GCA_020829085.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAGTUD010000029 (original name was: JAGTUD010000029.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RaS-RiPP	1	13,023	streptide	RiPP	100%

JAGTUD010000003 (original name was: JAGTUD010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	lanthipeptide-class-i	23,767	47,820

JAGTUD010000032 (original name was: JAGTUD010000032.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	RiPP-like	1	14,181

JAGTUD010000005 (original name was: JAGTUD010000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	NRPS-like	30,309	73,200	asukamycin	Polyketide:Type II	4%

JAGTUD010000009 (original name was: JAGTUD010000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	RRE-containing	1	20,309

No secondary metabolite regions were found in these records:: JAGTUD010000001 (original name was: JAGTUD010000001.1); JAGTUD010000010 (original name was: JAGTUD010000010.1); JAGTUD010000011 (original name was: JAGTUD010000011.1); JAGTUD010000012 (original name was: JAGTUD010000012.1); JAGTUD010000013 (original name was: JAGTUD010000013.1); JAGTUD010000014 (original name was: JAGTUD010000014.1); JAGTUD010000015 (original name was: JAGTUD010000015.1); JAGTUD010000016 (original name was: JAGTUD010000016.1); JAGTUD010000017 (original name was: JAGTUD010000017.1); JAGTUD010000018 (original name was: JAGTUD010000018.1); JAGTUD010000019 (original name was: JAGTUD010000019.1); JAGTUD010000002 (original name was: JAGTUD010000002.1); JAGTUD010000020 (original name was: JAGTUD010000020.1); JAGTUD010000021 (original name was: JAGTUD010000021.1); JAGTUD010000022 (original name was: JAGTUD010000022.1); JAGTUD010000023 (original name was: JAGTUD010000023.1); JAGTUD010000024 (original name was: JAGTUD010000024.1); JAGTUD010000025 (original name was: JAGTUD010000025.1); JAGTUD010000026 (original name was: JAGTUD010000026.1); JAGTUD010000027 (original name was: JAGTUD010000027.1); JAGTUD010000028 (original name was: JAGTUD010000028.1); JAGTUD010000030 (original name was: JAGTUD010000030.1); JAGTUD010000031 (original name was: JAGTUD010000031.1); JAGTUD010000033 (original name was: JAGTUD010000033.1); JAGTUD010000034 (original name was: JAGTUD010000034.1); JAGTUD010000035 (original name was: JAGTUD010000035.1); JAGTUD010000036 (original name was: JAGTUD010000036.1); JAGTUD010000037 (original name was: JAGTUD010000037.1); JAGTUD010000038 (original name was: JAGTUD010000038.1); JAGTUD010000039 (original name was: JAGTUD010000039.1); JAGTUD010000004 (original name was: JAGTUD010000004.1); JAGTUD010000040 (original name was: JAGTUD010000040.1); JAGTUD010000006 (original name was: JAGTUD010000006.1); JAGTUD010000007 (original name was: JAGTUD010000007.1); JAGTUD010000008 (original name was: JAGTUD010000008.1)

Compact view

c00022_JAGTUD0.. - Region 1 - RaS-RiPP

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Location: 1 - 13,023 nt. (total: 13,023 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00023_JAGTUD0.. - Region 1 - lanthipeptide-class-i

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Location: 23,767 - 47,820 nt. (total: 24,054 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00026_JAGTUD0.. - Region 1 - RiPP-like

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Location: 1 - 14,181 nt. (total: 14,181 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00036_JAGTUD0.. - Region 1 - NRPS-like

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Location: 30,309 - 73,200 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

c00040_JAGTUD0.. - Region 1 - RRE-containing

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Location: 1 - 20,309 nt. (total: 20,309 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.