GCA_020786015.1 - 3 region(s)

Identified primary metabolite regions

JAJGWN010000198 (original name was: JAJGWN010000198.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 22.1	TPP_AA_metabolism	Putative	17,348	54,572

JAJGWN010000199 (original name was: JAJGWN010000199.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 23.1	pdu	SCFA-other	60,560	99,062	Propanediol degradation S. enterica	PDU	66%

JAJGWN010000202 (original name was: JAJGWN010000202.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 26.1	Nitrate_reductase	E-MGC	15,230	41,697	Nitrate reductase E. coli	NIR	40%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 22.1	TPP_AA_metabolism	Putative	17,348	54,572
Region 23.1	pdu	SCFA-other	60,560	99,062	Propanediol degradation S. enterica	PDU	66%
Region 26.1	Nitrate_reductase	E-MGC	15,230	41,697	Nitrate reductase E. coli	NIR	40%

No primary metabolite regions were found in these records:: JAJGWN010000108 (original name was: JAJGWN010000108.1); JAJGWN010000110 (original name was: JAJGWN010000110.1); JAJGWN010000012 (original name was: JAJGWN010000012.1); JAJGWN010000120 (original name was: JAJGWN010000120.1); JAJGWN010000129 (original name was: JAJGWN010000129.1); JAJGWN010000013 (original name was: JAJGWN010000013.1); JAJGWN010000130 (original name was: JAJGWN010000130.1); JAJGWN010000131 (original name was: JAJGWN010000131.1); JAJGWN010000014 (original name was: JAJGWN010000014.1); JAJGWN010000141 (original name was: JAJGWN010000141.1); JAJGWN010000015 (original name was: JAJGWN010000015.1); JAJGWN010000153 (original name was: JAJGWN010000153.1); JAJGWN010000156 (original name was: JAJGWN010000156.1); JAJGWN010000157 (original name was: JAJGWN010000157.1); JAJGWN010000158 (original name was: JAJGWN010000158.1); JAJGWN010000167 (original name was: JAJGWN010000167.1); JAJGWN010000174 (original name was: JAJGWN010000174.1); JAJGWN010000194 (original name was: JAJGWN010000194.1); JAJGWN010000195 (original name was: JAJGWN010000195.1); JAJGWN010000196 (original name was: JAJGWN010000196.1); JAJGWN010000197 (original name was: JAJGWN010000197.1); JAJGWN010000200 (original name was: JAJGWN010000200.1); JAJGWN010000201 (original name was: JAJGWN010000201.1); JAJGWN010000203 (original name was: JAJGWN010000203.1); JAJGWN010000204 (original name was: JAJGWN010000204.1); JAJGWN010000205 (original name was: JAJGWN010000205.1); JAJGWN010000206 (original name was: JAJGWN010000206.1); JAJGWN010000207 (original name was: JAJGWN010000207.1); JAJGWN010000208 (original name was: JAJGWN010000208.1); JAJGWN010000209 (original name was: JAJGWN010000209.1); JAJGWN010000210 (original name was: JAJGWN010000210.1); JAJGWN010000211 (original name was: JAJGWN010000211.1); JAJGWN010000212 (original name was: JAJGWN010000212.1); JAJGWN010000213 (original name was: JAJGWN010000213.1); JAJGWN010000214 (original name was: JAJGWN010000214.1); JAJGWN010000215 (original name was: JAJGWN010000215.1); JAJGWN010000216 (original name was: JAJGWN010000216.1); JAJGWN010000217 (original name was: JAJGWN010000217.1); JAJGWN010000218 (original name was: JAJGWN010000218.1); JAJGWN010000219 (original name was: JAJGWN010000219.1); JAJGWN010000220 (original name was: JAJGWN010000220.1); JAJGWN010000221 (original name was: JAJGWN010000221.1); JAJGWN010000222 (original name was: JAJGWN010000222.1); JAJGWN010000223 (original name was: JAJGWN010000223.1); JAJGWN010000224 (original name was: JAJGWN010000224.1); JAJGWN010000225 (original name was: JAJGWN010000225.1); JAJGWN010000226 (original name was: JAJGWN010000226.1); JAJGWN010000227 (original name was: JAJGWN010000227.1); JAJGWN010000228 (original name was: JAJGWN010000228.1); JAJGWN010000229 (original name was: JAJGWN010000229.1); JAJGWN010000230 (original name was: JAJGWN010000230.1); JAJGWN010000231 (original name was: JAJGWN010000231.1); JAJGWN010000232 (original name was: JAJGWN010000232.1); JAJGWN010000233 (original name was: JAJGWN010000233.1); JAJGWN010000234 (original name was: JAJGWN010000234.1); JAJGWN010000235 (original name was: JAJGWN010000235.1); JAJGWN010000044 (original name was: JAJGWN010000044.1); JAJGWN010000063 (original name was: JAJGWN010000063.1); JAJGWN010000074 (original name was: JAJGWN010000074.1); JAJGWN010000080 (original name was: JAJGWN010000080.1); JAJGWN010000081 (original name was: JAJGWN010000081.1); JAJGWN010000091 (original name was: JAJGWN010000091.1); JAJGWN010000092 (original name was: JAJGWN010000092.1); JAJGWN010000098 (original name was: JAJGWN010000098.1)

Compact view

c00022_JAJGWN0.. - Region 1 - TPP_AA_metabolism

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Location: 17,348 - 54,572 nt. (total: 37,225 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00023_JAJGWN0.. - Region 1 - pdu

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Location: 60,560 - 99,062 nt. (total: 38,503 nt) Show pHMM detection rules used

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00026_JAJGWN0.. - Region 1 - Nitrate_reductase

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Location: 15,230 - 41,697 nt. (total: 26,468 nt) Show pHMM detection rules used

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters