Select genomic region:
Overview
22.1
44.1
47.1

### Identified primary metabolite regions

QQTK01000011.1

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 22.1 | fatty_acids-unassigned | Putative | 4,127 | 35,000 |

QQTK01000001.1

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 44.1 | Arginine2_Hcarbonate | Other | 56,903 | 80,133 | Arginine to hydrogen carbonate P. aeruginosa | ARG | 100%

QQTK01000022.1

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 47.1 | Nitrate_reductase | E-MGC | 11,872 | 29,213 | Nitrate reductase E. coli | NIR | 40%

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 22.1 | fatty_acids-unassigned | Putative | 4,127 | 35,000 |
Region 44.1 | Arginine2_Hcarbonate | Other | 56,903 | 80,133 | Arginine to hydrogen carbonate P. aeruginosa | ARG | 100%
Region 47.1 | Nitrate_reductase | E-MGC | 11,872 | 29,213 | Nitrate reductase E. coli | NIR | 40%

No primary metabolite regions were found in these records:
  QQTK01000099.1
  QQTK01000100.1
  QQTK01000101.1
  QQTK01000102.1
  QQTK01000103.1
  QQTK01000104.1
  QQTK01000105.1
  QQTK01000106.1
  QQTK01000107.1
  QQTK01000108.1
  QQTK01000010.1
  QQTK01000109.1
  QQTK01000110.1
  QQTK01000111.1
  QQTK01000112.1
  QQTK01000113.1
  QQTK01000114.1
  QQTK01000115.1
  QQTK01000116.1
  QQTK01000117.1
  QQTK01000118.1
  QQTK01000119.1
  QQTK01000120.1
  QQTK01000121.1
  QQTK01000122.1
  QQTK01000123.1
  QQTK01000124.1
  QQTK01000125.1
  QQTK01000126.1
  QQTK01000127.1
  QQTK01000012.1
  QQTK01000128.1
  QQTK01000129.1
  QQTK01000130.1
  QQTK01000131.1
  QQTK01000013.1
  QQTK01000014.1
  QQTK01000015.1
  QQTK01000016.1
  QQTK01000017.1
  QQTK01000018.1
  QQTK01000019.1
  QQTK01000020.1
  QQTK01000021.1
  QQTK01000023.1
  QQTK01000024.1
  QQTK01000025.1
  QQTK01000026.1
  QQTK01000027.1
  QQTK01000028.1
  QQTK01000029.1
  QQTK01000002.1
  QQTK01000030.1
  QQTK01000031.1
  QQTK01000032.1
  QQTK01000033.1
  QQTK01000034.1
  QQTK01000035.1
  QQTK01000036.1
  QQTK01000037.1
  QQTK01000038.1
  QQTK01000039.1
  QQTK01000003.1
  QQTK01000040.1
  QQTK01000041.1
  QQTK01000042.1
  QQTK01000043.1
  QQTK01000044.1
  QQTK01000045.1
  QQTK01000046.1
  QQTK01000047.1
  QQTK01000048.1
  QQTK01000049.1
  QQTK01000004.1
  QQTK01000050.1
  QQTK01000051.1
  QQTK01000052.1
  QQTK01000053.1
  QQTK01000054.1
  QQTK01000055.1
  QQTK01000056.1
  QQTK01000057.1
  QQTK01000058.1
  QQTK01000059.1
  QQTK01000005.1
  QQTK01000060.1
  QQTK01000061.1
  QQTK01000062.1
  QQTK01000063.1
  QQTK01000064.1
  QQTK01000065.1
  QQTK01000066.1
  QQTK01000067.1
  QQTK01000068.1
  QQTK01000069.1
  QQTK01000006.1
  QQTK01000070.1
  QQTK01000071.1
  QQTK01000072.1
  QQTK01000073.1
  QQTK01000074.1
  QQTK01000075.1
  QQTK01000076.1
  QQTK01000077.1
  QQTK01000078.1
  QQTK01000007.1
  QQTK01000079.1
  QQTK01000080.1
  QQTK01000081.1
  QQTK01000082.1
  QQTK01000083.1
  QQTK01000084.1
  QQTK01000085.1
  QQTK01000086.1
  QQTK01000087.1
  QQTK01000088.1
  QQTK01000008.1
  QQTK01000089.1
  QQTK01000090.1
  QQTK01000091.1
  QQTK01000092.1
  QQTK01000093.1
  QQTK01000094.1
  QQTK01000095.1
  QQTK01000096.1
  QQTK01000097.1
  QQTK01000098.1
  QQTK01000009.1

Compact view
QQTK01000011.1 - Region 1 - fatty_acids-unassigned
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 4,127 - 35,000 nt. (total: 30,874 nt) Show pHMM detection rules used
fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.

No matches found.

QQTK01000001.1 - Region 1 - Arginine2_Hcarbonate
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 56,903 - 80,133 nt. (total: 23,231 nt) Show pHMM detection rules used
Arginine2_Hcarbonate: (Amidinotransf and OTCace and OTCace_N and AA_kinase)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
QQTK01000022.1 - Region 1 - Nitrate_reductase
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 11,872 - 29,213 nt. (total: 17,342 nt) Show pHMM detection rules used
Region on contig edge.
Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.