GCA_020539105.1 - 2 region(s)

Identified primary metabolite regions

JAJBPT010000010 (original name was: JAJBPT010000010.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	Others_HGD_unassigned	Putative	1	22,321

JAJBPT010000030 (original name was: JAJBPT010000030.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 24.1	Pyruvate2acetate-formate	SCFA	1	20,062	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 2.1	Others_HGD_unassigned	Putative	1	22,321
Region 24.1	Pyruvate2acetate-formate	SCFA	1	20,062	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: JAJBPT010000001 (original name was: JAJBPT010000001.1); JAJBPT010000011 (original name was: JAJBPT010000011.1); JAJBPT010000012 (original name was: JAJBPT010000012.1); JAJBPT010000013 (original name was: JAJBPT010000013.1); JAJBPT010000014 (original name was: JAJBPT010000014.1); JAJBPT010000015 (original name was: JAJBPT010000015.1); JAJBPT010000016 (original name was: JAJBPT010000016.1); JAJBPT010000017 (original name was: JAJBPT010000017.1); JAJBPT010000018 (original name was: JAJBPT010000018.1); JAJBPT010000019 (original name was: JAJBPT010000019.1); JAJBPT010000002 (original name was: JAJBPT010000002.1); JAJBPT010000020 (original name was: JAJBPT010000020.1); JAJBPT010000021 (original name was: JAJBPT010000021.1); JAJBPT010000022 (original name was: JAJBPT010000022.1); JAJBPT010000023 (original name was: JAJBPT010000023.1); JAJBPT010000024 (original name was: JAJBPT010000024.1); JAJBPT010000025 (original name was: JAJBPT010000025.1); JAJBPT010000026 (original name was: JAJBPT010000026.1); JAJBPT010000027 (original name was: JAJBPT010000027.1); JAJBPT010000028 (original name was: JAJBPT010000028.1); JAJBPT010000029 (original name was: JAJBPT010000029.1); JAJBPT010000003 (original name was: JAJBPT010000003.1); JAJBPT010000031 (original name was: JAJBPT010000031.1); JAJBPT010000032 (original name was: JAJBPT010000032.1); JAJBPT010000033 (original name was: JAJBPT010000033.1); JAJBPT010000034 (original name was: JAJBPT010000034.1); JAJBPT010000035 (original name was: JAJBPT010000035.1); JAJBPT010000036 (original name was: JAJBPT010000036.1); JAJBPT010000037 (original name was: JAJBPT010000037.1); JAJBPT010000038 (original name was: JAJBPT010000038.1); JAJBPT010000004 (original name was: JAJBPT010000004.1); JAJBPT010000039 (original name was: JAJBPT010000039.1); JAJBPT010000040 (original name was: JAJBPT010000040.1); JAJBPT010000041 (original name was: JAJBPT010000041.1); JAJBPT010000042 (original name was: JAJBPT010000042.1); JAJBPT010000043 (original name was: JAJBPT010000043.1); JAJBPT010000044 (original name was: JAJBPT010000044.1); JAJBPT010000005 (original name was: JAJBPT010000005.1); JAJBPT010000006 (original name was: JAJBPT010000006.1); JAJBPT010000007 (original name was: JAJBPT010000007.1); JAJBPT010000008 (original name was: JAJBPT010000008.1); JAJBPT010000009 (original name was: JAJBPT010000009.1)

Compact view

c00002_JAJBPT0.. - Region 1 - Others_HGD_unassigned

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Location: 1 - 22,321 nt. (total: 22,321 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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c00024_JAJBPT0.. - Region 1 - Pyruvate2acetate-formate