GCA_020785455.1 - 2 region(s) - gutSMASH results

Identified primary metabolite regions

JAJGVN010000117 (original name was: JAJGVN010000117.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 10.1	pdu	SCFA-other	9,539	48,038	Propanediol degradation S. enterica	PDU	66%

JAJGVN010000072 (original name was: JAJGVN010000072.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 154.1	TPP_AA_metabolism	Putative	4,073	20,903

No primary metabolite regions were found in these records:: JAJGVN010000100 (original name was: JAJGVN010000100.1); JAJGVN010000101 (original name was: JAJGVN010000101.1); JAJGVN010000102 (original name was: JAJGVN010000102.1); JAJGVN010000109 (original name was: JAJGVN010000109.1); JAJGVN010000112 (original name was: JAJGVN010000112.1); JAJGVN010000113 (original name was: JAJGVN010000113.1); JAJGVN010000114 (original name was: JAJGVN010000114.1); JAJGVN010000115 (original name was: JAJGVN010000115.1); JAJGVN010000116 (original name was: JAJGVN010000116.1); JAJGVN010000012 (original name was: JAJGVN010000012.1); JAJGVN010000124 (original name was: JAJGVN010000124.1); JAJGVN010000125 (original name was: JAJGVN010000125.1); JAJGVN010000126 (original name was: JAJGVN010000126.1); JAJGVN010000139 (original name was: JAJGVN010000139.1); JAJGVN010000140 (original name was: JAJGVN010000140.1); JAJGVN010000141 (original name was: JAJGVN010000141.1); JAJGVN010000144 (original name was: JAJGVN010000144.1); JAJGVN010000146 (original name was: JAJGVN010000146.1); JAJGVN010000147 (original name was: JAJGVN010000147.1); JAJGVN010000148 (original name was: JAJGVN010000148.1); JAJGVN010000015 (original name was: JAJGVN010000015.1); JAJGVN010000153 (original name was: JAJGVN010000153.1); JAJGVN010000157 (original name was: JAJGVN010000157.1); JAJGVN010000158 (original name was: JAJGVN010000158.1); JAJGVN010000159 (original name was: JAJGVN010000159.1); JAJGVN010000016 (original name was: JAJGVN010000016.1); JAJGVN010000162 (original name was: JAJGVN010000162.1); JAJGVN010000166 (original name was: JAJGVN010000166.1); JAJGVN010000167 (original name was: JAJGVN010000167.1); JAJGVN010000168 (original name was: JAJGVN010000168.1); JAJGVN010000169 (original name was: JAJGVN010000169.1); JAJGVN010000170 (original name was: JAJGVN010000170.1); JAJGVN010000174 (original name was: JAJGVN010000174.1); JAJGVN010000182 (original name was: JAJGVN010000182.1); JAJGVN010000183 (original name was: JAJGVN010000183.1); JAJGVN010000188 (original name was: JAJGVN010000188.1); JAJGVN010000193 (original name was: JAJGVN010000193.1); JAJGVN010000196 (original name was: JAJGVN010000196.1); JAJGVN010000197 (original name was: JAJGVN010000197.1); JAJGVN010000198 (original name was: JAJGVN010000198.1); JAJGVN010000199 (original name was: JAJGVN010000199.1); JAJGVN010000002 (original name was: JAJGVN010000002.1); JAJGVN010000020 (original name was: JAJGVN010000020.1); JAJGVN010000200 (original name was: JAJGVN010000200.1); JAJGVN010000201 (original name was: JAJGVN010000201.1); JAJGVN010000202 (original name was: JAJGVN010000202.1); JAJGVN010000208 (original name was: JAJGVN010000208.1); JAJGVN010000021 (original name was: JAJGVN010000021.1); JAJGVN010000212 (original name was: JAJGVN010000212.1); JAJGVN010000213 (original name was: JAJGVN010000213.1); JAJGVN010000214 (original name was: JAJGVN010000214.1); JAJGVN010000215 (original name was: JAJGVN010000215.1); JAJGVN010000219 (original name was: JAJGVN010000219.1); JAJGVN010000223 (original name was: JAJGVN010000223.1); JAJGVN010000224 (original name was: JAJGVN010000224.1); JAJGVN010000225 (original name was: JAJGVN010000225.1); JAJGVN010000023 (original name was: JAJGVN010000023.1); JAJGVN010000231 (original name was: JAJGVN010000231.1); JAJGVN010000233 (original name was: JAJGVN010000233.1); JAJGVN010000235 (original name was: JAJGVN010000235.1); JAJGVN010000236 (original name was: JAJGVN010000236.1); JAJGVN010000237 (original name was: JAJGVN010000237.1); JAJGVN010000238 (original name was: JAJGVN010000238.1); JAJGVN010000239 (original name was: JAJGVN010000239.1); JAJGVN010000240 (original name was: JAJGVN010000240.1); JAJGVN010000241 (original name was: JAJGVN010000241.1); JAJGVN010000242 (original name was: JAJGVN010000242.1); JAJGVN010000243 (original name was: JAJGVN010000243.1); JAJGVN010000244 (original name was: JAJGVN010000244.1); JAJGVN010000245 (original name was: JAJGVN010000245.1); JAJGVN010000246 (original name was: JAJGVN010000246.1); JAJGVN010000247 (original name was: JAJGVN010000247.1); JAJGVN010000248 (original name was: JAJGVN010000248.1); JAJGVN010000249 (original name was: JAJGVN010000249.1); JAJGVN010000025 (original name was: JAJGVN010000025.1); JAJGVN010000250 (original name was: JAJGVN010000250.1); JAJGVN010000251 (original name was: JAJGVN010000251.1); JAJGVN010000252 (original name was: JAJGVN010000252.1); JAJGVN010000253 (original name was: JAJGVN010000253.1); JAJGVN010000254 (original name was: JAJGVN010000254.1); JAJGVN010000255 (original name was: JAJGVN010000255.1); JAJGVN010000256 (original name was: JAJGVN010000256.1); JAJGVN010000257 (original name was: JAJGVN010000257.1); JAJGVN010000258 (original name was: JAJGVN010000258.1); JAJGVN010000259 (original name was: JAJGVN010000259.1); JAJGVN010000026 (original name was: JAJGVN010000026.1); JAJGVN010000260 (original name was: JAJGVN010000260.1); JAJGVN010000261 (original name was: JAJGVN010000261.1); JAJGVN010000262 (original name was: JAJGVN010000262.1); JAJGVN010000263 (original name was: JAJGVN010000263.1); JAJGVN010000264 (original name was: JAJGVN010000264.1); JAJGVN010000265 (original name was: JAJGVN010000265.1); JAJGVN010000266 (original name was: JAJGVN010000266.1); JAJGVN010000267 (original name was: JAJGVN010000267.1); JAJGVN010000268 (original name was: JAJGVN010000268.1); JAJGVN010000269 (original name was: JAJGVN010000269.1); JAJGVN010000027 (original name was: JAJGVN010000027.1); JAJGVN010000270 (original name was: JAJGVN010000270.1); JAJGVN010000271 (original name was: JAJGVN010000271.1); JAJGVN010000272 (original name was: JAJGVN010000272.1); JAJGVN010000273 (original name was: JAJGVN010000273.1); JAJGVN010000274 (original name was: JAJGVN010000274.1); JAJGVN010000275 (original name was: JAJGVN010000275.1); JAJGVN010000276 (original name was: JAJGVN010000276.1); JAJGVN010000277 (original name was: JAJGVN010000277.1); JAJGVN010000278 (original name was: JAJGVN010000278.1); JAJGVN010000279 (original name was: JAJGVN010000279.1); JAJGVN010000028 (original name was: JAJGVN010000028.1); JAJGVN010000280 (original name was: JAJGVN010000280.1); JAJGVN010000281 (original name was: JAJGVN010000281.1); JAJGVN010000282 (original name was: JAJGVN010000282.1); JAJGVN010000283 (original name was: JAJGVN010000283.1); JAJGVN010000284 (original name was: JAJGVN010000284.1); JAJGVN010000285 (original name was: JAJGVN010000285.1); JAJGVN010000286 (original name was: JAJGVN010000286.1); JAJGVN010000287 (original name was: JAJGVN010000287.1); JAJGVN010000288 (original name was: JAJGVN010000288.1); JAJGVN010000289 (original name was: JAJGVN010000289.1); JAJGVN010000029 (original name was: JAJGVN010000029.1); JAJGVN010000290 (original name was: JAJGVN010000290.1); JAJGVN010000291 (original name was: JAJGVN010000291.1); JAJGVN010000292 (original name was: JAJGVN010000292.1); JAJGVN010000293 (original name was: JAJGVN010000293.1); JAJGVN010000294 (original name was: JAJGVN010000294.1); JAJGVN010000295 (original name was: JAJGVN010000295.1); JAJGVN010000296 (original name was: JAJGVN010000296.1); JAJGVN010000297 (original name was: JAJGVN010000297.1); JAJGVN010000298 (original name was: JAJGVN010000298.1); JAJGVN010000299 (original name was: JAJGVN010000299.1); JAJGVN010000003 (original name was: JAJGVN010000003.1); JAJGVN010000030 (original name was: JAJGVN010000030.1); JAJGVN010000300 (original name was: JAJGVN010000300.1); JAJGVN010000301 (original name was: JAJGVN010000301.1); JAJGVN010000302 (original name was: JAJGVN010000302.1); JAJGVN010000303 (original name was: JAJGVN010000303.1); JAJGVN010000304 (original name was: JAJGVN010000304.1); JAJGVN010000039 (original name was: JAJGVN010000039.1); JAJGVN010000004 (original name was: JAJGVN010000004.1); JAJGVN010000043 (original name was: JAJGVN010000043.1); JAJGVN010000044 (original name was: JAJGVN010000044.1); JAJGVN010000045 (original name was: JAJGVN010000045.1); JAJGVN010000046 (original name was: JAJGVN010000046.1); JAJGVN010000047 (original name was: JAJGVN010000047.1); JAJGVN010000005 (original name was: JAJGVN010000005.1); JAJGVN010000052 (original name was: JAJGVN010000052.1); JAJGVN010000053 (original name was: JAJGVN010000053.1); JAJGVN010000054 (original name was: JAJGVN010000054.1); JAJGVN010000055 (original name was: JAJGVN010000055.1); JAJGVN010000056 (original name was: JAJGVN010000056.1); JAJGVN010000069 (original name was: JAJGVN010000069.1); JAJGVN010000070 (original name was: JAJGVN010000070.1); JAJGVN010000071 (original name was: JAJGVN010000071.1); JAJGVN010000079 (original name was: JAJGVN010000079.1); JAJGVN010000080 (original name was: JAJGVN010000080.1); JAJGVN010000081 (original name was: JAJGVN010000081.1); JAJGVN010000082 (original name was: JAJGVN010000082.1); JAJGVN010000083 (original name was: JAJGVN010000083.1); JAJGVN010000084 (original name was: JAJGVN010000084.1); JAJGVN010000085 (original name was: JAJGVN010000085.1); JAJGVN010000086 (original name was: JAJGVN010000086.1); JAJGVN010000009 (original name was: JAJGVN010000009.1)

Compact view

c00010_JAJGVN0.. - Region 1 - pdu

Download region GenBank file

Location: 9,539 - 48,038 nt. (total: 38,500 nt) Show pHMM detection rules used

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00154_JAJGVN0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 4,073 - 20,903 nt. (total: 16,831 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.