GCA_020785735.1 - 2 region(s) - gutSMASH results

Identified primary metabolite regions

JAJGVU010000194 (original name was: JAJGVU010000194.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 31.1	TPP_AA_metabolism	Putative	10,752	47,695

JAJGVU010000265 (original name was: JAJGVU010000265.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 104.1	pdu	SCFA-other	40,755	72,257	Propanediol degradation S. enterica	PDU	62%

No primary metabolite regions were found in these records:: JAJGVU010000010 (original name was: JAJGVU010000010.1); JAJGVU010000105 (original name was: JAJGVU010000105.1); JAJGVU010000106 (original name was: JAJGVU010000106.1); JAJGVU010000107 (original name was: JAJGVU010000107.1); JAJGVU010000108 (original name was: JAJGVU010000108.1); JAJGVU010000011 (original name was: JAJGVU010000011.1); JAJGVU010000117 (original name was: JAJGVU010000117.1); JAJGVU010000118 (original name was: JAJGVU010000118.1); JAJGVU010000119 (original name was: JAJGVU010000119.1); JAJGVU010000131 (original name was: JAJGVU010000131.1); JAJGVU010000143 (original name was: JAJGVU010000143.1); JAJGVU010000150 (original name was: JAJGVU010000150.1); JAJGVU010000151 (original name was: JAJGVU010000151.1); JAJGVU010000152 (original name was: JAJGVU010000152.1); JAJGVU010000153 (original name was: JAJGVU010000153.1); JAJGVU010000160 (original name was: JAJGVU010000160.1); JAJGVU010000168 (original name was: JAJGVU010000168.1); JAJGVU010000169 (original name was: JAJGVU010000169.1); JAJGVU010000170 (original name was: JAJGVU010000170.1); JAJGVU010000182 (original name was: JAJGVU010000182.1); JAJGVU010000183 (original name was: JAJGVU010000183.1); JAJGVU010000184 (original name was: JAJGVU010000184.1); JAJGVU010000187 (original name was: JAJGVU010000187.1); JAJGVU010000188 (original name was: JAJGVU010000188.1); JAJGVU010000189 (original name was: JAJGVU010000189.1); JAJGVU010000019 (original name was: JAJGVU010000019.1); JAJGVU010000190 (original name was: JAJGVU010000190.1); JAJGVU010000191 (original name was: JAJGVU010000191.1); JAJGVU010000192 (original name was: JAJGVU010000192.1); JAJGVU010000193 (original name was: JAJGVU010000193.1); JAJGVU010000195 (original name was: JAJGVU010000195.1); JAJGVU010000196 (original name was: JAJGVU010000196.1); JAJGVU010000197 (original name was: JAJGVU010000197.1); JAJGVU010000198 (original name was: JAJGVU010000198.1); JAJGVU010000199 (original name was: JAJGVU010000199.1); JAJGVU010000020 (original name was: JAJGVU010000020.1); JAJGVU010000200 (original name was: JAJGVU010000200.1); JAJGVU010000201 (original name was: JAJGVU010000201.1); JAJGVU010000202 (original name was: JAJGVU010000202.1); JAJGVU010000203 (original name was: JAJGVU010000203.1); JAJGVU010000204 (original name was: JAJGVU010000204.1); JAJGVU010000205 (original name was: JAJGVU010000205.1); JAJGVU010000206 (original name was: JAJGVU010000206.1); JAJGVU010000207 (original name was: JAJGVU010000207.1); JAJGVU010000208 (original name was: JAJGVU010000208.1); JAJGVU010000209 (original name was: JAJGVU010000209.1); JAJGVU010000210 (original name was: JAJGVU010000210.1); JAJGVU010000211 (original name was: JAJGVU010000211.1); JAJGVU010000212 (original name was: JAJGVU010000212.1); JAJGVU010000213 (original name was: JAJGVU010000213.1); JAJGVU010000214 (original name was: JAJGVU010000214.1); JAJGVU010000215 (original name was: JAJGVU010000215.1); JAJGVU010000216 (original name was: JAJGVU010000216.1); JAJGVU010000217 (original name was: JAJGVU010000217.1); JAJGVU010000218 (original name was: JAJGVU010000218.1); JAJGVU010000219 (original name was: JAJGVU010000219.1); JAJGVU010000022 (original name was: JAJGVU010000022.1); JAJGVU010000220 (original name was: JAJGVU010000220.1); JAJGVU010000221 (original name was: JAJGVU010000221.1); JAJGVU010000222 (original name was: JAJGVU010000222.1); JAJGVU010000223 (original name was: JAJGVU010000223.1); JAJGVU010000224 (original name was: JAJGVU010000224.1); JAJGVU010000225 (original name was: JAJGVU010000225.1); JAJGVU010000226 (original name was: JAJGVU010000226.1); JAJGVU010000227 (original name was: JAJGVU010000227.1); JAJGVU010000228 (original name was: JAJGVU010000228.1); JAJGVU010000229 (original name was: JAJGVU010000229.1); JAJGVU010000230 (original name was: JAJGVU010000230.1); JAJGVU010000231 (original name was: JAJGVU010000231.1); JAJGVU010000232 (original name was: JAJGVU010000232.1); JAJGVU010000233 (original name was: JAJGVU010000233.1); JAJGVU010000234 (original name was: JAJGVU010000234.1); JAJGVU010000235 (original name was: JAJGVU010000235.1); JAJGVU010000236 (original name was: JAJGVU010000236.1); JAJGVU010000237 (original name was: JAJGVU010000237.1); JAJGVU010000238 (original name was: JAJGVU010000238.1); JAJGVU010000239 (original name was: JAJGVU010000239.1); JAJGVU010000240 (original name was: JAJGVU010000240.1); JAJGVU010000241 (original name was: JAJGVU010000241.1); JAJGVU010000242 (original name was: JAJGVU010000242.1); JAJGVU010000243 (original name was: JAJGVU010000243.1); JAJGVU010000244 (original name was: JAJGVU010000244.1); JAJGVU010000245 (original name was: JAJGVU010000245.1); JAJGVU010000246 (original name was: JAJGVU010000246.1); JAJGVU010000247 (original name was: JAJGVU010000247.1); JAJGVU010000248 (original name was: JAJGVU010000248.1); JAJGVU010000249 (original name was: JAJGVU010000249.1); JAJGVU010000250 (original name was: JAJGVU010000250.1); JAJGVU010000251 (original name was: JAJGVU010000251.1); JAJGVU010000252 (original name was: JAJGVU010000252.1); JAJGVU010000253 (original name was: JAJGVU010000253.1); JAJGVU010000254 (original name was: JAJGVU010000254.1); JAJGVU010000255 (original name was: JAJGVU010000255.1); JAJGVU010000256 (original name was: JAJGVU010000256.1); JAJGVU010000257 (original name was: JAJGVU010000257.1); JAJGVU010000258 (original name was: JAJGVU010000258.1); JAJGVU010000259 (original name was: JAJGVU010000259.1); JAJGVU010000260 (original name was: JAJGVU010000260.1); JAJGVU010000261 (original name was: JAJGVU010000261.1); JAJGVU010000262 (original name was: JAJGVU010000262.1); JAJGVU010000263 (original name was: JAJGVU010000263.1); JAJGVU010000264 (original name was: JAJGVU010000264.1); JAJGVU010000266 (original name was: JAJGVU010000266.1); JAJGVU010000267 (original name was: JAJGVU010000267.1); JAJGVU010000268 (original name was: JAJGVU010000268.1); JAJGVU010000269 (original name was: JAJGVU010000269.1); JAJGVU010000270 (original name was: JAJGVU010000270.1); JAJGVU010000271 (original name was: JAJGVU010000271.1); JAJGVU010000272 (original name was: JAJGVU010000272.1); JAJGVU010000273 (original name was: JAJGVU010000273.1); JAJGVU010000274 (original name was: JAJGVU010000274.1); JAJGVU010000275 (original name was: JAJGVU010000275.1); JAJGVU010000276 (original name was: JAJGVU010000276.1); JAJGVU010000277 (original name was: JAJGVU010000277.1); JAJGVU010000278 (original name was: JAJGVU010000278.1); JAJGVU010000279 (original name was: JAJGVU010000279.1); JAJGVU010000280 (original name was: JAJGVU010000280.1); JAJGVU010000281 (original name was: JAJGVU010000281.1); JAJGVU010000282 (original name was: JAJGVU010000282.1); JAJGVU010000034 (original name was: JAJGVU010000034.1); JAJGVU010000035 (original name was: JAJGVU010000035.1); JAJGVU010000036 (original name was: JAJGVU010000036.1); JAJGVU010000047 (original name was: JAJGVU010000047.1); JAJGVU010000048 (original name was: JAJGVU010000048.1); JAJGVU010000049 (original name was: JAJGVU010000049.1); JAJGVU010000062 (original name was: JAJGVU010000062.1); JAJGVU010000068 (original name was: JAJGVU010000068.1); JAJGVU010000069 (original name was: JAJGVU010000069.1); JAJGVU010000007 (original name was: JAJGVU010000007.1); JAJGVU010000070 (original name was: JAJGVU010000070.1); JAJGVU010000008 (original name was: JAJGVU010000008.1); JAJGVU010000081 (original name was: JAJGVU010000081.1); JAJGVU010000088 (original name was: JAJGVU010000088.1); JAJGVU010000089 (original name was: JAJGVU010000089.1); JAJGVU010000009 (original name was: JAJGVU010000009.1); JAJGVU010000096 (original name was: JAJGVU010000096.1); JAJGVU010000097 (original name was: JAJGVU010000097.1)

Compact view

c00031_JAJGVU0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 10,752 - 47,695 nt. (total: 36,944 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00104_JAJGVU0.. - Region 1 - pdu

Download region GenBank file

Location: 40,755 - 72,257 nt. (total: 31,503 nt) Show pHMM detection rules used

Region on contig edge.

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters