GCA_020131335.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAHBMN010000010 (original name was: JAHBMN010000010.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	lanthipeptide-class-ii	8,243	25,988

JAHBMN010000002 (original name was: JAHBMN010000002.1)

Region	Type	From	To
Region 8.1	RiPP-like	426,119	438,269
Region 8.2	T3PKS	1,947,849	1,989,018
Region 8.3	terpene	2,992,230	3,013,111
Region 8.4	cyclic-lactone-autoinducer	3,263,756	3,284,461

Region	Type	From	To	Similarity
Region 2.1	lanthipeptide-class-ii	8,243	25,988
Region 8.1	RiPP-like	426,119	438,269
Region 8.2	T3PKS	1,947,849	1,989,018
Region 8.3	terpene	2,992,230	3,013,111
Region 8.4	cyclic-lactone-autoinducer	3,263,756	3,284,461

Compact view

c00002_JAHBMN0.. - Region 1 - lanthipeptide-class-ii

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Location: 8,243 - 25,988 nt. (total: 17,746 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg2_19 - Putative Class II

ctg2_18 leader / core peptide: MKKNLMNSAEESSGNVLEELNNAQLGMISGG - KKDhbKKNDhaDhaGDICDhbLDhbDhaECDHLADhbWVCC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

ctg2_18 - Class II

Cleavage pHMM score: -2.30

RODEO score: 0

Monoisotopic mass: 2844.4 Da

Molecular weight: 2846.3 Da

Number of bridges: 4

Alternative weights: (assuming N unmodified Ser/Thr residues); 2864.3 Da N = 1; 2882.3 Da N = 2; 2900.3 Da N = 3

c00008_JAHBMN0.. - Region 1 - RiPP-like

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Location: 426,119 - 438,269 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00008_JAHBMN0.. - Region 2 - T3PKS

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Location: 1,947,849 - 1,989,018 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00008_JAHBMN0.. - Region 3 - terpene

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Location: 2,992,230 - 3,013,111 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00008_JAHBMN0.. - Region 4 - cyclic-lactone-autoinducer

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Location: 3,263,756 - 3,284,461 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.