GCA_020829095.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAGSSZ010000015 (original name was: JAGSSZ010000015.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RaS-RiPP	31,361	49,340

JAGSSZ010000024 (original name was: JAGSSZ010000024.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	RiPP-like	1	14,186
Region 17.2	RaS-RiPP	156,843	179,267	streptide	RiPP	100%

JAGSSZ010000003 (original name was: JAGSSZ010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	lanthipeptide-class-i	23,767	47,820

JAGSSZ010000005 (original name was: JAGSSZ010000005.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	NRPS-like	30,309	73,200	asukamycin	Polyketide:Type II	4%

JAGSSZ010000008 (original name was: JAGSSZ010000008.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	RRE-containing	1	20,309

Region	Type	From	To	Most similar known cluster	Similarity
Region 7.1	RaS-RiPP	31,361	49,340
Region 17.1	RiPP-like	1	14,186
Region 17.2	RaS-RiPP	156,843	179,267	streptide	RiPP	100%
Region 23.1	lanthipeptide-class-i	23,767	47,820
Region 28.1	NRPS-like	30,309	73,200	asukamycin	Polyketide:Type II	4%
Region 31.1	RRE-containing	1	20,309

No secondary metabolite regions were found in these records:: JAGSSZ010000001 (original name was: JAGSSZ010000001.1); JAGSSZ010000010 (original name was: JAGSSZ010000010.1); JAGSSZ010000011 (original name was: JAGSSZ010000011.1); JAGSSZ010000012 (original name was: JAGSSZ010000012.1); JAGSSZ010000013 (original name was: JAGSSZ010000013.1); JAGSSZ010000014 (original name was: JAGSSZ010000014.1); JAGSSZ010000016 (original name was: JAGSSZ010000016.1); JAGSSZ010000017 (original name was: JAGSSZ010000017.1); JAGSSZ010000018 (original name was: JAGSSZ010000018.1); JAGSSZ010000019 (original name was: JAGSSZ010000019.1); JAGSSZ010000002 (original name was: JAGSSZ010000002.1); JAGSSZ010000020 (original name was: JAGSSZ010000020.1); JAGSSZ010000021 (original name was: JAGSSZ010000021.1); JAGSSZ010000022 (original name was: JAGSSZ010000022.1); JAGSSZ010000023 (original name was: JAGSSZ010000023.1); JAGSSZ010000025 (original name was: JAGSSZ010000025.1); JAGSSZ010000026 (original name was: JAGSSZ010000026.1); JAGSSZ010000027 (original name was: JAGSSZ010000027.1); JAGSSZ010000028 (original name was: JAGSSZ010000028.1); JAGSSZ010000029 (original name was: JAGSSZ010000029.1); JAGSSZ010000030 (original name was: JAGSSZ010000030.1); JAGSSZ010000031 (original name was: JAGSSZ010000031.1); JAGSSZ010000032 (original name was: JAGSSZ010000032.1); JAGSSZ010000004 (original name was: JAGSSZ010000004.1); JAGSSZ010000006 (original name was: JAGSSZ010000006.1); JAGSSZ010000007 (original name was: JAGSSZ010000007.1); JAGSSZ010000009 (original name was: JAGSSZ010000009.1)

Compact view

c00007_JAGSSZ0.. - Region 1 - RaS-RiPP

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Location: 31,361 - 49,340 nt. (total: 17,980 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00017_JAGSSZ0.. - Region 1 - RiPP-like

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Location: 1 - 14,186 nt. (total: 14,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00017_JAGSSZ0.. - Region 2 - RaS-RiPP

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Location: 156,843 - 179,267 nt. (total: 22,425 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00023_JAGSSZ0.. - Region 1 - lanthipeptide-class-i

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Location: 23,767 - 47,820 nt. (total: 24,054 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00028_JAGSSZ0.. - Region 1 - NRPS-like

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Location: 30,309 - 73,200 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

c00031_JAGSSZ0.. - Region 1 - RRE-containing

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Location: 1 - 20,309 nt. (total: 20,309 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.