GCA_020076365.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAIQXB010000011 (original name was: JAIQXB010000011.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RaS-RiPP	1	18,093

JAIQXB010000001 (original name was: JAIQXB010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	51,855	70,802

JAIQXB010000053 (original name was: JAIQXB010000053.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 48.1	NRPS-like	1	6,708

JAIQXB010000006 (original name was: JAIQXB010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	RRE-containing	4,932	26,056

Region	Type	From	To	Similarity
Region 2.1	RaS-RiPP	1	18,093
Region 11.1	RiPP-like	51,855	70,802
Region 48.1	NRPS-like	1	6,708
Region 62.1	RRE-containing	4,932	26,056

No secondary metabolite regions were found in these records:: JAIQXB010000010 (original name was: JAIQXB010000010.1); JAIQXB010000012 (original name was: JAIQXB010000012.1); JAIQXB010000013 (original name was: JAIQXB010000013.1); JAIQXB010000014 (original name was: JAIQXB010000014.1); JAIQXB010000015 (original name was: JAIQXB010000015.1); JAIQXB010000016 (original name was: JAIQXB010000016.1); JAIQXB010000017 (original name was: JAIQXB010000017.1); JAIQXB010000018 (original name was: JAIQXB010000018.1); JAIQXB010000019 (original name was: JAIQXB010000019.1); JAIQXB010000020 (original name was: JAIQXB010000020.1); JAIQXB010000021 (original name was: JAIQXB010000021.1); JAIQXB010000022 (original name was: JAIQXB010000022.1); JAIQXB010000023 (original name was: JAIQXB010000023.1); JAIQXB010000024 (original name was: JAIQXB010000024.1); JAIQXB010000025 (original name was: JAIQXB010000025.1); JAIQXB010000026 (original name was: JAIQXB010000026.1); JAIQXB010000027 (original name was: JAIQXB010000027.1); JAIQXB010000028 (original name was: JAIQXB010000028.1); JAIQXB010000029 (original name was: JAIQXB010000029.1); JAIQXB010000002 (original name was: JAIQXB010000002.1); JAIQXB010000030 (original name was: JAIQXB010000030.1); JAIQXB010000031 (original name was: JAIQXB010000031.1); JAIQXB010000032 (original name was: JAIQXB010000032.1); JAIQXB010000033 (original name was: JAIQXB010000033.1); JAIQXB010000034 (original name was: JAIQXB010000034.1); JAIQXB010000035 (original name was: JAIQXB010000035.1); JAIQXB010000036 (original name was: JAIQXB010000036.1); JAIQXB010000037 (original name was: JAIQXB010000037.1); JAIQXB010000038 (original name was: JAIQXB010000038.1); JAIQXB010000039 (original name was: JAIQXB010000039.1); JAIQXB010000003 (original name was: JAIQXB010000003.1); JAIQXB010000040 (original name was: JAIQXB010000040.1); JAIQXB010000041 (original name was: JAIQXB010000041.1); JAIQXB010000042 (original name was: JAIQXB010000042.1); JAIQXB010000043 (original name was: JAIQXB010000043.1); JAIQXB010000044 (original name was: JAIQXB010000044.1); JAIQXB010000045 (original name was: JAIQXB010000045.1); JAIQXB010000046 (original name was: JAIQXB010000046.1); JAIQXB010000047 (original name was: JAIQXB010000047.1); JAIQXB010000048 (original name was: JAIQXB010000048.1); JAIQXB010000004 (original name was: JAIQXB010000004.1); JAIQXB010000049 (original name was: JAIQXB010000049.1); JAIQXB010000050 (original name was: JAIQXB010000050.1); JAIQXB010000051 (original name was: JAIQXB010000051.1); JAIQXB010000052 (original name was: JAIQXB010000052.1); JAIQXB010000054 (original name was: JAIQXB010000054.1); JAIQXB010000055 (original name was: JAIQXB010000055.1); JAIQXB010000056 (original name was: JAIQXB010000056.1); JAIQXB010000057 (original name was: JAIQXB010000057.1); JAIQXB010000005 (original name was: JAIQXB010000005.1); JAIQXB010000058 (original name was: JAIQXB010000058.1); JAIQXB010000059 (original name was: JAIQXB010000059.1); JAIQXB010000060 (original name was: JAIQXB010000060.1); JAIQXB010000061 (original name was: JAIQXB010000061.1); JAIQXB010000062 (original name was: JAIQXB010000062.1); JAIQXB010000063 (original name was: JAIQXB010000063.1); JAIQXB010000064 (original name was: JAIQXB010000064.1); JAIQXB010000065 (original name was: JAIQXB010000065.1); JAIQXB010000007 (original name was: JAIQXB010000007.1); JAIQXB010000008 (original name was: JAIQXB010000008.1); JAIQXB010000009 (original name was: JAIQXB010000009.1)

Compact view

c00002_JAIQXB0.. - Region 1 - RaS-RiPP

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Location: 1 - 18,093 nt. (total: 18,093 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00011_JAIQXB0.. - Region 1 - RiPP-like

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Location: 51,855 - 70,802 nt. (total: 18,948 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00048_JAIQXB0.. - Region 1 - NRPS-like

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Location: 1 - 6,708 nt. (total: 6,708 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

c00062_JAIQXB0.. - Region 1 - RRE-containing

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Location: 4,932 - 26,056 nt. (total: 21,125 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.