GCA_020539085.1 - 2 region(s)

Identified primary metabolite regions

JAJBPQ010000010 (original name was: JAJBPQ010000010.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	Others_HGD_unassigned	Putative	1	22,321

JAJBPQ010000030 (original name was: JAJBPQ010000030.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 24.1	Pyruvate2acetate-formate	SCFA	1	20,062	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 2.1	Others_HGD_unassigned	Putative	1	22,321
Region 24.1	Pyruvate2acetate-formate	SCFA	1	20,062	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: JAJBPQ010000001 (original name was: JAJBPQ010000001.1); JAJBPQ010000011 (original name was: JAJBPQ010000011.1); JAJBPQ010000012 (original name was: JAJBPQ010000012.1); JAJBPQ010000013 (original name was: JAJBPQ010000013.1); JAJBPQ010000014 (original name was: JAJBPQ010000014.1); JAJBPQ010000015 (original name was: JAJBPQ010000015.1); JAJBPQ010000016 (original name was: JAJBPQ010000016.1); JAJBPQ010000017 (original name was: JAJBPQ010000017.1); JAJBPQ010000018 (original name was: JAJBPQ010000018.1); JAJBPQ010000019 (original name was: JAJBPQ010000019.1); JAJBPQ010000002 (original name was: JAJBPQ010000002.1); JAJBPQ010000020 (original name was: JAJBPQ010000020.1); JAJBPQ010000021 (original name was: JAJBPQ010000021.1); JAJBPQ010000022 (original name was: JAJBPQ010000022.1); JAJBPQ010000023 (original name was: JAJBPQ010000023.1); JAJBPQ010000024 (original name was: JAJBPQ010000024.1); JAJBPQ010000025 (original name was: JAJBPQ010000025.1); JAJBPQ010000026 (original name was: JAJBPQ010000026.1); JAJBPQ010000027 (original name was: JAJBPQ010000027.1); JAJBPQ010000028 (original name was: JAJBPQ010000028.1); JAJBPQ010000029 (original name was: JAJBPQ010000029.1); JAJBPQ010000003 (original name was: JAJBPQ010000003.1); JAJBPQ010000031 (original name was: JAJBPQ010000031.1); JAJBPQ010000032 (original name was: JAJBPQ010000032.1); JAJBPQ010000033 (original name was: JAJBPQ010000033.1); JAJBPQ010000034 (original name was: JAJBPQ010000034.1); JAJBPQ010000035 (original name was: JAJBPQ010000035.1); JAJBPQ010000036 (original name was: JAJBPQ010000036.1); JAJBPQ010000037 (original name was: JAJBPQ010000037.1); JAJBPQ010000038 (original name was: JAJBPQ010000038.1); JAJBPQ010000004 (original name was: JAJBPQ010000004.1); JAJBPQ010000039 (original name was: JAJBPQ010000039.1); JAJBPQ010000040 (original name was: JAJBPQ010000040.1); JAJBPQ010000041 (original name was: JAJBPQ010000041.1); JAJBPQ010000042 (original name was: JAJBPQ010000042.1); JAJBPQ010000043 (original name was: JAJBPQ010000043.1); JAJBPQ010000044 (original name was: JAJBPQ010000044.1); JAJBPQ010000045 (original name was: JAJBPQ010000045.1); JAJBPQ010000005 (original name was: JAJBPQ010000005.1); JAJBPQ010000006 (original name was: JAJBPQ010000006.1); JAJBPQ010000007 (original name was: JAJBPQ010000007.1); JAJBPQ010000008 (original name was: JAJBPQ010000008.1); JAJBPQ010000009 (original name was: JAJBPQ010000009.1)

Compact view

c00002_JAJBPQ0.. - Region 1 - Others_HGD_unassigned

Download region GenBank file

Location: 1 - 22,321 nt. (total: 22,321 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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c00024_JAJBPQ0.. - Region 1 - Pyruvate2acetate-formate