GCA_020785635.1 - 2 region(s) - gutSMASH results

Identified primary metabolite regions

JAJGVV010000115 (original name was: JAJGVV010000115.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 10.1	pdu	SCFA-other	1	31,503	Propanediol degradation S. enterica	PDU	62%

JAJGVV010000145 (original name was: JAJGVV010000145.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 41.1	TPP_AA_metabolism	Putative	10,730	47,673

No primary metabolite regions were found in these records:: JAJGVV010000010 (original name was: JAJGVV010000010.1); JAJGVV010000102 (original name was: JAJGVV010000102.1); JAJGVV010000103 (original name was: JAJGVV010000103.1); JAJGVV010000109 (original name was: JAJGVV010000109.1); JAJGVV010000110 (original name was: JAJGVV010000110.1); JAJGVV010000111 (original name was: JAJGVV010000111.1); JAJGVV010000112 (original name was: JAJGVV010000112.1); JAJGVV010000113 (original name was: JAJGVV010000113.1); JAJGVV010000114 (original name was: JAJGVV010000114.1); JAJGVV010000116 (original name was: JAJGVV010000116.1); JAJGVV010000117 (original name was: JAJGVV010000117.1); JAJGVV010000118 (original name was: JAJGVV010000118.1); JAJGVV010000119 (original name was: JAJGVV010000119.1); JAJGVV010000120 (original name was: JAJGVV010000120.1); JAJGVV010000121 (original name was: JAJGVV010000121.1); JAJGVV010000122 (original name was: JAJGVV010000122.1); JAJGVV010000123 (original name was: JAJGVV010000123.1); JAJGVV010000124 (original name was: JAJGVV010000124.1); JAJGVV010000125 (original name was: JAJGVV010000125.1); JAJGVV010000126 (original name was: JAJGVV010000126.1); JAJGVV010000127 (original name was: JAJGVV010000127.1); JAJGVV010000128 (original name was: JAJGVV010000128.1); JAJGVV010000129 (original name was: JAJGVV010000129.1); JAJGVV010000130 (original name was: JAJGVV010000130.1); JAJGVV010000131 (original name was: JAJGVV010000131.1); JAJGVV010000132 (original name was: JAJGVV010000132.1); JAJGVV010000133 (original name was: JAJGVV010000133.1); JAJGVV010000134 (original name was: JAJGVV010000134.1); JAJGVV010000135 (original name was: JAJGVV010000135.1); JAJGVV010000136 (original name was: JAJGVV010000136.1); JAJGVV010000137 (original name was: JAJGVV010000137.1); JAJGVV010000138 (original name was: JAJGVV010000138.1); JAJGVV010000139 (original name was: JAJGVV010000139.1); JAJGVV010000014 (original name was: JAJGVV010000014.1); JAJGVV010000140 (original name was: JAJGVV010000140.1); JAJGVV010000141 (original name was: JAJGVV010000141.1); JAJGVV010000142 (original name was: JAJGVV010000142.1); JAJGVV010000143 (original name was: JAJGVV010000143.1); JAJGVV010000144 (original name was: JAJGVV010000144.1); JAJGVV010000146 (original name was: JAJGVV010000146.1); JAJGVV010000147 (original name was: JAJGVV010000147.1); JAJGVV010000148 (original name was: JAJGVV010000148.1); JAJGVV010000149 (original name was: JAJGVV010000149.1); JAJGVV010000015 (original name was: JAJGVV010000015.1); JAJGVV010000150 (original name was: JAJGVV010000150.1); JAJGVV010000151 (original name was: JAJGVV010000151.1); JAJGVV010000152 (original name was: JAJGVV010000152.1); JAJGVV010000153 (original name was: JAJGVV010000153.1); JAJGVV010000154 (original name was: JAJGVV010000154.1); JAJGVV010000155 (original name was: JAJGVV010000155.1); JAJGVV010000156 (original name was: JAJGVV010000156.1); JAJGVV010000157 (original name was: JAJGVV010000157.1); JAJGVV010000158 (original name was: JAJGVV010000158.1); JAJGVV010000159 (original name was: JAJGVV010000159.1); JAJGVV010000160 (original name was: JAJGVV010000160.1); JAJGVV010000161 (original name was: JAJGVV010000161.1); JAJGVV010000162 (original name was: JAJGVV010000162.1); JAJGVV010000163 (original name was: JAJGVV010000163.1); JAJGVV010000164 (original name was: JAJGVV010000164.1); JAJGVV010000165 (original name was: JAJGVV010000165.1); JAJGVV010000166 (original name was: JAJGVV010000166.1); JAJGVV010000167 (original name was: JAJGVV010000167.1); JAJGVV010000168 (original name was: JAJGVV010000168.1); JAJGVV010000169 (original name was: JAJGVV010000169.1); JAJGVV010000170 (original name was: JAJGVV010000170.1); JAJGVV010000171 (original name was: JAJGVV010000171.1); JAJGVV010000172 (original name was: JAJGVV010000172.1); JAJGVV010000173 (original name was: JAJGVV010000173.1); JAJGVV010000174 (original name was: JAJGVV010000174.1); JAJGVV010000175 (original name was: JAJGVV010000175.1); JAJGVV010000176 (original name was: JAJGVV010000176.1); JAJGVV010000177 (original name was: JAJGVV010000177.1); JAJGVV010000178 (original name was: JAJGVV010000178.1); JAJGVV010000179 (original name was: JAJGVV010000179.1); JAJGVV010000180 (original name was: JAJGVV010000180.1); JAJGVV010000181 (original name was: JAJGVV010000181.1); JAJGVV010000182 (original name was: JAJGVV010000182.1); JAJGVV010000183 (original name was: JAJGVV010000183.1); JAJGVV010000184 (original name was: JAJGVV010000184.1); JAJGVV010000185 (original name was: JAJGVV010000185.1); JAJGVV010000186 (original name was: JAJGVV010000186.1); JAJGVV010000187 (original name was: JAJGVV010000187.1); JAJGVV010000188 (original name was: JAJGVV010000188.1); JAJGVV010000189 (original name was: JAJGVV010000189.1); JAJGVV010000190 (original name was: JAJGVV010000190.1); JAJGVV010000191 (original name was: JAJGVV010000191.1); JAJGVV010000192 (original name was: JAJGVV010000192.1); JAJGVV010000193 (original name was: JAJGVV010000193.1); JAJGVV010000194 (original name was: JAJGVV010000194.1); JAJGVV010000195 (original name was: JAJGVV010000195.1); JAJGVV010000196 (original name was: JAJGVV010000196.1); JAJGVV010000197 (original name was: JAJGVV010000197.1); JAJGVV010000198 (original name was: JAJGVV010000198.1); JAJGVV010000199 (original name was: JAJGVV010000199.1); JAJGVV010000200 (original name was: JAJGVV010000200.1); JAJGVV010000201 (original name was: JAJGVV010000201.1); JAJGVV010000202 (original name was: JAJGVV010000202.1); JAJGVV010000203 (original name was: JAJGVV010000203.1); JAJGVV010000204 (original name was: JAJGVV010000204.1); JAJGVV010000205 (original name was: JAJGVV010000205.1); JAJGVV010000206 (original name was: JAJGVV010000206.1); JAJGVV010000207 (original name was: JAJGVV010000207.1); JAJGVV010000208 (original name was: JAJGVV010000208.1); JAJGVV010000209 (original name was: JAJGVV010000209.1); JAJGVV010000021 (original name was: JAJGVV010000021.1); JAJGVV010000210 (original name was: JAJGVV010000210.1); JAJGVV010000211 (original name was: JAJGVV010000211.1); JAJGVV010000212 (original name was: JAJGVV010000212.1); JAJGVV010000213 (original name was: JAJGVV010000213.1); JAJGVV010000214 (original name was: JAJGVV010000214.1); JAJGVV010000032 (original name was: JAJGVV010000032.1); JAJGVV010000033 (original name was: JAJGVV010000033.1); JAJGVV010000034 (original name was: JAJGVV010000034.1); JAJGVV010000035 (original name was: JAJGVV010000035.1); JAJGVV010000036 (original name was: JAJGVV010000036.1); JAJGVV010000043 (original name was: JAJGVV010000043.1); JAJGVV010000044 (original name was: JAJGVV010000044.1); JAJGVV010000045 (original name was: JAJGVV010000045.1); JAJGVV010000046 (original name was: JAJGVV010000046.1); JAJGVV010000047 (original name was: JAJGVV010000047.1); JAJGVV010000054 (original name was: JAJGVV010000054.1); JAJGVV010000055 (original name was: JAJGVV010000055.1); JAJGVV010000056 (original name was: JAJGVV010000056.1); JAJGVV010000006 (original name was: JAJGVV010000006.1); JAJGVV010000066 (original name was: JAJGVV010000066.1); JAJGVV010000068 (original name was: JAJGVV010000068.1); JAJGVV010000007 (original name was: JAJGVV010000007.1); JAJGVV010000070 (original name was: JAJGVV010000070.1); JAJGVV010000071 (original name was: JAJGVV010000071.1); JAJGVV010000072 (original name was: JAJGVV010000072.1); JAJGVV010000076 (original name was: JAJGVV010000076.1); JAJGVV010000077 (original name was: JAJGVV010000077.1); JAJGVV010000008 (original name was: JAJGVV010000008.1); JAJGVV010000082 (original name was: JAJGVV010000082.1); JAJGVV010000009 (original name was: JAJGVV010000009.1); JAJGVV010000090 (original name was: JAJGVV010000090.1); JAJGVV010000097 (original name was: JAJGVV010000097.1); JAJGVV010000098 (original name was: JAJGVV010000098.1); JAJGVV010000099 (original name was: JAJGVV010000099.1)

Compact view

c00010_JAJGVV0.. - Region 1 - pdu

Download region GenBank file

Location: 1 - 31,503 nt. (total: 31,503 nt) Show pHMM detection rules used

Region on contig edge.

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00041_JAJGVV0.. - Region 1 - TPP_AA_metabolism

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Location: 10,730 - 47,673 nt. (total: 36,944 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.