS010000015.1); JAIQWS010000016 (original name was: JAIQWS010000016.1); JAIQWS010000017 (original name was: JAIQWS010000017.1); JAIQWS010000018 (original name was: JAIQWS010000018.1); JAIQWS010000019 (original name was: JAIQWS010000019.1); JAIQWS010000001 (original name was: JAIQWS010000001.1); JAIQWS010000020 (original name was: JAIQWS010000020.1); JAIQWS010000021 (original name was: JAIQWS010000021.1); JAIQWS010000022 (original name was: JAIQWS010000022.1); JAIQWS010000023 (original name was: JAIQWS010000023.1); JAIQWS010000024 (original name was: JAIQWS010000024.1); JAIQWS010000025 (original name was: JAIQWS010000025.1); JAIQWS010000026 (original name was: JAIQWS010000026.1); JAIQWS010000027 (original name was: JAIQWS010000027.1); JAIQWS010000028 (original name was: JAIQWS010000028.1); JAIQWS010000029 (original name was: JAIQWS010000029.1); JAIQWS010000002 (original name was: JAIQWS010000002.1); JAIQWS010000030 (original name was: JAIQWS010000030.1); JAIQWS010000031 (original name was: JAIQWS010000031.1); JAIQWS010000032 (original name was: JAIQWS010000032.1); JAIQWS010000033 (original name was: JAIQWS010000033.1); JAIQWS010000034 (original name was: JAIQWS010000034.1); JAIQWS010000035 (original name was: JAIQWS010000035.1); JAIQWS010000036 (original name was: JAIQWS010000036.1); JAIQWS010000037 (original name was: JAIQWS010000037.1); JAIQWS010000038 (original name was: JAIQWS010000038.1); JAIQWS010000039 (original name was: JAIQWS010000039.1); JAIQWS010000003 (original name was: JAIQWS010000003.1); JAIQWS010000040 (original name was: JAIQWS010000040.1); JAIQWS010000041 (original name was: JAIQWS010000041.1); JAIQWS010000042 (original name was: JAIQWS010000042.1); JAIQWS010000043 (original name was: JAIQWS010000043.1); JAIQWS010000044 (original name was: JAIQWS010000044.1); JAIQWS010000045 (original name was: JAIQWS010000045.1); JAIQWS010000046 (original name was: JAIQWS010000046.1); JAIQWS010000047 (original name was: JAIQWS010000047.1); JAIQWS010000048 (original name was: JAIQWS010000048.1); JAIQWS010000004 (original name was: JAIQWS010000004.1); JAIQWS010000049 (original name was: JAIQWS010000049.1); JAIQWS010000050 (original name was: JAIQWS010000050.1); JAIQWS010000051 (original name was: JAIQWS010000051.1); JAIQWS010000052 (original name was: JAIQWS010000052.1); JAIQWS010000053 (original name was: JAIQWS010000053.1); JAIQWS010000054 (original name was: JAIQWS010000054.1); JAIQWS010000055 (original name was: JAIQWS010000055.1); JAIQWS010000056 (original name was: JAIQWS010000056.1); JAIQWS010000057 (original name was: JAIQWS010000057.1); JAIQWS010000058 (original name was: JAIQWS010000058.1); JAIQWS010000059 (original name was: JAIQWS010000059.1); JAIQWS010000006 (original name was: JAIQWS010000006.1); JAIQWS010000007 (original name was: JAIQWS010000007.1); JAIQWS010000008 (original name was: JAIQWS010000008.1); JAIQWS010000009 (original name was: JAIQWS010000009.1)

Compact view

c00001_JAIQWS0.. - Region 1 - TPP_AA_metabolism

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Location: 1 - 20,485 nt. (total: 20,485 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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c00054_JAIQWS0.. - Region 1 - Oxidative_glycerol