GCA_020526225.1 - 3 region(s)

Identified primary metabolite regions

JAHXEK010000010 (original name was: JAHXEK010000010.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	Pyruvate2acetate-formate	SCFA	128,861	152,239	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JAHXEK010000014 (original name was: JAHXEK010000014.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 6.1	Others_HGD_unassigned	Putative	50,213	74,971

JAHXEK010000007 (original name was: JAHXEK010000007.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 29.1	Fumarate2succinate	SCFA	165,680	188,590	Fumarate2succinate suc dh E. coli	SUC	100%

No primary metabolite regions were found in these records:: JAHXEK010000001 (original name was: JAHXEK010000001.1); JAHXEK010000011 (original name was: JAHXEK010000011.1); JAHXEK010000012 (original name was: JAHXEK010000012.1); JAHXEK010000013 (original name was: JAHXEK010000013.1); JAHXEK010000015 (original name was: JAHXEK010000015.1); JAHXEK010000016 (original name was: JAHXEK010000016.1); JAHXEK010000017 (original name was: JAHXEK010000017.1); JAHXEK010000018 (original name was: JAHXEK010000018.1); JAHXEK010000019 (original name was: JAHXEK010000019.1); JAHXEK010000002 (original name was: JAHXEK010000002.1); JAHXEK010000020 (original name was: JAHXEK010000020.1); JAHXEK010000021 (original name was: JAHXEK010000021.1); JAHXEK010000022 (original name was: JAHXEK010000022.1); JAHXEK010000024 (original name was: JAHXEK010000024.1); JAHXEK010000025 (original name was: JAHXEK010000025.1); JAHXEK010000027 (original name was: JAHXEK010000027.1); JAHXEK010000028 (original name was: JAHXEK010000028.1); JAHXEK010000029 (original name was: JAHXEK010000029.1); JAHXEK010000003 (original name was: JAHXEK010000003.1); JAHXEK010000030 (original name was: JAHXEK010000030.1); JAHXEK010000031 (original name was: JAHXEK010000031.1); JAHXEK010000032 (original name was: JAHXEK010000032.1); JAHXEK010000033 (original name was: JAHXEK010000033.1); JAHXEK010000004 (original name was: JAHXEK010000004.1); JAHXEK010000005 (original name was: JAHXEK010000005.1); JAHXEK010000006 (original name was: JAHXEK010000006.1); JAHXEK010000008 (original name was: JAHXEK010000008.1); JAHXEK010000009 (original name was: JAHXEK010000009.1)

Compact view

c00002_JAHXEK0.. - Region 1 - Pyruvate2acetate-formate

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Location: 128,861 - 152,239 nt. (total: 23,379 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00006_JAHXEK0.. - Region 1 - Others_HGD_unassigned

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Location: 50,213 - 74,971 nt. (total: 24,759 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00029_JAHXEK0.. - Region 1 - Fumarate2succinate

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Location: 165,680 - 188,590 nt. (total: 22,911 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters