GCA_020785855.1 - 2 region(s)

Identified primary metabolite regions

JAJGWG010000085 (original name was: JAJGWG010000085.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 74.1	pdu	SCFA-other	57,439	95,941	Propanediol degradation S. enterica	PDU	66%

JAJGWG010000096 (original name was: JAJGWG010000096.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 77.1	TPP_AA_metabolism	Putative	19,954	57,179

No primary metabolite regions were found in these records:: JAJGWG010000107 (original name was: JAJGWG010000107.1); JAJGWG010000110 (original name was: JAJGWG010000110.1); JAJGWG010000123 (original name was: JAJGWG010000123.1); JAJGWG010000124 (original name was: JAJGWG010000124.1); JAJGWG010000145 (original name was: JAJGWG010000145.1); JAJGWG010000155 (original name was: JAJGWG010000155.1); JAJGWG010000167 (original name was: JAJGWG010000167.1); JAJGWG010000168 (original name was: JAJGWG010000168.1); JAJGWG010000169 (original name was: JAJGWG010000169.1); JAJGWG010000017 (original name was: JAJGWG010000017.1); JAJGWG010000172 (original name was: JAJGWG010000172.1); JAJGWG010000173 (original name was: JAJGWG010000173.1); JAJGWG010000174 (original name was: JAJGWG010000174.1); JAJGWG010000175 (original name was: JAJGWG010000175.1); JAJGWG010000176 (original name was: JAJGWG010000176.1); JAJGWG010000177 (original name was: JAJGWG010000177.1); JAJGWG010000178 (original name was: JAJGWG010000178.1); JAJGWG010000179 (original name was: JAJGWG010000179.1); JAJGWG010000180 (original name was: JAJGWG010000180.1); JAJGWG010000181 (original name was: JAJGWG010000181.1); JAJGWG010000182 (original name was: JAJGWG010000182.1); JAJGWG010000183 (original name was: JAJGWG010000183.1); JAJGWG010000184 (original name was: JAJGWG010000184.1); JAJGWG010000185 (original name was: JAJGWG010000185.1); JAJGWG010000186 (original name was: JAJGWG010000186.1); JAJGWG010000187 (original name was: JAJGWG010000187.1); JAJGWG010000188 (original name was: JAJGWG010000188.1); JAJGWG010000189 (original name was: JAJGWG010000189.1); JAJGWG010000190 (original name was: JAJGWG010000190.1); JAJGWG010000191 (original name was: JAJGWG010000191.1); JAJGWG010000192 (original name was: JAJGWG010000192.1); JAJGWG010000193 (original name was: JAJGWG010000193.1); JAJGWG010000194 (original name was: JAJGWG010000194.1); JAJGWG010000195 (original name was: JAJGWG010000195.1); JAJGWG010000196 (original name was: JAJGWG010000196.1); JAJGWG010000197 (original name was: JAJGWG010000197.1); JAJGWG010000198 (original name was: JAJGWG010000198.1); JAJGWG010000199 (original name was: JAJGWG010000199.1); JAJGWG010000200 (original name was: JAJGWG010000200.1); JAJGWG010000201 (original name was: JAJGWG010000201.1); JAJGWG010000202 (original name was: JAJGWG010000202.1); JAJGWG010000203 (original name was: JAJGWG010000203.1); JAJGWG010000204 (original name was: JAJGWG010000204.1); JAJGWG010000205 (original name was: JAJGWG010000205.1); JAJGWG010000206 (original name was: JAJGWG010000206.1); JAJGWG010000207 (original name was: JAJGWG010000207.1); JAJGWG010000208 (original name was: JAJGWG010000208.1); JAJGWG010000209 (original name was: JAJGWG010000209.1); JAJGWG010000210 (original name was: JAJGWG010000210.1); JAJGWG010000211 (original name was: JAJGWG010000211.1); JAJGWG010000212 (original name was: JAJGWG010000212.1); JAJGWG010000213 (original name was: JAJGWG010000213.1); JAJGWG010000214 (original name was: JAJGWG010000214.1); JAJGWG010000215 (original name was: JAJGWG010000215.1); JAJGWG010000216 (original name was: JAJGWG010000216.1); JAJGWG010000217 (original name was: JAJGWG010000217.1); JAJGWG010000218 (original name was: JAJGWG010000218.1); JAJGWG010000219 (original name was: JAJGWG010000219.1); JAJGWG010000220 (original name was: JAJGWG010000220.1); JAJGWG010000221 (original name was: JAJGWG010000221.1); JAJGWG010000222 (original name was: JAJGWG010000222.1); JAJGWG010000223 (original name was: JAJGWG010000223.1); JAJGWG010000224 (original name was: JAJGWG010000224.1); JAJGWG010000038 (original name was: JAJGWG010000038.1); JAJGWG010000048 (original name was: JAJGWG010000048.1); JAJGWG010000049 (original name was: JAJGWG010000049.1); JAJGWG010000054 (original name was: JAJGWG010000054.1); JAJGWG010000066 (original name was: JAJGWG010000066.1); JAJGWG010000067 (original name was: JAJGWG010000067.1); JAJGWG010000068 (original name was: JAJGWG010000068.1); JAJGWG010000069 (original name was: JAJGWG010000069.1); JAJGWG010000070 (original name was: JAJGWG010000070.1); JAJGWG010000084 (original name was: JAJGWG010000084.1); JAJGWG010000086 (original name was: JAJGWG010000086.1); JAJGWG010000095 (original name was: JAJGWG010000095.1)

Compact view

c00074_JAJGWG0.. - Region 1 - pdu

Download region GenBank file

Location: 57,439 - 95,941 nt. (total: 38,503 nt) Show pHMM detection rules used

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00077_JAJGWG0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 19,954 - 57,179 nt. (total: 37,226 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.