GCA_020784275.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAJGTF010000139 (original name was: JAJGTF010000139.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	RiPP-like	2,238	17,918	gassericin T	RiPP	33%

JAJGTF010000147 (original name was: JAJGTF010000147.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	lanthipeptide-class-ii,RiPP-like	1	17,973

JAJGTF010000162 (original name was: JAJGTF010000162.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	RiPP-like	61,949	74,099

JAJGTF010000026 (original name was: JAJGTF010000026.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 49.1	T3PKS	11,564	52,721

No secondary metabolite regions were found in these records:: JAJGTF010000010 (original name was: JAJGTF010000010.1); JAJGTF010000108 (original name was: JAJGTF010000108.1); JAJGTF010000114 (original name was: JAJGTF010000114.1); JAJGTF010000120 (original name was: JAJGTF010000120.1); JAJGTF010000121 (original name was: JAJGTF010000121.1); JAJGTF010000125 (original name was: JAJGTF010000125.1); JAJGTF010000128 (original name was: JAJGTF010000128.1); JAJGTF010000129 (original name was: JAJGTF010000129.1); JAJGTF010000130 (original name was: JAJGTF010000130.1); JAJGTF010000131 (original name was: JAJGTF010000131.1); JAJGTF010000132 (original name was: JAJGTF010000132.1); JAJGTF010000133 (original name was: JAJGTF010000133.1); JAJGTF010000134 (original name was: JAJGTF010000134.1); JAJGTF010000135 (original name was: JAJGTF010000135.1); JAJGTF010000136 (original name was: JAJGTF010000136.1); JAJGTF010000137 (original name was: JAJGTF010000137.1); JAJGTF010000138 (original name was: JAJGTF010000138.1); JAJGTF010000014 (original name was: JAJGTF010000014.1); JAJGTF010000140 (original name was: JAJGTF010000140.1); JAJGTF010000141 (original name was: JAJGTF010000141.1); JAJGTF010000142 (original name was: JAJGTF010000142.1); JAJGTF010000143 (original name was: JAJGTF010000143.1); JAJGTF010000144 (original name was: JAJGTF010000144.1); JAJGTF010000145 (original name was: JAJGTF010000145.1); JAJGTF010000146 (original name was: JAJGTF010000146.1); JAJGTF010000148 (original name was: JAJGTF010000148.1); JAJGTF010000149 (original name was: JAJGTF010000149.1); JAJGTF010000150 (original name was: JAJGTF010000150.1); JAJGTF010000151 (original name was: JAJGTF010000151.1); JAJGTF010000152 (original name was: JAJGTF010000152.1); JAJGTF010000153 (original name was: JAJGTF010000153.1); JAJGTF010000154 (original name was: JAJGTF010000154.1); JAJGTF010000155 (original name was: JAJGTF010000155.1); JAJGTF010000156 (original name was: JAJGTF010000156.1); JAJGTF010000157 (original name was: JAJGTF010000157.1); JAJGTF010000158 (original name was: JAJGTF010000158.1); JAJGTF010000159 (original name was: JAJGTF010000159.1); JAJGTF010000160 (original name was: JAJGTF010000160.1); JAJGTF010000161 (original name was: JAJGTF010000161.1); JAJGTF010000163 (original name was: JAJGTF010000163.1); JAJGTF010000164 (original name was: JAJGTF010000164.1); JAJGTF010000165 (original name was: JAJGTF010000165.1); JAJGTF010000166 (original name was: JAJGTF010000166.1); JAJGTF010000167 (original name was: JAJGTF010000167.1); JAJGTF010000025 (original name was: JAJGTF010000025.1); JAJGTF010000034 (original name was: JAJGTF010000034.1); JAJGTF010000035 (original name was: JAJGTF010000035.1); JAJGTF010000040 (original name was: JAJGTF010000040.1); JAJGTF010000051 (original name was: JAJGTF010000051.1); JAJGTF010000066 (original name was: JAJGTF010000066.1); JAJGTF010000070 (original name was: JAJGTF010000070.1); JAJGTF010000071 (original name was: JAJGTF010000071.1); JAJGTF010000075 (original name was: JAJGTF010000075.1); JAJGTF010000076 (original name was: JAJGTF010000076.1); JAJGTF010000009 (original name was: JAJGTF010000009.1); JAJGTF010000092 (original name was: JAJGTF010000092.1); JAJGTF010000093 (original name was: JAJGTF010000093.1); JAJGTF010000098 (original name was: JAJGTF010000098.1)

Compact view

c00018_JAJGTF0.. - Region 1 - RiPP-like

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Location: 2,238 - 17,918 nt. (total: 15,681 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00027_JAJGTF0.. - Region 1 - RiPP-like,lanthipeptide-class-ii

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Location: 1 - 17,973 nt. (total: 17,973 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg27_12 - Putative Class II

ctg27_10 leader / core peptide: MSNKDLNNIVGG - AFEEMDhaIQQMDhbEIQGLGVDhbQVQDhaDhbPDhbVAIDhaRAGIAADhaRADhaDhaVRCARWVDhaAAAGGAYDhbWKKHH
ctg27_22 leader / core peptide: LATSQQEVALKGS - RERCNLDhaLQAIRVDhaQLDhbKLMCDhbRDhaKLLANANKCYNLK

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

ctg27_10 - Class II

Cleavage pHMM score: -0.90

RODEO score: 0

Monoisotopic mass: 6370.3 Da

Molecular weight: 6374.2 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 6392.2 Da N = 1; 6410.2 Da N = 2; 6428.2 Da N = 3; 6446.2 Da N = 4; 6464.3 Da N = 5; 6482.3 Da N = 6; 6500.3 Da N = 7; 6518.3 Da N = 8; 6536.3 Da N = 9; 6554.4 Da N = 10; 6572.4 Da N = 11

ctg27_22 - Class II

Cleavage pHMM score: -7.10

RODEO score: 0

Monoisotopic mass: 4189.3 Da

Molecular weight: 4192.0 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 4210.0 Da N = 1; 4228.0 Da N = 2

c00042_JAJGTF0.. - Region 1 - RiPP-like

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Location: 61,949 - 74,099 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00049_JAJGTF0.. - Region 1 - T3PKS

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Location: 11,564 - 52,721 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.