GCA_020509345.1 - 6 region(s)

Identified primary metabolite regions

MPOQ01000100.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 3.1	fatty_acids-unassigned	Putative	1	15,440	Acetate to butyrate C. sporogenes	BUT	50%

MPOQ01000110.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 13.1	hydroxybenzoate2phenol	Aromatic	1	14,927	hydroxybenzoate2phenol K. pneumoniae	PHE	100%

MPOQ01000012.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 23.1	Nitrate_reductase,Putrescine2spermidine	Aliphatic_amine	2,957	48,992	Nitrate reductase E. coli	NIR	60%

MPOQ01000014.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 43.1	histidine2glutamate_hutHGIU_operon	Other	27,181	47,933	Histidine to glutamate K. pneumoniae	GLU	60%

MPOQ01000038.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 145.1	fatty_acids-unassigned	Putative	1	9,844	Acetate to butyrate C. sporogenes	BUT	33%

MPOQ01000071.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 176.1	Fumarate2succinate,TPP_fatty_acids,TPP_AA_metabolism	Putative	69,694	104,102	Acetate to butyrate C. sporogenes	BUT	33%

No primary metabolite regions were found in these records:: MPOQ01000001.1; MPOQ01000010.1; MPOQ01000101.1; MPOQ01000103.1; MPOQ01000104.1; MPOQ01000105.1; MPOQ01000106.1; MPOQ01000107.1; MPOQ01000108.1; MPOQ01000109.1; MPOQ01000011.1; MPOQ01000111.1; MPOQ01000112.1; MPOQ01000113.1; MPOQ01000114.1; MPOQ01000115.1; MPOQ01000116.1; MPOQ01000117.1; MPOQ01000118.1; MPOQ01000119.1; MPOQ01000120.1; MPOQ01000121.1; MPOQ01000122.1; MPOQ01000124.1; MPOQ01000125.1; MPOQ01000126.1; MPOQ01000127.1; MPOQ01000128.1; MPOQ01000129.1; MPOQ01000013.1; MPOQ01000130.1; MPOQ01000131.1; MPOQ01000132.1; MPOQ01000133.1; MPOQ01000135.1; MPOQ01000136.1; MPOQ01000137.1; MPOQ01000138.1; MPOQ01000139.1; MPOQ01000141.1; MPOQ01000145.1; MPOQ01000146.1; MPOQ01000147.1; MPOQ01000148.1; MPOQ01000149.1; MPOQ01000015.1; MPOQ01000151.1; MPOQ01000152.1; MPOQ01000154.1; MPOQ01000155.1; MPOQ01000157.1; MPOQ01000158.1; MPOQ01000159.1; MPOQ01000016.1; MPOQ01000160.1; MPOQ01000161.1; MPOQ01000163.1; MPOQ01000165.1; MPOQ01000166.1; MPOQ01000167.1; MPOQ01000168.1; MPOQ01000169.1; MPOQ01000017.1; MPOQ01000170.1; MPOQ01000171.1; MPOQ01000172.1; MPOQ01000173.1; MPOQ01000174.1; MPOQ01000175.1; MPOQ01000176.1; MPOQ01000177.1; MPOQ01000018.1; MPOQ01000180.1; MPOQ01000181.1; MPOQ01000182.1; MPOQ01000183.1; MPOQ01000184.1; MPOQ01000186.1; MPOQ01000187.1; MPOQ01000188.1; MPOQ01000019.1; MPOQ01000190.1; MPOQ01000191.1; MPOQ01000192.1; MPOQ01000193.1; MPOQ01000194.1; MPOQ01000195.1; MPOQ01000196.1; MPOQ01000197.1; MPOQ01000198.1; MPOQ01000199.1; MPOQ01000020.1; MPOQ01000201.1; MPOQ01000202.1; MPOQ01000203.1; MPOQ01000206.1; MPOQ01000207.1; MPOQ01000208.1; MPOQ01000209.1; MPOQ01000021.1; MPOQ01000210.1; MPOQ01000211.1; MPOQ01000212.1; MPOQ01000213.1; MPOQ01000214.1; MPOQ01000216.1; MPOQ01000218.1; MPOQ01000022.1; MPOQ01000220.1; MPOQ01000222.1; MPOQ01000225.1; MPOQ01000227.1; MPOQ01000228.1; MPOQ01000229.1; MPOQ01000023.1; MPOQ01000230.1; MPOQ01000233.1; MPOQ01000235.1; MPOQ01000237.1; MPOQ01000238.1; MPOQ01000024.1; MPOQ01000245.1; MPOQ01000246.1; MPOQ01000247.1; MPOQ01000025.1; MPOQ01000250.1; MPOQ01000254.1; MPOQ01000026.1; MPOQ01000027.1; MPOQ01000028.1; MPOQ01000029.1; MPOQ01000003.1; MPOQ01000030.1; MPOQ01000031.1; MPOQ01000032.1; MPOQ01000033.1; MPOQ01000034.1; MPOQ01000035.1; MPOQ01000036.1; MPOQ01000037.1; MPOQ01000039.1; MPOQ01000004.1; MPOQ01000041.1; MPOQ01000042.1; MPOQ01000045.1; MPOQ01000046.1; MPOQ01000048.1; MPOQ01000049.1; MPOQ01000005.1; MPOQ01000051.1; MPOQ01000052.1; MPOQ01000053.1; MPOQ01000054.1; MPOQ01000055.1; MPOQ01000056.1; MPOQ01000057.1; MPOQ01000058.1; MPOQ01000059.1; MPOQ01000006.1; MPOQ01000060.1; MPOQ01000061.1; MPOQ01000062.1; MPOQ01000063.1; MPOQ01000064.1; MPOQ01000066.1; MPOQ01000067.1; MPOQ01000068.1; MPOQ01000069.1; MPOQ01000007.1; MPOQ01000070.1; MPOQ01000072.1; MPOQ01000073.1; MPOQ01000076.1; MPOQ01000077.1; MPOQ01000078.1; MPOQ01000079.1; MPOQ01000008.1; MPOQ01000080.1; MPOQ01000081.1; MPOQ01000082.1; MPOQ01000083.1; MPOQ01000084.1; MPOQ01000085.1; MPOQ01000086.1; MPOQ01000087.1; MPOQ01000088.1; MPOQ01000089.1; MPOQ01000009.1; MPOQ01000090.1; MPOQ01000091.1; MPOQ01000092.1; MPOQ01000093.1; MPOQ01000094.1; MPOQ01000095.1; MPOQ01000096.1; MPOQ01000097.1; MPOQ01000098.1; MPOQ01000099.1

Compact view

MPOQ01000100.1 - Region 1 - fatty_acids-unassigned

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Location: 1 - 15,440 nt. (total: 15,440 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

MPOQ01000110.1 - Region 1 - hydroxybenzoate2phenol

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Location: 1 - 14,927 nt. (total: 14,927 nt) Show pHMM detection rules used

Region on contig edge.

hydroxybenzoate2phenol: (Flavoprotein and Phea_decarb and not ubi_syn)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

MPOQ01000012.1 - Region 1 - Nitrate_reductase,Putrescine2spermidine

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Location: 2,957 - 48,992 nt. (total: 46,036 nt) Show pHMM detection rules used

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))
Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

MPOQ01000014.1 - Region 1 - histidine2glutamate_hutHGIU_operon

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Location: 27,181 - 47,933 nt. (total: 20,753 nt) Show pHMM detection rules used

Region on contig edge.

histidine2glutamate_hutHGIU_operon: (minimum(3, [Amidohydro_1, Amidohydro_3, Arginase, FGase, Urocanase]) and Lyase_aromatic and Urocanase_C)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

MPOQ01000038.1 - Region 1 - fatty_acids-unassigned

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Location: 1 - 9,844 nt. (total: 9,844 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

MPOQ01000071.1 - Region 1 - Fumarate2succinate,TPP_AA_metabolism,TPP_fatty_acids

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Location: 69,694 - 104,102 nt. (total: 34,409 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))
TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))
TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters