GCA_020784465.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAJGTL010000108 (original name was: JAJGTL010000108.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	lanthipeptide-class-ii,RiPP-like	1	19,936

JAJGTL010000095 (original name was: JAJGTL010000095.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	T3PKS	979	22,251

JAJGTL010000098 (original name was: JAJGTL010000098.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	RiPP-like	109,215	121,365

Region	Type	From	To	Similarity
Region 9.1	lanthipeptide-class-ii,RiPP-like	1	19,936
Region 38.1	T3PKS	979	22,251
Region 41.1	RiPP-like	109,215	121,365

No secondary metabolite regions were found in these records:: JAJGTL010000100 (original name was: JAJGTL010000100.1); JAJGTL010000101 (original name was: JAJGTL010000101.1); JAJGTL010000102 (original name was: JAJGTL010000102.1); JAJGTL010000103 (original name was: JAJGTL010000103.1); JAJGTL010000104 (original name was: JAJGTL010000104.1); JAJGTL010000105 (original name was: JAJGTL010000105.1); JAJGTL010000106 (original name was: JAJGTL010000106.1); JAJGTL010000107 (original name was: JAJGTL010000107.1); JAJGTL010000109 (original name was: JAJGTL010000109.1); JAJGTL010000110 (original name was: JAJGTL010000110.1); JAJGTL010000111 (original name was: JAJGTL010000111.1); JAJGTL010000112 (original name was: JAJGTL010000112.1); JAJGTL010000113 (original name was: JAJGTL010000113.1); JAJGTL010000114 (original name was: JAJGTL010000114.1); JAJGTL010000115 (original name was: JAJGTL010000115.1); JAJGTL010000116 (original name was: JAJGTL010000116.1); JAJGTL010000117 (original name was: JAJGTL010000117.1); JAJGTL010000118 (original name was: JAJGTL010000118.1); JAJGTL010000119 (original name was: JAJGTL010000119.1); JAJGTL010000013 (original name was: JAJGTL010000013.1); JAJGTL010000019 (original name was: JAJGTL010000019.1); JAJGTL010000020 (original name was: JAJGTL010000020.1); JAJGTL010000025 (original name was: JAJGTL010000025.1); JAJGTL010000035 (original name was: JAJGTL010000035.1); JAJGTL010000043 (original name was: JAJGTL010000043.1); JAJGTL010000049 (original name was: JAJGTL010000049.1); JAJGTL010000065 (original name was: JAJGTL010000065.1); JAJGTL010000086 (original name was: JAJGTL010000086.1); JAJGTL010000087 (original name was: JAJGTL010000087.1); JAJGTL010000088 (original name was: JAJGTL010000088.1); JAJGTL010000089 (original name was: JAJGTL010000089.1); JAJGTL010000090 (original name was: JAJGTL010000090.1); JAJGTL010000091 (original name was: JAJGTL010000091.1); JAJGTL010000092 (original name was: JAJGTL010000092.1); JAJGTL010000093 (original name was: JAJGTL010000093.1); JAJGTL010000094 (original name was: JAJGTL010000094.1); JAJGTL010000096 (original name was: JAJGTL010000096.1); JAJGTL010000097 (original name was: JAJGTL010000097.1); JAJGTL010000099 (original name was: JAJGTL010000099.1)

Compact view

c00009_JAJGTL0.. - Region 1 - RiPP-like,lanthipeptide-class-ii

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Location: 1 - 19,936 nt. (total: 19,936 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg9_15 - Putative Class II

ctg9_13 leader / core peptide: MSNKDLNNIVGG - AFEEMDhaIQQMDhbEIQGLGVDhbQVQDhaDhbPDhbVAIDhaRAGIAADhaRADhaDhaVRCARWVDhaAAAGGAYDhbWKKHH
allorf_00145_00297 leader / core peptide: LATSQQEVALKGS - RERCNLDhaLQAIRVDhaQLDhbKLMCDhbRDhaKLLANANKCYNLK
allorf_19493_19645 leader / core peptide: LATSQQEVALKGS - RERCNLDhaLQAIRVDhaQLDhbKLMCDhbRDhaKLLANANKCYNLK

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

ctg9_13 - Class II

Cleavage pHMM score: -0.90

RODEO score: 0

Monoisotopic mass: 6370.3 Da

Molecular weight: 6374.2 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 6392.2 Da N = 1; 6410.2 Da N = 2; 6428.2 Da N = 3; 6446.2 Da N = 4; 6464.3 Da N = 5; 6482.3 Da N = 6; 6500.3 Da N = 7; 6518.3 Da N = 8; 6536.3 Da N = 9; 6554.4 Da N = 10; 6572.4 Da N = 11

allorf_00145_00297 - Class II

Cleavage pHMM score: -7.10

RODEO score: 0

Monoisotopic mass: 4189.3 Da

Molecular weight: 4192.0 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 4210.0 Da N = 1; 4228.0 Da N = 2

allorf_19493_19645 - Class II

Cleavage pHMM score: -7.10

RODEO score: 0

Monoisotopic mass: 4189.3 Da

Molecular weight: 4192.0 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 4210.0 Da N = 1; 4228.0 Da N = 2

c00038_JAJGTL0.. - Region 1 - T3PKS

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Location: 979 - 22,251 nt. (total: 21,273 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00041_JAJGTL0.. - Region 1 - RiPP-like

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Location: 109,215 - 121,365 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.