GCA_020539025.1 - 2 region(s)

Identified primary metabolite regions

JAJBPP010000010 (original name was: JAJBPP010000010.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	Others_HGD_unassigned	Putative	71,477	93,797

JAJBPP010000030 (original name was: JAJBPP010000030.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 24.1	Pyruvate2acetate-formate	SCFA	1	20,062	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 2.1	Others_HGD_unassigned	Putative	71,477	93,797
Region 24.1	Pyruvate2acetate-formate	SCFA	1	20,062	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: JAJBPP010000001 (original name was: JAJBPP010000001.1); JAJBPP010000011 (original name was: JAJBPP010000011.1); JAJBPP010000012 (original name was: JAJBPP010000012.1); JAJBPP010000013 (original name was: JAJBPP010000013.1); JAJBPP010000014 (original name was: JAJBPP010000014.1); JAJBPP010000015 (original name was: JAJBPP010000015.1); JAJBPP010000016 (original name was: JAJBPP010000016.1); JAJBPP010000017 (original name was: JAJBPP010000017.1); JAJBPP010000018 (original name was: JAJBPP010000018.1); JAJBPP010000019 (original name was: JAJBPP010000019.1); JAJBPP010000002 (original name was: JAJBPP010000002.1); JAJBPP010000020 (original name was: JAJBPP010000020.1); JAJBPP010000021 (original name was: JAJBPP010000021.1); JAJBPP010000022 (original name was: JAJBPP010000022.1); JAJBPP010000023 (original name was: JAJBPP010000023.1); JAJBPP010000024 (original name was: JAJBPP010000024.1); JAJBPP010000025 (original name was: JAJBPP010000025.1); JAJBPP010000026 (original name was: JAJBPP010000026.1); JAJBPP010000027 (original name was: JAJBPP010000027.1); JAJBPP010000028 (original name was: JAJBPP010000028.1); JAJBPP010000029 (original name was: JAJBPP010000029.1); JAJBPP010000003 (original name was: JAJBPP010000003.1); JAJBPP010000031 (original name was: JAJBPP010000031.1); JAJBPP010000032 (original name was: JAJBPP010000032.1); JAJBPP010000033 (original name was: JAJBPP010000033.1); JAJBPP010000034 (original name was: JAJBPP010000034.1); JAJBPP010000035 (original name was: JAJBPP010000035.1); JAJBPP010000036 (original name was: JAJBPP010000036.1); JAJBPP010000037 (original name was: JAJBPP010000037.1); JAJBPP010000038 (original name was: JAJBPP010000038.1); JAJBPP010000004 (original name was: JAJBPP010000004.1); JAJBPP010000039 (original name was: JAJBPP010000039.1); JAJBPP010000040 (original name was: JAJBPP010000040.1); JAJBPP010000041 (original name was: JAJBPP010000041.1); JAJBPP010000042 (original name was: JAJBPP010000042.1); JAJBPP010000043 (original name was: JAJBPP010000043.1); JAJBPP010000044 (original name was: JAJBPP010000044.1); JAJBPP010000005 (original name was: JAJBPP010000005.1); JAJBPP010000006 (original name was: JAJBPP010000006.1); JAJBPP010000007 (original name was: JAJBPP010000007.1); JAJBPP010000008 (original name was: JAJBPP010000008.1); JAJBPP010000009 (original name was: JAJBPP010000009.1)

Compact view

c00002_JAJBPP0.. - Region 1 - Others_HGD_unassigned

Download region GenBank file

Location: 71,477 - 93,797 nt. (total: 22,321 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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c00024_JAJBPP0.. - Region 1 - Pyruvate2acetate-formate