GCA_020785655.1 - 2 region(s)

Identified primary metabolite regions

JAJGVW010000114 (original name was: JAJGVW010000114.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 8.1	Nitrate_reductase	E-MGC	5,947	27,456	Nitrate reductase E. coli	NIR	40%

JAJGVW010000024 (original name was: JAJGVW010000024.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 75.1	TPP_AA_metabolism	Putative	5,303	39,338

No primary metabolite regions were found in these records:: JAJGVW010000010 (original name was: JAJGVW010000010.1); JAJGVW010000105 (original name was: JAJGVW010000105.1); JAJGVW010000106 (original name was: JAJGVW010000106.1); JAJGVW010000011 (original name was: JAJGVW010000011.1); JAJGVW010000111 (original name was: JAJGVW010000111.1); JAJGVW010000112 (original name was: JAJGVW010000112.1); JAJGVW010000113 (original name was: JAJGVW010000113.1); JAJGVW010000115 (original name was: JAJGVW010000115.1); JAJGVW010000117 (original name was: JAJGVW010000117.1); JAJGVW010000118 (original name was: JAJGVW010000118.1); JAJGVW010000119 (original name was: JAJGVW010000119.1); JAJGVW010000120 (original name was: JAJGVW010000120.1); JAJGVW010000121 (original name was: JAJGVW010000121.1); JAJGVW010000122 (original name was: JAJGVW010000122.1); JAJGVW010000123 (original name was: JAJGVW010000123.1); JAJGVW010000124 (original name was: JAJGVW010000124.1); JAJGVW010000125 (original name was: JAJGVW010000125.1); JAJGVW010000126 (original name was: JAJGVW010000126.1); JAJGVW010000127 (original name was: JAJGVW010000127.1); JAJGVW010000128 (original name was: JAJGVW010000128.1); JAJGVW010000129 (original name was: JAJGVW010000129.1); JAJGVW010000130 (original name was: JAJGVW010000130.1); JAJGVW010000131 (original name was: JAJGVW010000131.1); JAJGVW010000132 (original name was: JAJGVW010000132.1); JAJGVW010000133 (original name was: JAJGVW010000133.1); JAJGVW010000134 (original name was: JAJGVW010000134.1); JAJGVW010000135 (original name was: JAJGVW010000135.1); JAJGVW010000136 (original name was: JAJGVW010000136.1); JAJGVW010000137 (original name was: JAJGVW010000137.1); JAJGVW010000138 (original name was: JAJGVW010000138.1); JAJGVW010000139 (original name was: JAJGVW010000139.1); JAJGVW010000140 (original name was: JAJGVW010000140.1); JAJGVW010000141 (original name was: JAJGVW010000141.1); JAJGVW010000142 (original name was: JAJGVW010000142.1); JAJGVW010000143 (original name was: JAJGVW010000143.1); JAJGVW010000144 (original name was: JAJGVW010000144.1); JAJGVW010000145 (original name was: JAJGVW010000145.1); JAJGVW010000146 (original name was: JAJGVW010000146.1); JAJGVW010000147 (original name was: JAJGVW010000147.1); JAJGVW010000148 (original name was: JAJGVW010000148.1); JAJGVW010000149 (original name was: JAJGVW010000149.1); JAJGVW010000150 (original name was: JAJGVW010000150.1); JAJGVW010000151 (original name was: JAJGVW010000151.1); JAJGVW010000152 (original name was: JAJGVW010000152.1); JAJGVW010000153 (original name was: JAJGVW010000153.1); JAJGVW010000154 (original name was: JAJGVW010000154.1); JAJGVW010000155 (original name was: JAJGVW010000155.1); JAJGVW010000156 (original name was: JAJGVW010000156.1); JAJGVW010000157 (original name was: JAJGVW010000157.1); JAJGVW010000158 (original name was: JAJGVW010000158.1); JAJGVW010000159 (original name was: JAJGVW010000159.1); JAJGVW010000016 (original name was: JAJGVW010000016.1); JAJGVW010000160 (original name was: JAJGVW010000160.1); JAJGVW010000161 (original name was: JAJGVW010000161.1); JAJGVW010000162 (original name was: JAJGVW010000162.1); JAJGVW010000163 (original name was: JAJGVW010000163.1); JAJGVW010000164 (original name was: JAJGVW010000164.1); JAJGVW010000165 (original name was: JAJGVW010000165.1); JAJGVW010000166 (original name was: JAJGVW010000166.1); JAJGVW010000167 (original name was: JAJGVW010000167.1); JAJGVW010000168 (original name was: JAJGVW010000168.1); JAJGVW010000169 (original name was: JAJGVW010000169.1); JAJGVW010000170 (original name was: JAJGVW010000170.1); JAJGVW010000171 (original name was: JAJGVW010000171.1); JAJGVW010000172 (original name was: JAJGVW010000172.1); JAJGVW010000173 (original name was: JAJGVW010000173.1); JAJGVW010000174 (original name was: JAJGVW010000174.1); JAJGVW010000175 (original name was: JAJGVW010000175.1); JAJGVW010000176 (original name was: JAJGVW010000176.1); JAJGVW010000177 (original name was: JAJGVW010000177.1); JAJGVW010000178 (original name was: JAJGVW010000178.1); JAJGVW010000018 (original name was: JAJGVW010000018.1); JAJGVW010000023 (original name was: JAJGVW010000023.1); JAJGVW010000032 (original name was: JAJGVW010000032.1); JAJGVW010000037 (original name was: JAJGVW010000037.1); JAJGVW010000038 (original name was: JAJGVW010000038.1); JAJGVW010000039 (original name was: JAJGVW010000039.1); JAJGVW010000040 (original name was: JAJGVW010000040.1); JAJGVW010000041 (original name was: JAJGVW010000041.1); JAJGVW010000050 (original name was: JAJGVW010000050.1); JAJGVW010000058 (original name was: JAJGVW010000058.1); JAJGVW010000059 (original name was: JAJGVW010000059.1); JAJGVW010000060 (original name was: JAJGVW010000060.1); JAJGVW010000067 (original name was: JAJGVW010000067.1); JAJGVW010000076 (original name was: JAJGVW010000076.1); JAJGVW010000083 (original name was: JAJGVW010000083.1); JAJGVW010000084 (original name was: JAJGVW010000084.1); JAJGVW010000009 (original name was: JAJGVW010000009.1)

Compact view

c00008_JAJGVW0.. - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 5,947 - 27,456 nt. (total: 21,510 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00075_JAJGVW0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 5,303 - 39,338 nt. (total: 34,036 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.