GCA_021300595.1 - 4 region(s)

Identified primary metabolite regions

JAJTJS010000023 (original name was: JAJTJS010000023.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 15.1	gallic_acid_met	Aromatic	1	12,866	Gallic acid degradation B. sp. KLE	GALL	100%

JAJTJS010000004 (original name was: JAJTJS010000004.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 44.1	TPP_fatty_acids	Putative	44,670	70,544

JAJTJS010000005 (original name was: JAJTJS010000005.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 55.1	TPP_AA_metabolism	Putative	6,210	38,338

JAJTJS010000006 (original name was: JAJTJS010000006.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 66.1	Pyruvate2acetate-formate	SCFA	105,969	129,219	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: JAJTJS010000010 (original name was: JAJTJS010000010.1); JAJTJS010000011 (original name was: JAJTJS010000011.1); JAJTJS010000012 (original name was: JAJTJS010000012.1); JAJTJS010000013 (original name was: JAJTJS010000013.1); JAJTJS010000014 (original name was: JAJTJS010000014.1); JAJTJS010000015 (original name was: JAJTJS010000015.1); JAJTJS010000016 (original name was: JAJTJS010000016.1); JAJTJS010000017 (original name was: JAJTJS010000017.1); JAJTJS010000018 (original name was: JAJTJS010000018.1); JAJTJS010000019 (original name was: JAJTJS010000019.1); JAJTJS010000001 (original name was: JAJTJS010000001.1); JAJTJS010000020 (original name was: JAJTJS010000020.1); JAJTJS010000021 (original name was: JAJTJS010000021.1); JAJTJS010000022 (original name was: JAJTJS010000022.1); JAJTJS010000024 (original name was: JAJTJS010000024.1); JAJTJS010000025 (original name was: JAJTJS010000025.1); JAJTJS010000026 (original name was: JAJTJS010000026.1); JAJTJS010000027 (original name was: JAJTJS010000027.1); JAJTJS010000028 (original name was: JAJTJS010000028.1); JAJTJS010000029 (original name was: JAJTJS010000029.1); JAJTJS010000002 (original name was: JAJTJS010000002.1); JAJTJS010000030 (original name was: JAJTJS010000030.1); JAJTJS010000031 (original name was: JAJTJS010000031.1); JAJTJS010000032 (original name was: JAJTJS010000032.1); JAJTJS010000033 (original name was: JAJTJS010000033.1); JAJTJS010000034 (original name was: JAJTJS010000034.1); JAJTJS010000035 (original name was: JAJTJS010000035.1); JAJTJS010000036 (original name was: JAJTJS010000036.1); JAJTJS010000037 (original name was: JAJTJS010000037.1); JAJTJS010000038 (original name was: JAJTJS010000038.1); JAJTJS010000039 (original name was: JAJTJS010000039.1); JAJTJS010000003 (original name was: JAJTJS010000003.1); JAJTJS010000040 (original name was: JAJTJS010000040.1); JAJTJS010000041 (original name was: JAJTJS010000041.1); JAJTJS010000042 (original name was: JAJTJS010000042.1); JAJTJS010000043 (original name was: JAJTJS010000043.1); JAJTJS010000044 (original name was: JAJTJS010000044.1); JAJTJS010000045 (original name was: JAJTJS010000045.1); JAJTJS010000046 (original name was: JAJTJS010000046.1); JAJTJS010000047 (original name was: JAJTJS010000047.1); JAJTJS010000048 (original name was: JAJTJS010000048.1); JAJTJS010000049 (original name was: JAJTJS010000049.1); JAJTJS010000050 (original name was: JAJTJS010000050.1); JAJTJS010000051 (original name was: JAJTJS010000051.1); JAJTJS010000052 (original name was: JAJTJS010000052.1); JAJTJS010000053 (original name was: JAJTJS010000053.1); JAJTJS010000054 (original name was: JAJTJS010000054.1); JAJTJS010000055 (original name was: JAJTJS010000055.1); JAJTJS010000056 (original name was: JAJTJS010000056.1); JAJTJS010000057 (original name was: JAJTJS010000057.1); JAJTJS010000058 (original name was: JAJTJS010000058.1); JAJTJS010000059 (original name was: JAJTJS010000059.1); JAJTJS010000060 (original name was: JAJTJS010000060.1); JAJTJS010000061 (original name was: JAJTJS010000061.1); JAJTJS010000062 (original name was: JAJTJS010000062.1); JAJTJS010000063 (original name was: JAJTJS010000063.1); JAJTJS010000064 (original name was: JAJTJS010000064.1); JAJTJS010000065 (original name was: JAJTJS010000065.1); JAJTJS010000066 (original name was: JAJTJS010000066.1); JAJTJS010000067 (original name was: JAJTJS010000067.1); JAJTJS010000068 (original name was: JAJTJS010000068.1); JAJTJS010000069 (original name was: JAJTJS010000069.1); JAJTJS010000070 (original name was: JAJTJS010000070.1); JAJTJS010000071 (original name was: JAJTJS010000071.1); JAJTJS010000072 (original name was: JAJTJS010000072.1); JAJTJS010000073 (original name was: JAJTJS010000073.1); JAJTJS010000007 (original name was: JAJTJS010000007.1); JAJTJS010000008 (original name was: JAJTJS010000008.1); JAJTJS010000009 (original name was: JAJTJS010000009.1)

Compact view

c00015_JAJTJS0.. - Region 1 - gallic_acid_met

Download region GenBank file

Location: 1 - 12,866 nt. (total: 12,866 nt) Show pHMM detection rules used

Region on contig edge.

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00044_JAJTJS0.. - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 44,670 - 70,544 nt. (total: 25,875 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00055_JAJTJS0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 6,210 - 38,338 nt. (total: 32,129 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00066_JAJTJS0.. - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 105,969 - 129,219 nt. (total: 23,251 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters