GCA_020785865.1 - 2 region(s)

Identified primary metabolite regions

JAJGWF010000156 (original name was: JAJGWF010000156.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 54.1	TPP_AA_metabolism	Putative	42,978	80,203

JAJGWF010000016 (original name was: JAJGWF010000016.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 57.1	pdu	SCFA-other	57,431	95,933	Propanediol degradation S. enterica	PDU	66%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 54.1	TPP_AA_metabolism	Putative	42,978	80,203
Region 57.1	pdu	SCFA-other	57,431	95,933	Propanediol degradation S. enterica	PDU	66%

No primary metabolite regions were found in these records:: JAJGWF010000104 (original name was: JAJGWF010000104.1); JAJGWF010000105 (original name was: JAJGWF010000105.1); JAJGWF010000106 (original name was: JAJGWF010000106.1); JAJGWF010000107 (original name was: JAJGWF010000107.1); JAJGWF010000108 (original name was: JAJGWF010000108.1); JAJGWF010000109 (original name was: JAJGWF010000109.1); JAJGWF010000110 (original name was: JAJGWF010000110.1); JAJGWF010000111 (original name was: JAJGWF010000111.1); JAJGWF010000112 (original name was: JAJGWF010000112.1); JAJGWF010000113 (original name was: JAJGWF010000113.1); JAJGWF010000114 (original name was: JAJGWF010000114.1); JAJGWF010000115 (original name was: JAJGWF010000115.1); JAJGWF010000116 (original name was: JAJGWF010000116.1); JAJGWF010000117 (original name was: JAJGWF010000117.1); JAJGWF010000118 (original name was: JAJGWF010000118.1); JAJGWF010000119 (original name was: JAJGWF010000119.1); JAJGWF010000120 (original name was: JAJGWF010000120.1); JAJGWF010000121 (original name was: JAJGWF010000121.1); JAJGWF010000122 (original name was: JAJGWF010000122.1); JAJGWF010000123 (original name was: JAJGWF010000123.1); JAJGWF010000124 (original name was: JAJGWF010000124.1); JAJGWF010000125 (original name was: JAJGWF010000125.1); JAJGWF010000126 (original name was: JAJGWF010000126.1); JAJGWF010000127 (original name was: JAJGWF010000127.1); JAJGWF010000128 (original name was: JAJGWF010000128.1); JAJGWF010000129 (original name was: JAJGWF010000129.1); JAJGWF010000130 (original name was: JAJGWF010000130.1); JAJGWF010000131 (original name was: JAJGWF010000131.1); JAJGWF010000132 (original name was: JAJGWF010000132.1); JAJGWF010000133 (original name was: JAJGWF010000133.1); JAJGWF010000134 (original name was: JAJGWF010000134.1); JAJGWF010000135 (original name was: JAJGWF010000135.1); JAJGWF010000136 (original name was: JAJGWF010000136.1); JAJGWF010000137 (original name was: JAJGWF010000137.1); JAJGWF010000138 (original name was: JAJGWF010000138.1); JAJGWF010000139 (original name was: JAJGWF010000139.1); JAJGWF010000140 (original name was: JAJGWF010000140.1); JAJGWF010000141 (original name was: JAJGWF010000141.1); JAJGWF010000142 (original name was: JAJGWF010000142.1); JAJGWF010000143 (original name was: JAJGWF010000143.1); JAJGWF010000144 (original name was: JAJGWF010000144.1); JAJGWF010000145 (original name was: JAJGWF010000145.1); JAJGWF010000146 (original name was: JAJGWF010000146.1); JAJGWF010000147 (original name was: JAJGWF010000147.1); JAJGWF010000148 (original name was: JAJGWF010000148.1); JAJGWF010000149 (original name was: JAJGWF010000149.1); JAJGWF010000015 (original name was: JAJGWF010000015.1); JAJGWF010000150 (original name was: JAJGWF010000150.1); JAJGWF010000151 (original name was: JAJGWF010000151.1); JAJGWF010000152 (original name was: JAJGWF010000152.1); JAJGWF010000153 (original name was: JAJGWF010000153.1); JAJGWF010000154 (original name was: JAJGWF010000154.1); JAJGWF010000155 (original name was: JAJGWF010000155.1); JAJGWF010000157 (original name was: JAJGWF010000157.1); JAJGWF010000158 (original name was: JAJGWF010000158.1); JAJGWF010000027 (original name was: JAJGWF010000027.1); JAJGWF010000028 (original name was: JAJGWF010000028.1); JAJGWF010000029 (original name was: JAJGWF010000029.1); JAJGWF010000034 (original name was: JAJGWF010000034.1); JAJGWF010000035 (original name was: JAJGWF010000035.1); JAJGWF010000039 (original name was: JAJGWF010000039.1); JAJGWF010000041 (original name was: JAJGWF010000041.1); JAJGWF010000042 (original name was: JAJGWF010000042.1); JAJGWF010000046 (original name was: JAJGWF010000046.1); JAJGWF010000047 (original name was: JAJGWF010000047.1); JAJGWF010000053 (original name was: JAJGWF010000053.1); JAJGWF010000057 (original name was: JAJGWF010000057.1); JAJGWF010000058 (original name was: JAJGWF010000058.1); JAJGWF010000072 (original name was: JAJGWF010000072.1); JAJGWF010000073 (original name was: JAJGWF010000073.1); JAJGWF010000074 (original name was: JAJGWF010000074.1); JAJGWF010000089 (original name was: JAJGWF010000089.1); JAJGWF010000096 (original name was: JAJGWF010000096.1); JAJGWF010000097 (original name was: JAJGWF010000097.1)

Compact view

c00054_JAJGWF0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 42,978 - 80,203 nt. (total: 37,226 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00057_JAJGWF0.. - Region 1 - pdu