# emapper version: emapper-2.0.1b-2-g816e190 emapper DB: 2.0 # command: ./emapper.py -i Bifidobacterium_pseudocatenulatum/1.contigAnn/FFN/A00000131.ffn --translate --temp_dir Bifidobacterium_pseudocatenulatum/4.eggNOG_mapper --output_dir Bifidobacterium_pseudocatenulatum/4.eggNOG_mapper --output A00000131 --cpu 36 --keep_mapping_files -m diamond # time: Mon Jun 6 13:12:27 2022 #query_name seed_eggNOG_ortholog seed_ortholog_evalue seed_ortholog_score best_tax_level Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction taxonomic scope eggNOG OGs best eggNOG OG COG Functional cat. eggNOG free text desc. KDBPDICH_00001 547043.BIFPSEUDO_04051 9.4e-269 932.2 Bifidobacteriales tgt 2.4.2.29 ko:K00773 R03789,R10209 RC00063 ko00000,ko01000,ko03016 Bacteria 2GMWY@201174,4CZNX@85004,COG0343@1,COG0343@2 NA|NA|NA F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) KDBPDICH_00002 547043.BIFPSEUDO_04052 2.8e-290 1004.2 Bifidobacteriales degP ko:K08372 ko02020,map02020 ko00000,ko00001,ko01000,ko01002 Bacteria 2GJ96@201174,4CZAP@85004,COG0265@1,COG0265@2 NA|NA|NA O Domain present in PSD-95, Dlg, and ZO-1/2. KDBPDICH_00003 547043.BIFPSEUDO_04053 0.0 1402.1 Bifidobacteriales cadA Bacteria 2GIRF@201174,4CZ4F@85004,COG2217@1,COG2217@2 NA|NA|NA P E1-E2 ATPase KDBPDICH_00004 547043.BIFPSEUDO_04054 7.9e-188 662.9 Bifidobacteriales ansA GO:0003674,GO:0003824,GO:0004067,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006530,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009066,GO:0009068,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032787,GO:0033345,GO:0034641,GO:0042802,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:0072329,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 R00485 RC00010,RC02798 ko00000,ko00001,ko01000 iECO103_1326.ECO103_1961,iSF_1195.SF1456,iS_1188.S1571,iYL1228.KPN_01203 Bacteria 2HUB2@201174,4CZY6@85004,COG0252@1,COG0252@2 NA|NA|NA EJ Asparaginase KDBPDICH_00005 547043.BIFPSEUDO_04057 3.1e-270 937.2 Bifidobacteriales fprA 1.18.1.2,1.19.1.1 ko:K00528 R10159 ko00000,ko01000 Bacteria 2GJ4A@201174,4CZIT@85004,COG0493@1,COG0493@2 NA|NA|NA C Pyridine nucleotide-disulphide oxidoreductase KDBPDICH_00006 547043.BIFPSEUDO_04058 1.2e-181 642.5 Bifidobacteriales htpX GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K03799 M00743 ko00000,ko00002,ko01000,ko01002 Bacteria 2GMJF@201174,4CYVY@85004,COG0501@1,COG0501@2 NA|NA|NA O Belongs to the peptidase M48B family KDBPDICH_00008 547043.BIFPSEUDO_04061 4.6e-64 250.8 Bifidobacteriales Bacteria 2IBHI@201174,4CZ2T@85004,COG1476@1,COG1476@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins KDBPDICH_00009 547043.BIFPSEUDO_04062 7e-170 603.2 Bifidobacteriales yddG GO:0003333,GO:0003674,GO:0005215,GO:0005302,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015173,GO:0015179,GO:0015192,GO:0015196,GO:0015238,GO:0015318,GO:0015711,GO:0015801,GO:0015807,GO:0015823,GO:0015827,GO:0015828,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1905039 iBWG_1329.BWG_1294,iE2348C_1286.E2348C_1607,iECDH10B_1368.ECDH10B_1604,iECDH1ME8569_1439.ECDH1ME8569_1416,iECS88_1305.ECS88_1565,iEcDH1_1363.EcDH1_2175,iJO1366.b1473,iNRG857_1313.NRG857_07295,iSSON_1240.SSON_1651,iUMN146_1321.UM146_09675 Bacteria 2GM6M@201174,4CZPP@85004,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family KDBPDICH_00010 547043.BIFPSEUDO_04063 0.0 1075.8 Bifidobacteriales pip ko:K01421 ko00000 Bacteria 2GKEM@201174,4CZ2A@85004,COG1511@1,COG1511@2 NA|NA|NA S YhgE Pip domain protein KDBPDICH_00011 1680.BADO_0052 0.0 1436.8 Bifidobacteriales pip ko:K01421 ko00000 Bacteria 2GKEM@201174,4CZ9R@85004,COG1511@1,COG1511@2 NA|NA|NA S YhgE Pip domain protein KDBPDICH_00012 547043.BIFPSEUDO_04065 4.1e-206 723.8 Bifidobacteriales fbaA GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016830,GO:0016832,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 iZ_1308.Z4263 Bacteria 2GM5P@201174,4CZJI@85004,COG0191@1,COG0191@2 NA|NA|NA G Fructose-bisphosphate aldolase class-II KDBPDICH_00013 547043.BIFPSEUDO_04067 8.6e-248 862.4 Bifidobacteriales purA GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 Bacteria 2GMP4@201174,4CZ0U@85004,COG0104@1,COG0104@2 NA|NA|NA F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP KDBPDICH_00014 547043.BIFPSEUDO_04068 2.9e-253 880.9 Bifidobacteriales clcA GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006821,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015672,GO:0015698,GO:0015706,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0031404,GO:0034220,GO:0042802,GO:0043167,GO:0043168,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071705,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 ko:K03281,ko:K03499 ko00000,ko02000 2.A.38.1,2.A.38.4,2.A.49 iAF1260.b0155,iB21_1397.B21_00153,iBWG_1329.BWG_0148,iE2348C_1286.E2348C_0162,iEC042_1314.EC042_0155,iEC55989_1330.EC55989_0149,iECBD_1354.ECBD_3463,iECDH10B_1368.ECDH10B_0135,iECDH1ME8569_1439.ECDH1ME8569_0149,iECD_1391.ECD_00154,iECIAI1_1343.ECIAI1_0153,iECO103_1326.ECO103_0155,iECSE_1348.ECSE_0156,iECUMN_1333.ECUMN_0152,iECW_1372.ECW_m0152,iEKO11_1354.EKO11_3761,iETEC_1333.ETEC_0151,iEcDH1_1363.EcDH1_3447,iEcE24377_1341.EcE24377A_0160,iEcolC_1368.EcolC_3504,iJO1366.b0155,iSSON_1240.SSON_0167,iUMNK88_1353.UMNK88_159,iWFL_1372.ECW_m0152,iY75_1357.Y75_RS00790,iZ_1308.Z0166 Bacteria 2GPPN@201174,4CZQR@85004,COG0038@1,COG0038@2,COG0569@1,COG0569@2 NA|NA|NA P Voltage gated chloride channel KDBPDICH_00015 1680.BADO_0056 6.9e-84 317.8 Bifidobacteriales ko:K06199 ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 Bacteria 2IC26@201174,4D0RK@85004,COG0239@1,COG0239@2 NA|NA|NA U Important for reducing fluoride concentration in the cell, thus reducing its toxicity KDBPDICH_00016 216816.GS08_00515 6.6e-42 176.8 Bifidobacteriales crcB ko:K06199 ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 Bacteria 2IC26@201174,4D14T@85004,COG0239@1,COG0239@2 NA|NA|NA U Important for reducing fluoride concentration in the cell, thus reducing its toxicity KDBPDICH_00017 547043.BIFPSEUDO_04073 2.2e-188 664.8 Bifidobacteriales ko:K02529,ko:K03484 ko00000,ko03000 Bacteria 2GMHV@201174,4CZ3G@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_00018 547043.BIFPSEUDO_04074 7.6e-296 1022.3 Bifidobacteriales gtfA GO:0003674,GO:0003824,GO:0004645,GO:0005975,GO:0005976,GO:0006066,GO:0006073,GO:0008150,GO:0008152,GO:0009018,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0019400,GO:0019751,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0051472,GO:0071704,GO:1901615 2.4.1.329,2.4.1.7 ko:K00690,ko:K21350 ko00500,map00500 R00803 RC00028 ko00000,ko00001,ko01000 GH13 Bacteria 2GNEC@201174,4CZ4T@85004,COG0366@1,COG0366@2 NA|NA|NA G Domain of unknown function (DUF1964) KDBPDICH_00019 547043.BIFPSEUDO_04075 2.9e-114 417.9 Bifidobacteriales Bacteria 2IHJ3@201174,4D0SU@85004,COG5578@1,COG5578@2 NA|NA|NA S Protein of unknown function, DUF624 KDBPDICH_00020 547043.BIFPSEUDO_04076 0.0 1218.4 Bifidobacteriales 3.2.1.1,5.4.99.16 ko:K05343 ko00500,ko01100,map00500,map01100 R01557,R02108,R02112,R11262 RC01816 ko00000,ko00001,ko01000 GH13 Bacteria 2GIV1@201174,4D02P@85004,COG0366@1,COG0366@2 NA|NA|NA G Alpha-amylase domain KDBPDICH_00021 547043.BIFPSEUDO_04077 9.3e-218 762.7 Bifidobacteriales ko:K10108,ko:K10117,ko:K15770 ko02010,ko02030,map02010,map02030 M00194,M00196,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.22,3.A.1.1.28 Bacteria 2I5YS@201174,4D0AK@85004,COG2182@1,COG2182@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_00022 547043.BIFPSEUDO_04078 2.4e-161 574.7 Bifidobacteriales amyD3 ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2IB68@201174,4D00T@85004,COG1175@1,COG1175@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_00023 547043.BIFPSEUDO_04079 1.4e-148 532.3 Bifidobacteriales amyC5 ko:K10119 ko02010,map02010 M00196 ko00000,ko00001,ko00002,ko02000 3.A.1.1.28 Bacteria 2GJNN@201174,4CZ44@85004,COG0395@1,COG0395@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_00024 566552.BIFCAT_00112 2.7e-238 831.2 Bifidobacteriales scrT Bacteria 2GJZG@201174,4CZ93@85004,COG2211@1,COG2211@2 NA|NA|NA G Transporter major facilitator family protein KDBPDICH_00025 566552.BIFCAT_00114 6.7e-251 872.8 Bifidobacteriales yhjE Bacteria 2GIYR@201174,4CYY8@85004,COG0477@1,COG0477@2 NA|NA|NA EGP Sugar (and other) transporter KDBPDICH_00026 547043.BIFPSEUDO_04085 1.8e-203 714.9 Bifidobacteriales ilvC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008677,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 1.1.1.86 ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R03051,R04439,R04440,R05068,R05069,R05071 RC00726,RC00836,RC00837,RC01726 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKXA@201174,4CZBR@85004,COG0059@1,COG0059@2 NA|NA|NA H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate KDBPDICH_00027 547043.BIFPSEUDO_04087 1.2e-202 712.2 Bifidobacteriales ilvC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008677,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 1.1.1.86 ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R03051,R04439,R04440,R05068,R05069,R05071 RC00726,RC00836,RC00837,RC01726 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKXA@201174,4CZBR@85004,COG0059@1,COG0059@2 NA|NA|NA H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate KDBPDICH_00028 547043.BIFPSEUDO_04089 0.0 1243.4 Bifidobacteriales 3.1.1.53 ko:K05970 ko00000,ko01000 Bacteria 2I2FJ@201174,4D2US@85004,COG2755@1,COG2755@2 NA|NA|NA E Carbohydrate esterase, sialic acid-specific acetylesterase KDBPDICH_00029 547043.BIFPSEUDO_04090 5.8e-40 169.9 Bifidobacteriales Bacteria 2GM69@201174,4D09M@85004,COG3250@1,COG3250@2 NA|NA|NA G beta-mannosidase KDBPDICH_00030 547043.BIFPSEUDO_04091 6.2e-188 663.3 Bifidobacteriales Bacteria 2GJHF@201174,4CZCC@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_00031 1680.BADO_0080 8.3e-12 76.3 Bifidobacteriales Bacteria 2IGDH@201174,4D0WB@85004,COG5578@1,COG5578@2 NA|NA|NA S Protein of unknown function, DUF624 KDBPDICH_00032 547043.BIFPSEUDO_04093 4.1e-270 936.8 Bifidobacteriales aroP GO:0003333,GO:0003674,GO:0005215,GO:0005302,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008104,GO:0008150,GO:0008320,GO:0008324,GO:0008509,GO:0008514,GO:0008565,GO:0009977,GO:0015031,GO:0015075,GO:0015171,GO:0015173,GO:0015179,GO:0015192,GO:0015196,GO:0015238,GO:0015291,GO:0015318,GO:0015399,GO:0015405,GO:0015450,GO:0015711,GO:0015801,GO:0015807,GO:0015823,GO:0015827,GO:0015828,GO:0015833,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0033036,GO:0034220,GO:0042221,GO:0042493,GO:0042886,GO:0042887,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1904680,GO:1905039 ko:K03293,ko:K11732,ko:K11734 ko00000,ko02000 2.A.3.1,2.A.3.1.1,2.A.3.1.3 iAPECO1_1312.APECO1_1472,iECW_1372.ECW_m0628,iEcE24377_1341.EcE24377A_0114,iEcolC_1368.EcolC_3070,iJN746.PP_4495,iUTI89_1310.UTI89_C0576,iWFL_1372.ECW_m0628 Bacteria 2GJ0X@201174,4CZ4X@85004,COG1113@1,COG1113@2 NA|NA|NA E aromatic amino acid transport protein AroP K03293 KDBPDICH_00033 547043.BIFPSEUDO_04095 0.0 1598.2 Bifidobacteriales ko:K02004,ko:K06994 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2I2FK@201174,4CZJR@85004,COG0577@1,COG0577@2,COG1511@1,COG1511@2 NA|NA|NA V FtsX-like permease family KDBPDICH_00034 547043.BIFPSEUDO_04096 3.3e-227 794.3 Bifidobacteriales ko:K03455 ko00000 2.A.37 Bacteria 2GIRC@201174,4CZGM@85004,COG0475@1,COG0475@2 NA|NA|NA P Sodium/hydrogen exchanger family KDBPDICH_00035 547043.BIFPSEUDO_04098 6.3e-76 290.0 Bifidobacteriales Bacteria 2DNNA@1,2ISEY@201174,32Y8E@2,4D0R1@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00036 547043.BIFPSEUDO_04099 5.8e-173 613.6 Bifidobacteriales 3.4.22.70 ko:K07284 ko00000,ko01000,ko01002,ko01011 Bacteria 2GNWT@201174,4CZMM@85004,COG3764@1,COG3764@2 NA|NA|NA M Sortase family KDBPDICH_00037 547043.BIFPSEUDO_04100 0.0 1551.6 Bifidobacteriales inlJ ko:K07114 ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 Bacteria 2I2FM@201174,4CZ4I@85004,COG2304@1,COG2304@2,COG4932@1,COG4932@2 NA|NA|NA M domain protein KDBPDICH_00038 547043.BIFPSEUDO_04102 2.2e-210 738.4 Bifidobacteriales Bacteria 2GP68@201174,4CZV4@85004,COG4932@1,COG4932@2 NA|NA|NA M LPXTG cell wall anchor motif KDBPDICH_00039 547043.BIFPSEUDO_04104 2.5e-89 334.7 Bifidobacteriales Bacteria 2ASX6@1,2IHV1@201174,31ICR@2,4D0WZ@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00040 547043.BIFPSEUDO_04106 9.9e-275 952.2 Bifidobacteriales cycA GO:0001761,GO:0001762,GO:0003333,GO:0003674,GO:0005215,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015180,GO:0015187,GO:0015238,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015808,GO:0015816,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0022858,GO:0022889,GO:0032328,GO:0032329,GO:0034220,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0042940,GO:0042941,GO:0042942,GO:0042943,GO:0042944,GO:0042945,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1905039 ko:K03293,ko:K11737 ko00000,ko02000 2.A.3.1,2.A.3.1.7 iECO111_1330.ECO111_5093,iECO26_1355.ECO26_5376,iEcHS_1320.EcHS_A4458,iSbBS512_1146.SbBS512_E4749,iYL1228.KPN_04601 Bacteria 2GJ0X@201174,4CZAY@85004,COG1113@1,COG1113@2 NA|NA|NA E Amino acid permease KDBPDICH_00041 547043.BIFPSEUDO_04107 1.2e-166 592.4 Bifidobacteriales thiG GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 ko:K03149 ko00730,ko01100,map00730,map01100 R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 iECABU_c1320.ECABU_c45060,iECO26_1355.ECO26_5099,ic_1306.c4947 Bacteria 2GM62@201174,4CZ4A@85004,COG2022@1,COG2022@2 NA|NA|NA H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S KDBPDICH_00042 547043.BIFPSEUDO_04108 2.6e-129 468.0 Bifidobacteriales thiF 2.7.7.73,2.7.7.80 ko:K03148,ko:K21029 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07459 RC00043 ko00000,ko00001,ko01000 Bacteria 2GJB6@201174,4D06G@85004,COG0476@1,COG0476@2 NA|NA|NA H ThiF family KDBPDICH_00043 547043.BIFPSEUDO_04109 3.8e-26 123.6 Bifidobacteriales thiS 2.8.1.10 ko:K03149,ko:K03154 ko00730,ko01100,ko04122,map00730,map01100,map04122 R10247 RC03096,RC03097,RC03461 ko00000,ko00001,ko01000 Bacteria 2GSKM@201174,4D1GS@85004,COG2104@1,COG2104@2 NA|NA|NA H ThiS family KDBPDICH_00044 566552.BIFCAT_00134 4.1e-179 634.0 Bifidobacteriales 1.1.1.65 ko:K05275 ko00750,ko01100,ko01120,map00750,map01100,map01120 R01708 RC00116 ko00000,ko00001,ko01000 Bacteria 2GJ6R@201174,4CZ9P@85004,COG0667@1,COG0667@2 NA|NA|NA C Aldo/keto reductase family KDBPDICH_00045 1435051.BMOU_1440 2.4e-57 228.4 Bifidobacteriales ydgJ Bacteria 2IMKE@201174,4CYZZ@85004,COG1846@1,COG1846@2 NA|NA|NA K helix_turn_helix multiple antibiotic resistance protein KDBPDICH_00046 78345.BMERY_0521 3.5e-285 987.3 Bifidobacteriales lmrA1 ko:K02021,ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21 Bacteria 2GITR@201174,4CYYV@85004,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter, ATP-binding protein KDBPDICH_00047 78345.BMERY_0522 0.0 1080.5 Bifidobacteriales lmrA2 ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 2GITR@201174,4CZTU@85004,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region KDBPDICH_00048 401473.BDP_0156 2.4e-117 428.7 Bifidobacteriales apbE 2.7.1.180 ko:K03734 ko00000,ko01000 Bacteria 2H8YU@201174,4CZW7@85004,COG1477@1,COG1477@2 NA|NA|NA H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein KDBPDICH_00049 1435051.BMOU_1445 7.5e-237 826.2 Bifidobacteriales ko:K03292 ko00000 2.A.2 Bacteria 2HZ98@201174,4CZ0N@85004,COG2211@1,COG2211@2 NA|NA|NA G MFS/sugar transport protein KDBPDICH_00050 547043.BIFPSEUDO_04117 3.7e-302 1043.5 Bifidobacteriales efeU_1 ko:K07243 ko00000,ko02000 2.A.108.1,2.A.108.2 Bacteria 2GJ22@201174,4D01C@85004,COG0672@1,COG0672@2 NA|NA|NA P Iron permease FTR1 family KDBPDICH_00051 547043.BIFPSEUDO_04118 1.5e-94 352.4 Bifidobacteriales tpd ko:K07230 ko00000,ko02000 2.A.108.2.10,2.A.108.2.4,2.A.108.2.9 Bacteria 2GNAD@201174,4CZCG@85004,COG3470@1,COG3470@2 NA|NA|NA P Fe2+ transport protein KDBPDICH_00052 547043.BIFPSEUDO_04121 7.2e-231 806.2 Bifidobacteriales Bacteria 2GMS6@201174,4CZ19@85004,COG4393@1,COG4393@2 NA|NA|NA S Predicted membrane protein (DUF2318) KDBPDICH_00053 566552.BIFCAT_00144 9.4e-221 772.7 Bifidobacteriales macB_2 ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2I91N@201174,4CZGK@85004,COG0577@1,COG0577@2 NA|NA|NA V ABC transporter permease KDBPDICH_00055 547043.BIFPSEUDO_04123 5.4e-202 710.3 Bifidobacteriales Z012_06715 ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GIRW@201174,4CZEZ@85004,COG0577@1,COG0577@2 NA|NA|NA V FtsX-like permease family KDBPDICH_00056 566552.BIFCAT_00146 2.9e-148 531.2 Bifidobacteriales macB ko:K02003,ko:K09810 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.125 Bacteria 2GK3I@201174,4CYTA@85004,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein KDBPDICH_00057 547043.BIFPSEUDO_04125 1.1e-61 243.0 Bifidobacteriales ko:K03612 ko00000 Bacteria 2IQ4E@201174,4D0YM@85004,COG3976@1,COG3976@2 NA|NA|NA S FMN_bind KDBPDICH_00058 566552.BIFCAT_00148 1.6e-88 332.4 Bifidobacteriales Bacteria 2HZI8@201174,4D0IS@85004,COG1309@1,COG1309@2 NA|NA|NA K Psort location Cytoplasmic, score 8.87 KDBPDICH_00059 547043.BIFPSEUDO_04127 3.6e-278 964.1 Bifidobacteriales pip ko:K01421 ko00000 Bacteria 2GKEM@201174,4CZ2A@85004,COG1511@1,COG1511@2 NA|NA|NA S YhgE Pip domain protein KDBPDICH_00060 566552.BIFCAT_00150 0.0 1294.6 Bifidobacteriales pip ko:K01421 ko00000 Bacteria 2GKEM@201174,4CZ9R@85004,COG1511@1,COG1511@2 NA|NA|NA S YhgE Pip domain protein KDBPDICH_00061 547043.BIFPSEUDO_04129 7.7e-225 786.2 Bifidobacteriales Bacteria 2IBSV@201174,4D05G@85004,COG4905@1,COG4905@2 NA|NA|NA S Putative ABC-transporter type IV KDBPDICH_00062 547043.BIFPSEUDO_04130 6e-38 162.9 Bifidobacteriales nrdH ko:K06191 ko00000 Bacteria 2IRCP@201174,4D17U@85004,COG0695@1,COG0695@2 NA|NA|NA O Glutaredoxin KDBPDICH_00065 566552.BIFCAT_00154 3.1e-306 1057.0 Bifidobacteriales pepD ko:K08659 ko00000,ko01000,ko01002 Bacteria 2GM80@201174,4CYT0@85004,COG4690@1,COG4690@2 NA|NA|NA E Peptidase family C69 KDBPDICH_00066 566552.BIFCAT_00156 4e-195 687.2 Bifidobacteriales XK27_01805 Bacteria 2GMDK@201174,4CZIS@85004,COG0463@1,COG0463@2 NA|NA|NA M Glycosyltransferase like family 2 KDBPDICH_00067 547043.BIFPSEUDO_02895 3.1e-110 404.8 Bifidobacteriales icaR Bacteria 2GMBW@201174,4CYUD@85004,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family KDBPDICH_00068 547043.BIFPSEUDO_02894 8.6e-168 596.7 Bifidobacteriales ftsY GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 Bacteria 2GJQH@201174,4CZZX@85004,COG0552@1,COG0552@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) KDBPDICH_00069 547043.BIFPSEUDO_02893 1.2e-236 825.5 Bifidobacteriales amt ko:K03320 ko00000,ko02000 1.A.11 Bacteria 2GIZK@201174,4CZA0@85004,COG0004@1,COG0004@2 NA|NA|NA U Ammonium Transporter Family KDBPDICH_00070 158787.BSCA_0063 1e-54 219.2 Bifidobacteriales glnB ko:K04751 ko02020,map02020 ko00000,ko00001 Bacteria 2IKN1@201174,4D0VD@85004,COG0347@1,COG0347@2 NA|NA|NA K Nitrogen regulatory protein P-II KDBPDICH_00071 547043.BIFPSEUDO_02891 0.0 1211.1 Bifidobacteriales 2.7.7.19,2.7.7.59 ko:K00970,ko:K00990 ko02020,ko03018,map02020,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 2GMKT@201174,4D07P@85004,COG2844@1,COG2844@2 NA|NA|NA O Nucleotidyltransferase domain KDBPDICH_00072 547043.BIFPSEUDO_02890 3.3e-248 864.0 Bifidobacteriales dnaB GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0030312,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Bacteria 2GKXQ@201174,4CYY3@85004,COG0305@1,COG0305@2 NA|NA|NA L Participates in initiation and elongation during chromosome replication KDBPDICH_00073 566552.BIFCAT_00167 3.9e-252 877.1 Bifidobacteriales murD 3.4.21.10,6.3.2.13,6.3.2.9 ko:K01317,ko:K01925,ko:K01928,ko:K01932 ko00300,ko00471,ko00550,ko01100,map00300,map00471,map00550,map01100 R02783,R02788 RC00064,RC00090,RC00141 ko00000,ko00001,ko01000,ko01002,ko01011,ko04131 Bacteria 2GK18@201174,4CYTP@85004,COG0771@1,COG0771@2 NA|NA|NA M Domain of unknown function (DUF1727) KDBPDICH_00074 547043.BIFPSEUDO_02888 3.3e-138 497.7 Bifidobacteriales cobQ ko:K07009 ko00000 iSB619.SA_RS09800 Bacteria 2GKPV@201174,4CZJ1@85004,COG3442@1,COG3442@2 NA|NA|NA S CobB/CobQ-like glutamine amidotransferase domain KDBPDICH_00075 547043.BIFPSEUDO_02886 1e-27 129.0 Bifidobacteriales Bacteria 2GS3M@201174,4D1FE@85004,COG3937@1,COG3937@2 NA|NA|NA S granule-associated protein KDBPDICH_00076 547043.BIFPSEUDO_02885 0.0 1103.2 Bifidobacteriales ubiB ko:K03688 ko00000 Bacteria 2GJQ6@201174,4CZ45@85004,COG0661@1,COG0661@2 NA|NA|NA S ABC1 family KDBPDICH_00077 547043.BIFPSEUDO_02884 4.1e-192 677.2 Bifidobacteriales ko:K02529 ko00000,ko03000 Bacteria 2GJV7@201174,4CZND@85004,COG1609@1,COG1609@2 NA|NA|NA K Periplasmic binding protein domain KDBPDICH_00078 547043.BIFPSEUDO_02883 4.3e-242 843.6 Bifidobacteriales ko:K02027 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2GNYN@201174,4D08X@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_00079 566552.BIFCAT_02007 4.3e-07 60.5 Bifidobacteriales ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2GMJG@201174,4D0BR@85004,COG1175@1,COG1175@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_00080 547043.BIFPSEUDO_02882 3.1e-167 594.3 Bifidobacteriales ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2GMJG@201174,4D0BR@85004,COG1175@1,COG1175@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_00081 547043.BIFPSEUDO_02880 6e-146 523.5 Bifidobacteriales ko:K02026 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2GJNN@201174,4D039@85004,COG0395@1,COG0395@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_00082 547043.BIFPSEUDO_02879 0.0 1352.8 Bifidobacteriales 3.2.1.185 ko:K09955,ko:K18205 ko00000,ko01000 GH127 Bacteria 2GM60@201174,4CYSU@85004,COG3533@1,COG3533@2 NA|NA|NA S Beta-L-arabinofuranosidase, GH127 KDBPDICH_00083 547043.BIFPSEUDO_02878 0.0 3507.6 Bifidobacteriales sca1 3.2.1.187 ko:K18206,ko:K21449 ko00000,ko01000,ko02000 1.B.40.2 GH121 Bacteria 2H8PD@201174,4D2YI@85004,COG1196@1,COG1196@2,COG3408@1,COG3408@2 NA|NA|NA DG Bacterial Ig-like domain (group 4) KDBPDICH_00084 547043.BIFPSEUDO_02877 0.0 2043.1 Bifidobacteriales Bacteria 2I911@201174,4D2SA@85004,COG3507@1,COG3507@2 NA|NA|NA G Bacterial Ig-like domain (group 4) KDBPDICH_00085 547043.BIFPSEUDO_02876 3.2e-208 730.7 Bifidobacteriales ugpQ 3.1.4.46 ko:K01126 ko00564,map00564 R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 Bacteria 2GNM5@201174,4CYS4@85004,COG0584@1,COG0584@2 NA|NA|NA C Glycerophosphoryl diester phosphodiesterase family KDBPDICH_00086 547043.BIFPSEUDO_02875 2.7e-117 427.9 Bifidobacteriales upp GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 ko:K00761 ko00240,ko01100,map00240,map01100 R00966 RC00063 ko00000,ko00001,ko01000 Bacteria 2GPJE@201174,4CYVS@85004,COG0035@1,COG0035@2 NA|NA|NA F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate KDBPDICH_00087 547043.BIFPSEUDO_02874 3.9e-91 341.3 Bifidobacteriales Bacteria 28MMU@1,2HAD5@201174,2ZAXG@2,4CZ1Q@85004 NA|NA|NA KDBPDICH_00088 547043.BIFPSEUDO_02873 4.5e-224 783.5 Bifidobacteriales mutT 3.6.1.13,3.6.1.55 ko:K01515,ko:K03574,ko:K08296 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000,ko03400 Bacteria 2GNRV@201174,4CZ90@85004,COG0494@1,COG0494@2,COG2062@1,COG2062@2 NA|NA|NA LT Phosphoglycerate mutase family KDBPDICH_00089 547043.BIFPSEUDO_02872 0.0 1466.4 Bifidobacteriales ppk 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 2GJ0B@201174,4CYXH@85004,COG0855@1,COG0855@2 NA|NA|NA P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) KDBPDICH_00091 547043.BIFPSEUDO_02870 5.5e-141 506.9 Bifidobacteriales cpaE GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 ko:K04562 ko00000,ko02035 Bacteria 2HZIH@201174,4D0JG@85004,COG0455@1,COG0455@2 NA|NA|NA D bacterial-type flagellum organization KDBPDICH_00092 547043.BIFPSEUDO_02869 2.7e-185 654.4 Bifidobacteriales cpaF ko:K02283 ko00000,ko02035,ko02044 Bacteria 2GKKJ@201174,4CZF2@85004,COG4962@1,COG4962@2 NA|NA|NA U Type II IV secretion system protein KDBPDICH_00093 547043.BIFPSEUDO_02868 1.4e-125 455.7 Bifidobacteriales ko:K12510 ko00000,ko02044 Bacteria 2GRXU@201174,4D1A3@85004,COG4965@1,COG4965@2 NA|NA|NA U Type ii secretion system KDBPDICH_00094 547043.BIFPSEUDO_02867 3.9e-90 337.4 Bifidobacteriales gspF ko:K12510,ko:K12511 ko00000,ko02044 Bacteria 2I2FP@201174,4D16W@85004,COG2064@1,COG2064@2 NA|NA|NA NU Type II secretion system (T2SS), protein F KDBPDICH_00095 547043.BIFPSEUDO_02865 1.3e-42 178.7 Bifidobacteriales Bacteria 2EHCF@1,2GR72@201174,33B4A@2,4D1FR@85004 NA|NA|NA S Protein of unknown function (DUF4244) KDBPDICH_00096 547043.BIFPSEUDO_02864 5.1e-60 236.9 Bifidobacteriales ko:K12513 ko00000,ko02044 Bacteria 2GT3N@201174,4D1E4@85004,COG4961@1,COG4961@2 NA|NA|NA U TadE-like protein KDBPDICH_00097 566552.BIFCAT_01987 4.7e-56 223.8 Bifidobacteriales Bacteria 2DRBM@1,2HZRZ@201174,33B4F@2,4D1G6@85004 NA|NA|NA S TIGRFAM helicase secretion neighborhood TadE-like protein KDBPDICH_00098 547043.BIFPSEUDO_02862 1.9e-214 751.5 Bifidobacteriales dagK GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.107 ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 R02240 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 2GK3P@201174,4CZ1S@85004,COG1597@1,COG1597@2 NA|NA|NA I Diacylglycerol kinase catalytic domain protein KDBPDICH_00099 547043.BIFPSEUDO_02861 1.6e-193 681.8 Bifidobacteriales Bacteria 28H6R@1,2I9RC@201174,2Z7J3@2,4CZ7J@85004 NA|NA|NA S Psort location CytoplasmicMembrane, score KDBPDICH_00100 547043.BIFPSEUDO_02860 1.1e-96 359.4 Bifidobacteriales Bacteria 2GND5@201174,4CZUU@85004,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family KDBPDICH_00101 547043.BIFPSEUDO_02859 0.0 1379.0 Bifidobacteriales dnaX GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0042575,GO:0042802,GO:0043170,GO:0043846,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050790,GO:0061695,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 2GJKA@201174,4CZMY@85004,COG2812@1,COG2812@2 NA|NA|NA L DNA polymerase III subunit gamma tau KDBPDICH_00102 566552.BIFCAT_01982 5e-105 387.1 Bifidobacteriales recR GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 2GJY0@201174,4CZRI@85004,COG0353@1,COG0353@2 NA|NA|NA L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO KDBPDICH_00103 547043.BIFPSEUDO_02856 3.4e-135 487.6 Bifidobacteriales ask GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0019877,GO:0030312,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 ko:K00928,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 Bacteria 2GN0G@201174,4CYSD@85004,COG0527@1,COG0527@2 NA|NA|NA E Amino acid kinase family KDBPDICH_00104 566552.BIFCAT_01979 1.4e-96 359.0 Bifidobacteriales askB 1.1.1.3,2.7.2.4 ko:K00928,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 Bacteria 2GN0G@201174,4D00P@85004,COG0527@1,COG0527@2 NA|NA|NA E ACT domain KDBPDICH_00105 547043.BIFPSEUDO_02854 1.8e-209 734.9 Bifidobacteriales asd GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016620,GO:0016903,GO:0030312,GO:0036094,GO:0040007,GO:0043891,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071944,GO:0097159,GO:1901265,GO:1901363 1.2.1.11,1.2.1.12 ko:K00133,ko:K00134 ko00010,ko00260,ko00261,ko00270,ko00300,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04066,ko05010,map00010,map00260,map00261,map00270,map00300,map00710,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04066,map05010 M00001,M00002,M00003,M00016,M00017,M00018,M00033,M00165,M00166,M00308,M00525,M00526,M00527,M00552 R01061,R02291 RC00149,RC00684 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 2GJJ8@201174,4CZPY@85004,COG0136@1,COG0136@2 NA|NA|NA E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate KDBPDICH_00106 547043.BIFPSEUDO_02853 2.4e-115 421.4 Bifidobacteriales Bacteria 2C7PT@1,2GM64@201174,2ZXN2@2,4CYPY@85004 NA|NA|NA KDBPDICH_00107 547043.BIFPSEUDO_02852 0.0 1096.6 Bifidobacteriales Bacteria 2GNKK@201174,4CZMC@85004,COG1409@1,COG1409@2 NA|NA|NA S Calcineurin-like phosphoesterase KDBPDICH_00108 547043.BIFPSEUDO_02851 0.0 1271.1 Bifidobacteriales leuA GO:0000287,GO:0003674,GO:0003824,GO:0003852,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016746,GO:0019752,GO:0030145,GO:0030955,GO:0031420,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046872,GO:0046912,GO:0046914,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 2GISX@201174,4CZYW@85004,COG0119@1,COG0119@2 NA|NA|NA E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) KDBPDICH_00109 547043.BIFPSEUDO_02850 0.0 1135.6 Bifidobacteriales 3.2.1.99 ko:K06113 ko00000,ko01000 GH43 Bacteria 2IECJ@201174,4D07X@85004,COG3507@1,COG3507@2 NA|NA|NA G C-terminal of Glycosyl hydrolases family 43 KDBPDICH_00110 401473.BDP_0236 3e-255 887.5 Bifidobacteriales 3.2.1.99 ko:K06113 ko00000,ko01000 GH43 Bacteria 2IECJ@201174,4CZF0@85004,COG3507@1,COG3507@2 NA|NA|NA G C-terminal of Glycosyl hydrolases family 43 KDBPDICH_00111 547043.BIFPSEUDO_02849 0.0 1404.4 Bifidobacteriales 3.2.1.97 ko:K17624 ko00000,ko01000 GH101 Bacteria 2GJJP@201174,4CZFV@85004,COG3940@1,COG3940@2 NA|NA|NA G Glycosyl hydrolases family 43 KDBPDICH_00112 547043.BIFPSEUDO_02847 5.4e-195 686.8 Bifidobacteriales Bacteria 2GJ5Q@201174,4D040@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_00113 547043.BIFPSEUDO_02845 1.7e-206 724.9 Bifidobacteriales abf Bacteria 2GJJP@201174,4CZVP@85004,COG3940@1,COG3940@2 NA|NA|NA G Glycosyl hydrolases family 43 KDBPDICH_00114 401473.BDP_0240 4.4e-294 1016.5 Bifidobacteriales ko:K17318 ko02010,map02010 M00603 ko00000,ko00001,ko00002,ko02000 3.A.1.1.29,3.A.1.1.9 Bacteria 2I8SG@201174,4D03G@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_00115 401473.BDP_0241 2.3e-168 598.2 Bifidobacteriales ko:K17319 ko02010,map02010 M00603 ko00000,ko00001,ko00002,ko02000 3.A.1.1.29,3.A.1.1.9 Bacteria 2GKSR@201174,4CZIC@85004,COG4209@1,COG4209@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_00116 401473.BDP_0242 8.3e-163 579.7 Bifidobacteriales ko:K02026,ko:K17320 ko02010,map02010 M00207,M00603 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.29,3.A.1.1.9 Bacteria 2GJPQ@201174,4CYTJ@85004,COG0395@1,COG0395@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_00117 401473.BDP_0243 1.1e-184 652.5 Bifidobacteriales Bacteria 2I4N1@201174,4D2X4@85004,COG1621@1,COG1621@2 NA|NA|NA G beta-fructofuranosidase activity KDBPDICH_00118 1435051.BMOU_0546 5e-101 374.0 Bifidobacteriales Bacteria 2H1AM@201174,4CYSQ@85004,COG5578@1,COG5578@2 NA|NA|NA S Protein of unknown function, DUF624 KDBPDICH_00119 547043.BIFPSEUDO_02839 8.4e-50 203.4 Bifidobacteriales ko:K09955 ko00000 Bacteria 2GM60@201174,4D08B@85004,COG3533@1,COG3533@2 NA|NA|NA S Beta-L-arabinofuranosidase, GH127 KDBPDICH_00120 547043.BIFPSEUDO_02837 0.0 1268.1 Bifidobacteriales mrcB 2.4.1.129,3.4.16.4 ko:K05365,ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 2GK21@201174,4CZQZ@85004,COG0744@1,COG0744@2 NA|NA|NA M Transglycosylase KDBPDICH_00121 547043.BIFPSEUDO_02836 2.7e-216 757.7 Bifidobacteriales ino1 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 R07324 RC01804 ko00000,ko00001,ko01000 Bacteria 2GKHB@201174,4D02Z@85004,COG1260@1,COG1260@2 NA|NA|NA I Myo-inositol-1-phosphate synthase KDBPDICH_00122 547043.BIFPSEUDO_02834 1.6e-237 828.2 Bifidobacteriales glf GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008767,GO:0009273,GO:0009987,GO:0016020,GO:0016853,GO:0016866,GO:0030312,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0071554,GO:0071766,GO:0071840,GO:0071944,GO:0097159,GO:1901265,GO:1901363 5.4.99.9 ko:K01854 ko00052,ko00520,map00052,map00520 R00505,R09009 RC00317,RC02396 ko00000,ko00001,ko01000 iNJ661.Rv3809c Bacteria 2GK2Z@201174,4CZ2W@85004,COG0562@1,COG0562@2 NA|NA|NA M UDP-galactopyranose mutase KDBPDICH_00123 547043.BIFPSEUDO_02833 4.8e-191 673.7 Bifidobacteriales 3.6.1.27 ko:K19302 ko00550,map00550 R05627 RC00002 ko00000,ko00001,ko01000,ko01011 Bacteria 2HIXE@201174,4CYS6@85004,COG0671@1,COG0671@2 NA|NA|NA I PAP2 superfamily KDBPDICH_00124 547043.BIFPSEUDO_02832 0.0 1929.5 Bifidobacteriales topA GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009892,GO:0010605,GO:0016020,GO:0016853,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0040007,GO:0043086,GO:0043167,GO:0043169,GO:0044092,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060700,GO:0060701,GO:0065007,GO:0065009,GO:0071944,GO:0080090,GO:0140097 5.99.1.2 ko:K03168 ko00000,ko01000,ko03032,ko03400 Bacteria 2GJU7@201174,4CZ85@85004,COG0550@1,COG0550@2,COG1754@1,COG1754@2 NA|NA|NA L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone KDBPDICH_00125 547043.BIFPSEUDO_02831 2.6e-115 421.4 Bifidobacteriales tmk GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 2GNTI@201174,4CYQ8@85004,COG0125@1,COG0125@2 NA|NA|NA F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis KDBPDICH_00126 547043.BIFPSEUDO_02830 1.1e-198 699.1 Bifidobacteriales holB GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 2GJ8C@201174,4CZ4Y@85004,COG0470@1,COG0470@2 NA|NA|NA L DNA polymerase III KDBPDICH_00127 547043.BIFPSEUDO_02829 2e-186 658.3 Bifidobacteriales ko:K02529 ko00000,ko03000 Bacteria 2GJRG@201174,4CZ05@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_00128 547043.BIFPSEUDO_02827 6e-39 166.4 Bifidobacteriales ptsH ko:K11189 ko00000,ko02000 4.A.2.1 Bacteria 2GQX6@201174,4D19B@85004,COG1925@1,COG1925@2 NA|NA|NA G PTS HPr component phosphorylation site KDBPDICH_00129 547043.BIFPSEUDO_02825 4.6e-286 989.9 Bifidobacteriales ptsI 2.7.3.9 ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 8.A.7 Bacteria 2GIZZ@201174,4CZ52@85004,COG1080@1,COG1080@2 NA|NA|NA G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) KDBPDICH_00130 547043.BIFPSEUDO_02824 1.1e-106 392.5 Bifidobacteriales ko:K06910 ko00000 Bacteria 2I5K1@201174,4CZSW@85004,COG1881@1,COG1881@2 NA|NA|NA S Phosphatidylethanolamine-binding protein KDBPDICH_00131 547043.BIFPSEUDO_02823 0.0 1082.8 Bifidobacteriales pepD ko:K08659 ko00000,ko01000,ko01002 Bacteria 2GM80@201174,4CZI5@85004,COG4690@1,COG4690@2 NA|NA|NA E Peptidase family C69 KDBPDICH_00132 547043.BIFPSEUDO_02822 9.1e-289 998.8 Bifidobacteriales fhs GO:0000096,GO:0000097,GO:0000105,GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006520,GO:0006547,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009108,GO:0009110,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0052803,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.5.1.5,3.5.4.9,6.3.4.3 ko:K00288,ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00141,M00377 R00943,R01220,R01655 RC00026,RC00111,RC00202,RC00578 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GT0X@201174,4CZ7P@85004,COG2759@1,COG2759@2 NA|NA|NA F Formate-tetrahydrofolate ligase KDBPDICH_00133 547043.BIFPSEUDO_02821 2.3e-62 244.6 Bifidobacteriales Bacteria 2II0W@201174,4D0VC@85004,COG1942@1,COG1942@2 NA|NA|NA S Macrophage migration inhibitory factor (MIF) KDBPDICH_00134 547043.BIFPSEUDO_02820 2.2e-96 358.2 Bifidobacteriales Bacteria 2HZBR@201174,4CZM6@85004,COG2246@1,COG2246@2 NA|NA|NA S GtrA-like protein KDBPDICH_00135 547043.BIFPSEUDO_02819 2.1e-263 914.4 Bifidobacteriales Bacteria 2GKMQ@201174,4CZ6D@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_00136 547043.BIFPSEUDO_02818 1.5e-123 448.7 Bifidobacteriales 3.1.3.3,3.1.3.73 ko:K02226,ko:K22305 ko00260,ko00680,ko00860,ko01100,ko01120,ko01130,map00260,map00680,map00860,map01100,map01120,map01130 M00122 R00582,R04594,R11173 RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 2GMXF@201174,4CZ0Z@85004,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family KDBPDICH_00137 547043.BIFPSEUDO_02816 7e-184 649.8 Bifidobacteriales Bacteria 2BR5C@1,2I8T9@201174,32K3E@2,4CZ8U@85004 NA|NA|NA KDBPDICH_00138 547043.BIFPSEUDO_02815 2.2e-100 372.9 Bifidobacteriales Bacteria 2IQHK@201174,4D0Q2@85004,COG3152@1,COG3152@2 NA|NA|NA S Protein of unknown function (DUF805) KDBPDICH_00139 547043.BIFPSEUDO_02813 5.5e-297 1026.2 Bifidobacteriales gltX GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.1.1.17 ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 iNJ661.Rv2992c Bacteria 2GJJS@201174,4CZHK@85004,COG0008@1,COG0008@2 NA|NA|NA J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) KDBPDICH_00142 547043.BIFPSEUDO_02810 1.8e-268 931.4 Bifidobacteriales Bacteria 2HRDZ@201174,4CYQR@85004,COG1409@1,COG1409@2 NA|NA|NA S Calcineurin-like phosphoesterase KDBPDICH_00143 547043.BIFPSEUDO_02809 1.6e-138 498.8 Bifidobacteriales ltbR Bacteria 2GKB0@201174,4CZ9D@85004,COG1414@1,COG1414@2 NA|NA|NA K Transcriptional regulator, IclR family, C-terminal domain protein KDBPDICH_00144 547043.BIFPSEUDO_02807 7.1e-272 942.6 Bifidobacteriales leuC GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 iEcE24377_1341.EcE24377A_0075,iPC815.YPO0531 Bacteria 2GKT7@201174,4CYUC@85004,COG0065@1,COG0065@2 NA|NA|NA E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate KDBPDICH_00145 547043.BIFPSEUDO_02806 1.3e-131 475.7 Bifidobacteriales leuD GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016020,GO:0016053,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 iNJ661.Rv2987c Bacteria 2GJ8Z@201174,4CZ2F@85004,COG0066@1,COG0066@2 NA|NA|NA E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate KDBPDICH_00146 547043.BIFPSEUDO_02804 3.6e-200 704.1 Bifidobacteriales pyrD 1.3.1.14,1.3.98.1 ko:K00226,ko:K02823,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJMN@201174,4CZKM@85004,COG0167@1,COG0167@2 NA|NA|NA F Dihydroorotate dehydrogenase KDBPDICH_00147 566552.BIFCAT_01708 1e-256 892.1 Bifidobacteriales murA 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 R00660 RC00350 ko00000,ko00001,ko01000,ko01011 Bacteria 2GJPW@201174,4CZN7@85004,COG0766@1,COG0766@2 NA|NA|NA M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine KDBPDICH_00148 547043.BIFPSEUDO_02801 2.3e-175 621.3 Bifidobacteriales plsC2 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 2GKVA@201174,4CZG0@85004,COG0204@1,COG0204@2 NA|NA|NA I Phosphate acyltransferases KDBPDICH_00149 547043.BIFPSEUDO_02800 1.7e-179 635.2 Bifidobacteriales gpsA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 R00842,R00844 RC00029 ko00000,ko00001,ko01000 Bacteria 2GJSD@201174,4CZHP@85004,COG0240@1,COG0240@2 NA|NA|NA I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KDBPDICH_00150 566552.BIFCAT_01704 7.1e-217 759.6 Bifidobacteriales ddl GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008716,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016874,GO:0016879,GO:0016881,GO:0044424,GO:0044444,GO:0044464,GO:0050896 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iAF1260.b0381,iB21_1397.B21_00332,iBWG_1329.BWG_0265,iE2348C_1286.E2348C_0317,iEC042_1314.EC042_0413,iEC55989_1330.EC55989_0386,iECBD_1354.ECBD_3283,iECB_1328.ECB_00328,iECDH10B_1368.ECDH10B_0338,iECDH1ME8569_1439.ECDH1ME8569_0367,iECD_1391.ECD_00328,iECH74115_1262.ECH74115_0453,iECIAI1_1343.ECIAI1_0377,iECIAI39_1322.ECIAI39_0301,iECO103_1326.ECO103_0356,iECO111_1330.ECO111_0411,iECO26_1355.ECO26_0414,iECSE_1348.ECSE_0401,iECSP_1301.ECSP_0441,iECs_1301.ECs0431,iETEC_1333.ETEC_0434,iEcDH1_1363.EcDH1_3227,iEcE24377_1341.EcE24377A_0406,iEcHS_1320.EcHS_A0447,iEcSMS35_1347.EcSMS35_0410,iEcolC_1368.EcolC_3251,iJO1366.b0381,iJR904.b0381,iSF_1195.SF0232,iSFxv_1172.SFxv_0245,iS_1188.S0254,iUMNK88_1353.UMNK88_429,iY75_1357.Y75_RS01965,iZ_1308.Z0477 Bacteria 2GITC@201174,4CZ1R@85004,COG1181@1,COG1181@2 NA|NA|NA F Belongs to the D-alanine--D-alanine ligase family KDBPDICH_00151 547043.BIFPSEUDO_02798 5.8e-219 766.5 Bifidobacteriales ko:K02055 ko02024,map02024 M00193 ko00000,ko00001,ko00002,ko02000 3.A.1.11 Bacteria 2GJFH@201174,4CZHC@85004,COG1840@1,COG1840@2 NA|NA|NA P Bacterial extracellular solute-binding protein KDBPDICH_00152 547043.BIFPSEUDO_02797 2.1e-158 565.1 Bifidobacteriales ko:K02054 ko02024,map02024 M00193 ko00000,ko00001,ko00002,ko02000 3.A.1.11 Bacteria 2GNDF@201174,4CZHE@85004,COG4132@1,COG4132@2 NA|NA|NA U Binding-protein-dependent transport system inner membrane component KDBPDICH_00153 547043.BIFPSEUDO_02796 6.2e-141 506.9 Bifidobacteriales ko:K02053 ko02024,map02024 M00193 ko00000,ko00001,ko00002,ko02000 3.A.1.11 Bacteria 2GM0E@201174,4CZ2N@85004,COG1177@1,COG1177@2 NA|NA|NA U Binding-protein-dependent transport system inner membrane component KDBPDICH_00154 547043.BIFPSEUDO_02795 2.6e-214 751.1 Bifidobacteriales 3.6.3.30 ko:K02010,ko:K02052 ko02010,ko02024,map02010,map02024 M00190,M00193 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.10,3.A.1.11 Bacteria 2GJCM@201174,4CZPE@85004,COG3842@1,COG3842@2 NA|NA|NA E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system KDBPDICH_00155 547043.BIFPSEUDO_02794 2.6e-180 638.3 Bifidobacteriales Bacteria 2I3DW@201174,4CZJZ@85004,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity KDBPDICH_00156 547043.BIFPSEUDO_02793 1.7e-137 495.4 Bifidobacteriales Bacteria 2GZI1@201174,4CZ0A@85004,COG0668@1,COG0668@2 NA|NA|NA M Mechanosensitive ion channel KDBPDICH_00157 547043.BIFPSEUDO_02792 5.9e-230 803.1 Bifidobacteriales MA20_36090 Bacteria 2GMT6@201174,4CZ4Q@85004,COG1073@1,COG1073@2 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00158 547043.BIFPSEUDO_02791 2.4e-228 797.7 Bifidobacteriales MA20_36090 Bacteria 2GMT6@201174,4CZ4Q@85004,COG1073@1,COG1073@2 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00159 547043.BIFPSEUDO_02790 6.3e-125 453.4 Bifidobacteriales Bacteria 2I8SX@201174,4CZXQ@85004,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family KDBPDICH_00160 547043.BIFPSEUDO_02789 1.4e-231 808.5 Bifidobacteriales yhdR 2.6.1.1 ko:K11358 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 Bacteria 2GPM3@201174,4CZ6T@85004,COG0436@1,COG0436@2 NA|NA|NA E Psort location Cytoplasmic, score 8.87 KDBPDICH_00161 1435051.BMOU_1584 2.8e-83 314.7 Bifidobacteriales gntK 2.7.1.12 ko:K00851 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 R01737 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 2GMW2@201174,4D0QX@85004,COG3265@1,COG3265@2 NA|NA|NA F Shikimate kinase KDBPDICH_00162 547043.BIFPSEUDO_02783 1.1e-125 456.1 Bifidobacteriales gntR ko:K19776 ko00000,ko03000 Bacteria 2GKBM@201174,4CYZS@85004,COG2186@1,COG2186@2 NA|NA|NA K FCD KDBPDICH_00163 547043.BIFPSEUDO_02781 1.6e-228 798.5 Bifidobacteriales yxiO ko:K06902 ko04138,map04138 ko00000,ko00001,ko02000,ko04131 2.A.1.24,9.A.15.1 Bacteria 2GJCW@201174,4CZU3@85004,COG2270@1,COG2270@2 NA|NA|NA S Vacuole effluxer Atg22 like KDBPDICH_00164 547043.BIFPSEUDO_02780 0.0 1329.7 Bifidobacteriales Bacteria 2I8FI@201174,4CZDI@85004,COG0457@1,COG0457@2 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00165 1680.BADO_0211 8.4e-30 135.6 Bifidobacteriales rpmB GO:0003674,GO:0003735,GO:0005198 ko:K02902 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GQNU@201174,4D17Q@85004,COG0227@1,COG0227@2 NA|NA|NA J Ribosomal L28 family KDBPDICH_00166 547043.BIFPSEUDO_02778 0.0 1691.8 Bifidobacteriales recG GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 2GKA3@201174,4CYTV@85004,COG1200@1,COG1200@2 NA|NA|NA L helicase superfamily c-terminal domain KDBPDICH_00167 547043.BIFPSEUDO_02777 6.5e-105 386.7 Bifidobacteriales rsmD 2.1.1.171 ko:K08316 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 2GQ3G@201174,4D0GU@85004,COG0742@1,COG0742@2 NA|NA|NA L Conserved hypothetical protein 95 KDBPDICH_00168 547043.BIFPSEUDO_02776 3.6e-152 544.3 Bifidobacteriales trmD GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 ko:K00554,ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R00597,R05637 RC00002,RC00003,RC00334,RC01440 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 2GJ1G@201174,4CZ7A@85004,COG0336@1,COG0336@2 NA|NA|NA J Belongs to the RNA methyltransferase TrmD family KDBPDICH_00169 547043.BIFPSEUDO_02775 3.6e-108 397.5 Bifidobacteriales rimM GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 ko:K02860 ko00000,ko03009 Bacteria 2GK4I@201174,4D0C6@85004,COG0806@1,COG0806@2 NA|NA|NA J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes KDBPDICH_00170 1435051.BMOU_1596 1.8e-34 151.4 Bifidobacteriales CP_0960 GO:0008150,GO:0040007 ko:K06960 ko00000 Bacteria 2IQ4C@201174,4D16Z@85004,COG1837@1,COG1837@2 NA|NA|NA S Belongs to the UPF0109 family KDBPDICH_00171 547043.BIFPSEUDO_02773 3.9e-54 217.6 Bifidobacteriales rpsP GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02959 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 2IKU0@201174,4D0PE@85004,COG0228@1,COG0228@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bS16 family KDBPDICH_00172 547043.BIFPSEUDO_02771 4e-179 634.0 Bifidobacteriales Bacteria 2GK2H@201174,4CYS3@85004,COG3021@1,COG3021@2 NA|NA|NA S Endonuclease/Exonuclease/phosphatase family KDBPDICH_00173 547043.BIFPSEUDO_02770 2.7e-270 937.6 Bifidobacteriales ffh GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0040007,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 Bacteria 2GK4R@201174,4CYY1@85004,COG0541@1,COG0541@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY KDBPDICH_00174 547043.BIFPSEUDO_02769 2.5e-295 1020.8 Bifidobacteriales cysS GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 ko:K01883 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GJF2@201174,4CZZ9@85004,COG0215@1,COG0215@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family KDBPDICH_00175 547043.BIFPSEUDO_02768 1.9e-152 545.0 Bifidobacteriales guaA1 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 2GNA6@201174,4CYR4@85004,COG0518@1,COG0518@2 NA|NA|NA F Peptidase C26 KDBPDICH_00176 547043.BIFPSEUDO_02767 0.0 1248.4 Bifidobacteriales yjjK ko:K15738 ko00000,ko02000 3.A.1.120.6 Bacteria 2GJ5M@201174,4CZCU@85004,COG0488@1,COG0488@2 NA|NA|NA S ABC transporter KDBPDICH_00177 547043.BIFPSEUDO_02766 6.4e-96 356.7 Bifidobacteriales Bacteria 2AR06@1,2IF1Q@201174,31G8Z@2,4D090@85004 NA|NA|NA KDBPDICH_00178 547043.BIFPSEUDO_02765 5.7e-92 343.6 Bifidobacteriales ilvN GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0030312,GO:0032991,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 iECO103_1326.ilvN,iJN678.ilvN Bacteria 2GJCH@201174,4CYXX@85004,COG0440@1,COG0440@2 NA|NA|NA E ACT domain KDBPDICH_00179 547043.BIFPSEUDO_02764 0.0 1272.7 Bifidobacteriales ilvB 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKU4@201174,4CYR0@85004,COG0028@1,COG0028@2 NA|NA|NA H Thiamine pyrophosphate enzyme, central domain KDBPDICH_00180 547043.BIFPSEUDO_02762 5.7e-136 490.3 Bifidobacteriales rnc GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Bacteria 2GKER@201174,4CZ98@85004,COG0571@1,COG0571@2 NA|NA|NA J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism KDBPDICH_00181 547043.BIFPSEUDO_02761 1e-19 102.1 Bifidobacteriales rpmF GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 ko:K02911 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 2GQP3@201174,4D18N@85004,COG0333@1,COG0333@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL32 family KDBPDICH_00182 547043.BIFPSEUDO_02760 1.8e-113 415.2 Bifidobacteriales yceD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 ko:K07040 ko00000 Bacteria 2GJTS@201174,4CZ0J@85004,COG1399@1,COG1399@2 NA|NA|NA S Uncharacterized ACR, COG1399 KDBPDICH_00183 547043.BIFPSEUDO_02759 8.5e-134 483.0 Bifidobacteriales Bacteria 2EKTZ@1,2HZD3@201174,33EHP@2,4CZV9@85004 NA|NA|NA KDBPDICH_00184 547043.BIFPSEUDO_02758 7.7e-88 329.7 Bifidobacteriales coaD 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 2GN1S@201174,4CYR5@85004,COG0669@1,COG0669@2 NA|NA|NA H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate KDBPDICH_00185 547043.BIFPSEUDO_02757 7.2e-58 229.6 Bifidobacteriales Bacteria 2CAFG@1,2I800@201174,32ZDZ@2,4D107@85004 NA|NA|NA S Protein of unknown function (DUF3039) KDBPDICH_00186 547043.BIFPSEUDO_02756 2.5e-194 684.5 Bifidobacteriales yghZ ko:K19265 ko00000,ko01000 Bacteria 2GMT5@201174,4CZ25@85004,COG0667@1,COG0667@2 NA|NA|NA C Aldo/keto reductase family KDBPDICH_00187 547043.BIFPSEUDO_02755 1.1e-77 295.8 Bifidobacteriales soxR Bacteria 2HZMI@201174,4D0Y1@85004,COG0789@1,COG0789@2 NA|NA|NA K MerR, DNA binding KDBPDICH_00188 547043.BIFPSEUDO_02752 1e-119 436.0 Bifidobacteriales rdgB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66,5.1.1.3 ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 R00260,R00426,R00720,R01855,R02100,R02720,R03531 RC00002,RC00302 ko00000,ko00001,ko01000,ko01011 Bacteria 2GM2B@201174,4CZ3F@85004,COG0127@1,COG0127@2 NA|NA|NA F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions KDBPDICH_00189 566552.BIFCAT_01659 1.9e-138 498.4 Bifidobacteriales rph GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56,3.6.1.66 ko:K00989,ko:K02428 ko00230,map00230 R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000,ko03016 Bacteria 2GJFI@201174,4CZBF@85004,COG0689@1,COG0689@2 NA|NA|NA J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates KDBPDICH_00190 547043.BIFPSEUDO_02749 1.7e-251 874.8 Bifidobacteriales pncB GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0030312,GO:0034355,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 ko:K00763 ko00760,ko01100,map00760,map01100 R01724 RC00033 ko00000,ko00001,ko01000 Bacteria 2GJAT@201174,4CYUR@85004,COG1488@1,COG1488@2 NA|NA|NA F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP KDBPDICH_00191 547043.BIFPSEUDO_02748 3e-237 827.4 Bifidobacteriales murN 2.3.2.16 ko:K11693,ko:K12554 ko00550,ko01100,map00550,map01100 R08776,R08780 RC00055,RC00064,RC00096 ko00000,ko00001,ko01000,ko01011 Bacteria 2HZ91@201174,4CYZJ@85004,COG2348@1,COG2348@2 NA|NA|NA V Psort location Cytoplasmic, score 8.87 KDBPDICH_00192 547043.BIFPSEUDO_02747 1.4e-218 765.4 Bifidobacteriales murN 2.3.2.16 ko:K11693,ko:K12554 ko00550,ko01100,map00550,map01100 R08776,R08780 RC00055,RC00064,RC00096 ko00000,ko00001,ko01000,ko01011 Bacteria 2HZ91@201174,4CYZJ@85004,COG2348@1,COG2348@2 NA|NA|NA V Psort location Cytoplasmic, score 8.87 KDBPDICH_00195 566552.BIFCAT_01652 1.3e-174 619.0 Bifidobacteriales ko:K07088 ko00000 Bacteria 2GN0R@201174,4CZ6C@85004,COG0679@1,COG0679@2 NA|NA|NA S Auxin Efflux Carrier KDBPDICH_00196 566552.BIFCAT_01651 0.0 1143.3 Bifidobacteriales pgi GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 M00001,M00004,M00114 R02739,R02740,R03321 RC00376,RC00563 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GJG0@201174,4CYVV@85004,COG0166@1,COG0166@2 NA|NA|NA G Belongs to the GPI family KDBPDICH_00197 566552.BIFCAT_01649 3e-60 237.7 Bifidobacteriales rplS GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02884 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IHRT@201174,4D0V2@85004,COG0335@1,COG0335@2 NA|NA|NA J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site KDBPDICH_00198 566552.BIFCAT_01648 1.7e-122 445.3 Bifidobacteriales lepB GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 2GIYN@201174,4CZEY@85004,COG0681@1,COG0681@2 NA|NA|NA U Belongs to the peptidase S26 family KDBPDICH_00199 566552.BIFCAT_01647 1e-126 459.5 Bifidobacteriales rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 2GJFN@201174,4CZ1U@85004,COG0164@1,COG0164@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids KDBPDICH_00200 566552.BIFCAT_01646 2.3e-128 464.9 Bifidobacteriales ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GM25@201174,4D0FV@85004,COG1136@1,COG1136@2 NA|NA|NA V ATPases associated with a variety of cellular activities KDBPDICH_00201 566552.BIFCAT_01645 9.4e-270 935.6 Bifidobacteriales ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GKF3@201174,4D03X@85004,COG0577@1,COG0577@2 NA|NA|NA V Efflux ABC transporter, permease protein KDBPDICH_00202 566552.BIFCAT_01644 2.7e-166 591.3 Bifidobacteriales mdcF ko:K07088 ko00000 Bacteria 2GNIA@201174,4CZFX@85004,COG0679@1,COG0679@2 NA|NA|NA S Transporter, auxin efflux carrier (AEC) family protein KDBPDICH_00203 566552.BIFCAT_01643 1.2e-230 805.4 Bifidobacteriales dapE 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria 2GK09@201174,4CZ9K@85004,COG0624@1,COG0624@2 NA|NA|NA E Peptidase dimerisation domain KDBPDICH_00204 1435051.BMOU_1626 2.6e-305 1054.7 Bifidobacteriales rne GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 3.1.26.12 ko:K08300,ko:K08301 ko03018,map03018 M00394 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Bacteria 2GMM5@201174,4CYQT@85004,COG1530@1,COG1530@2 NA|NA|NA J Ribonuclease E/G family KDBPDICH_00205 547043.BIFPSEUDO_02728 2.4e-47 194.5 Bifidobacteriales rplU GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02888 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IQ9A@201174,4D10B@85004,COG0261@1,COG0261@2 NA|NA|NA J This protein binds to 23S rRNA in the presence of protein L20 KDBPDICH_00206 1435051.BMOU_1628 2.6e-39 167.5 Bifidobacteriales rpmA GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 ko:K02899 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IQDI@201174,4D19N@85004,COG0211@1,COG0211@2 NA|NA|NA J Ribosomal L27 protein KDBPDICH_00207 566552.BIFCAT_01638 2.3e-311 1074.7 Bifidobacteriales obg GO:0000287,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019538,GO:0032991,GO:0036211,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046777,GO:0046872,GO:0071704,GO:0071944,GO:1901564,GO:1990904 ko:K03979 ko00000,ko01000,ko03009 Bacteria 2GISB@201174,4CYWD@85004,COG0536@1,COG0536@2 NA|NA|NA S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control KDBPDICH_00208 566552.BIFCAT_01637 4.7e-205 720.3 Bifidobacteriales proB GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 M00015 R00239 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 Bacteria 2GM8U@201174,4CZ2B@85004,COG0263@1,COG0263@2 NA|NA|NA E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate KDBPDICH_00209 566552.BIFCAT_01636 6.3e-232 809.7 Bifidobacteriales aspC Bacteria 2GJ7R@201174,4CZFY@85004,COG0436@1,COG0436@2 NA|NA|NA E DegT/DnrJ/EryC1/StrS aminotransferase family KDBPDICH_00211 547043.BIFPSEUDO_02722 1.2e-32 145.2 Bifidobacteriales secE GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 2HZQC@201174,4D18K@85004,COG0690@1,COG0690@2 NA|NA|NA U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation KDBPDICH_00212 547043.BIFPSEUDO_02721 2.9e-129 468.0 Bifidobacteriales nusG GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030312,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 ko:K02601 ko00000,ko03009,ko03021 Bacteria 2GJFW@201174,4CYSH@85004,COG0250@1,COG0250@2 NA|NA|NA K Participates in transcription elongation, termination and antitermination KDBPDICH_00213 547043.BIFPSEUDO_02720 2.3e-72 278.1 Bifidobacteriales rplK GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0015968,GO:0016043,GO:0019538,GO:0019843,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0032984,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02867 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IFCK@201174,4D0PA@85004,COG0080@1,COG0080@2 NA|NA|NA J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors KDBPDICH_00214 547043.BIFPSEUDO_02719 3e-122 444.5 Bifidobacteriales rplA GO:0000027,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045947,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02863 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GM51@201174,4CZFR@85004,COG0081@1,COG0081@2 NA|NA|NA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release KDBPDICH_00215 547043.BIFPSEUDO_02718 5.9e-143 513.5 Bifidobacteriales Bacteria 2GN0S@201174,4CYXU@85004,COG2508@1,COG2508@2 NA|NA|NA QT PucR C-terminal helix-turn-helix domain KDBPDICH_00216 547043.BIFPSEUDO_02717 0.0 1444.1 Bifidobacteriales Bacteria 2DX0J@1,2H683@201174,342TV@2,4CZAG@85004 NA|NA|NA KDBPDICH_00217 547043.BIFPSEUDO_02716 1.3e-162 578.9 Bifidobacteriales birA GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 2.7.1.33,6.3.4.15 ko:K01947,ko:K03524 ko00770,ko00780,ko01100,map00770,map00780,map01100 M00120 R01074,R02971,R03018,R04391,R05145 RC00002,RC00017,RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 2GN8Q@201174,4D0R8@85004,COG0340@1,COG0340@2 NA|NA|NA H Biotin/lipoate A/B protein ligase family KDBPDICH_00218 547043.BIFPSEUDO_02715 2.1e-79 302.0 Bifidobacteriales bioY GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03523 ko02010,map02010 M00581,M00582 ko00000,ko00001,ko00002,ko02000 2.A.88.1,2.A.88.2 Bacteria 2GJ53@201174,4D0BB@85004,COG1268@1,COG1268@2 NA|NA|NA S BioY family KDBPDICH_00219 547043.BIFPSEUDO_02714 0.0 1247.6 Bifidobacteriales accA 6.3.4.14,6.4.1.2,6.4.1.3 ko:K11263 ko00061,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00741 R00742,R01859,R04385 RC00040,RC00097,RC00253,RC00367,RC00609 ko00000,ko00001,ko00002,ko01000 Bacteria 2GIZP@201174,4CYU4@85004,COG4770@1,COG4770@2 NA|NA|NA I Carbamoyl-phosphate synthase L chain, ATP binding domain protein KDBPDICH_00220 547043.BIFPSEUDO_02713 0.0 1076.6 Bifidobacteriales pccB Bacteria 2GIRU@201174,4CYSI@85004,COG4799@1,COG4799@2 NA|NA|NA I Carboxyl transferase domain KDBPDICH_00221 547043.BIFPSEUDO_02712 0.0 5825.7 Bifidobacteriales fas 2.3.1.179 ko:K09458,ko:K11533 ko00061,ko00780,ko01100,ko01212,ko04931,map00061,map00780,map01100,map01212,map04931 M00082,M00083,M00572 R01624,R01626,R04355,R04428,R04429,R04533,R04534,R04535,R04536,R04537,R04543,R04544,R04566,R04568,R04724,R04726,R04952,R04953,R04954,R04955,R04957,R04958,R04960,R04961,R04963,R04964,R04965,R04966,R04968,R04969,R07762,R07763,R07764,R07765,R10115,R10119,R10700 RC00004,RC00029,RC00039,RC00052,RC00076,RC00117,RC00831,RC01095,RC02727,RC02728,RC02729,RC02857,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 2GIY4@201174,4CYXJ@85004,COG0304@1,COG0304@2,COG0331@1,COG0331@2,COG2030@1,COG2030@2,COG4981@1,COG4981@2 NA|NA|NA I Beta-ketoacyl synthase, C-terminal domain KDBPDICH_00223 547043.BIFPSEUDO_02710 1.2e-82 312.4 Bifidobacteriales acpS GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.7.8.7,3.2.1.52 ko:K00997,ko:K01207 ko00520,ko00531,ko00770,ko01100,ko01501,map00520,map00531,map00770,map01100,map01501 M00628 R00022,R01625,R05963,R07809,R07810,R10831 RC00002,RC00049 ko00000,ko00001,ko00002,ko01000 Bacteria 2HZNB@201174,4D10J@85004,COG0736@1,COG0736@2 NA|NA|NA I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein KDBPDICH_00224 547043.BIFPSEUDO_02708 0.0 1243.8 Bifidobacteriales ams 2.4.1.4,3.2.1.1,5.4.99.16 ko:K05341,ko:K05343 ko00500,ko01100,map00500,map01100 R01557,R01823,R02108,R02112,R11262 RC00028,RC01816 ko00000,ko00001,ko01000 GH13 Bacteria 2GKT9@201174,4CYRW@85004,COG0366@1,COG0366@2 NA|NA|NA G Alpha amylase, catalytic domain KDBPDICH_00226 547043.BIFPSEUDO_02706 2.4e-116 424.9 Bifidobacteriales Bacteria 2B37S@1,2IDBE@201174,31VVT@2,4CZJV@85004 NA|NA|NA KDBPDICH_00227 1435051.BMOU_1646 1.7e-41 174.9 Bifidobacteriales rpsO GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02956 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IQA0@201174,4D10E@85004,COG0184@1,COG0184@2 NA|NA|NA J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome KDBPDICH_00228 547043.BIFPSEUDO_02704 0.0 1302.3 Bifidobacteriales pnp GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Bacteria 2GIT2@201174,4CYSW@85004,COG1185@1,COG1185@2 NA|NA|NA J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction KDBPDICH_00229 547043.BIFPSEUDO_03247 0.0 1090.1 Bifidobacteriales rfbP Bacteria 2GK0M@201174,4CZ4J@85004,COG2148@1,COG2148@2 NA|NA|NA M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase KDBPDICH_00230 547043.BIFPSEUDO_03246 0.0 1116.7 Bifidobacteriales 2.1.1.107,2.1.1.294,2.7.1.181,2.7.11.1 ko:K02496,ko:K05802,ko:K08884,ko:K18827 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R03194,R10657,R10658 RC00002,RC00003,RC00078,RC00871,RC03220 ko00000,ko00001,ko00002,ko01000,ko01001,ko01005,ko02000 1.A.23.1.1 Bacteria 2I2HI@201174,4CYVN@85004,COG2959@1,COG2959@2 NA|NA|NA H Protein of unknown function (DUF4012) KDBPDICH_00231 547043.BIFPSEUDO_03245 3.2e-189 667.5 Bifidobacteriales Bacteria 2GKXC@201174,4CZVK@85004,COG3021@1,COG3021@2 NA|NA|NA S Endonuclease/Exonuclease/phosphatase family KDBPDICH_00232 547043.BIFPSEUDO_03244 2.5e-47 194.5 Bifidobacteriales Bacteria 2AVIH@1,2IMY2@201174,31MB1@2,4D12K@85004 NA|NA|NA KDBPDICH_00233 547043.BIFPSEUDO_03243 2.3e-284 984.2 Bifidobacteriales Bacteria 2GIZX@201174,4CZWX@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_00234 547043.BIFPSEUDO_03242 1.4e-242 845.1 Bifidobacteriales Bacteria 2HZW6@201174,4D20A@85004,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase (GGDEF) domain protein KDBPDICH_00235 547043.BIFPSEUDO_03241 2.1e-116 425.2 Bifidobacteriales Bacteria 2GJ38@201174,4CZCY@85004,COG2356@1,COG2356@2 NA|NA|NA L Protein of unknown function (DUF1524) KDBPDICH_00236 547043.BIFPSEUDO_03240 9.3e-166 589.3 Bifidobacteriales dkgA GO:0003674,GO:0003824,GO:0004033,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008106,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0042180,GO:0042182,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0051596,GO:0055114,GO:0071704,GO:1901575 1.1.1.346 ko:K06221 R08878 RC00089 ko00000,ko01000 iECH74115_1262.ECH74115_4323,iECSP_1301.ECSP_3988 Bacteria 2GJQ7@201174,4CYUN@85004,COG0656@1,COG0656@2 NA|NA|NA S Oxidoreductase, aldo keto reductase family protein KDBPDICH_00237 547043.BIFPSEUDO_03238 1.8e-240 838.2 Bifidobacteriales mntH GO:0000041,GO:0003674,GO:0005215,GO:0005384,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006826,GO:0006828,GO:0006829,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015075,GO:0015077,GO:0015078,GO:0015086,GO:0015291,GO:0015292,GO:0015293,GO:0015318,GO:0015672,GO:0015684,GO:0015691,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0034755,GO:0042221,GO:0044425,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070574,GO:0070838,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071421,GO:0071577,GO:0071578,GO:0071944,GO:0072511,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098739,GO:0099587,GO:1902600 ko:K03322 ko00000,ko02000 2.A.55.2.6,2.A.55.3 iSF_1195.SF2457,iYO844.BSU04360 Bacteria 2GJSM@201174,4CZZB@85004,COG1914@1,COG1914@2 NA|NA|NA P H( )-stimulated, divalent metal cation uptake system KDBPDICH_00238 547043.BIFPSEUDO_03236 3.8e-196 690.6 Bifidobacteriales Bacteria 2GJ5Q@201174,4D040@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_00239 547043.BIFPSEUDO_03235 0.0 1462.6 Bifidobacteriales bga1 3.2.1.23 ko:K12308 ko00052,map00052 R01105 RC00452 ko00000,ko00001,ko01000 Bacteria 2GMDT@201174,4CZ38@85004,COG1874@1,COG1874@2 NA|NA|NA G Psort location Cytoplasmic, score 8.87 KDBPDICH_00240 547043.BIFPSEUDO_02421 9.1e-168 596.3 Bifidobacteriales ko:K02026 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2GJPZ@201174,4CYV5@85004,COG0395@1,COG0395@2 NA|NA|NA G ABC transporter permease KDBPDICH_00241 547043.BIFPSEUDO_02422 1.3e-155 555.8 Bifidobacteriales ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2GMTW@201174,4CZX2@85004,COG1175@1,COG1175@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_00242 547043.BIFPSEUDO_04256 2e-239 834.7 Bifidobacteriales ko:K02027 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2GJIP@201174,4CZU2@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_00243 547043.BIFPSEUDO_04255 3e-128 464.5 Bifidobacteriales pdxT GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0008614,GO:0009058,GO:0009108,GO:0009110,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0071496,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902494,GO:1903600 4.3.3.6 ko:K08681 ko00750,map00750 R07456 RC00010,RC01783,RC03043 ko00000,ko00001,ko01000 iHN637.CLJU_RS19495 Bacteria 2GNYG@201174,4CYUS@85004,COG0311@1,COG0311@2 NA|NA|NA H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS KDBPDICH_00244 547043.BIFPSEUDO_04254 4e-156 557.4 Bifidobacteriales pdxS GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0040007,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.3.3.6 ko:K06215 ko00750,map00750 R07456 RC00010,RC01783,RC03043 ko00000,ko00001,ko01000 Bacteria 2GK1T@201174,4CZ5P@85004,COG0214@1,COG0214@2 NA|NA|NA H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively KDBPDICH_00245 547043.BIFPSEUDO_04251 0.0 2294.2 Bifidobacteriales cydD GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 ko:K06147,ko:K06148,ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.129,3.A.1.21 Bacteria 2GITR@201174,4CYSB@85004,COG1132@1,COG1132@2,COG4988@1,COG4988@2 NA|NA|NA V ABC transporter transmembrane region KDBPDICH_00246 547043.BIFPSEUDO_04249 0.0 1196.0 Bifidobacteriales fadD 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 Bacteria 2GIXQ@201174,4CZZP@85004,COG1022@1,COG1022@2 NA|NA|NA I AMP-binding enzyme KDBPDICH_00247 547043.BIFPSEUDO_04248 4.1e-297 1026.5 Bifidobacteriales araA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008733,GO:0009056,GO:0009058,GO:0009987,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0019566,GO:0019568,GO:0019569,GO:0019572,GO:0019637,GO:0044237,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046373,GO:0051167,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901159,GO:1901575,GO:1901576 5.3.1.4 ko:K01804 ko00040,ko01100,map00040,map01100 R01761 RC00516 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_1922,iB21_1397.B21_00063,iBWG_1329.BWG_0058,iE2348C_1286.E2348C_0063,iECBD_1354.ECBD_3555,iECD_1391.ECD_00064,iECED1_1282.ECED1_0061,iECIAI1_1343.ECIAI1_0062,iECNA114_1301.ECNA114_0050,iECO103_1326.ECO103_0063,iECO26_1355.ECO26_0064,iECOK1_1307.ECOK1_0061,iECP_1309.ECP_0063,iECS88_1305.ECS88_0065,iECSE_1348.ECSE_0062,iECW_1372.ECW_m0060,iEKO11_1354.EKO11_3852,iEcE24377_1341.EcE24377A_0064,iEcHS_1320.EcHS_A0066,iEcSMS35_1347.EcSMS35_0064,iEcolC_1368.EcolC_3595,iLF82_1304.LF82_0105,iLJ478.TM0276,iNRG857_1313.NRG857_00320,iSBO_1134.SBO_0049,iSSON_1240.SSON_0068,iUMN146_1321.UM146_23095,iUTI89_1310.UTI89_C0067,iWFL_1372.ECW_m0060 Bacteria 2GJNB@201174,4CZH6@85004,COG2160@1,COG2160@2 NA|NA|NA G Catalyzes the conversion of L-arabinose to L-ribulose KDBPDICH_00248 547043.BIFPSEUDO_04247 6.3e-128 463.4 Bifidobacteriales araD 4.1.2.17,5.1.3.4 ko:K01628,ko:K03077 ko00040,ko00051,ko00053,ko01100,ko01120,map00040,map00051,map00053,map01100,map01120 M00550 R02262,R05850 RC00603,RC00604,RC01479 ko00000,ko00001,ko00002,ko01000 Bacteria 2GNI6@201174,4CZXX@85004,COG0235@1,COG0235@2 NA|NA|NA G Class II Aldolase and Adducin N-terminal domain KDBPDICH_00249 547043.BIFPSEUDO_04246 0.0 1098.6 Bifidobacteriales araB 2.7.1.16,2.7.1.17 ko:K00853,ko:K00854 ko00040,ko01100,map00040,map01100 M00014 R01526,R01639,R02439 RC00002,RC00538 ko00000,ko00001,ko00002,ko01000 Bacteria 2GVSJ@201174,4CZK7@85004,COG1070@1,COG1070@2 NA|NA|NA G FGGY family of carbohydrate kinases, C-terminal domain KDBPDICH_00250 547043.BIFPSEUDO_04244 2.1e-210 738.0 Bifidobacteriales ko:K02529 ko00000,ko03000 Bacteria 2GK1X@201174,4CYR6@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_00251 566552.BIFCAT_00185 7e-286 989.2 Bifidobacteriales maf GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0047429 1.1.1.25,2.1.1.190,3.6.1.55,3.6.1.67 ko:K00014,ko:K03215,ko:K03574,ko:K06287,ko:K08310 ko00400,ko00790,ko01100,ko01110,ko01130,ko01230,map00400,map00790,map01100,map01110,map01130,map01230 M00022,M00126 R02413,R04638 RC00002,RC00206 ko00000,ko00001,ko00002,ko01000,ko03009,ko03400 Bacteria 2GNI0@201174,4CZXF@85004,COG0424@1,COG0424@2,COG1051@1,COG1051@2 NA|NA|NA DF Maf-like protein KDBPDICH_00252 566552.BIFCAT_00186 1.9e-189 668.3 Bifidobacteriales thrB GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 M00018 R01771 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iECSE_1348.ECSE_0003,iJN678.thrB,iLJ478.TM0545,iSB619.SA_RS06620 Bacteria 2GKIW@201174,4CZN0@85004,COG0083@1,COG0083@2 NA|NA|NA E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate KDBPDICH_00253 566552.BIFCAT_00187 1.6e-241 841.6 Bifidobacteriales hom GO:0003674,GO:0003824,GO:0004412,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030312,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3 ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00017,M00018 R01773,R01775 RC00087 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1294,iSB619.SA_RS06610 Bacteria 2GIX9@201174,4CZVD@85004,COG0460@1,COG0460@2 NA|NA|NA E Homoserine dehydrogenase KDBPDICH_00254 547043.BIFPSEUDO_04240 9.4e-297 1025.4 Bifidobacteriales lysA 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKAI@201174,4CYRG@85004,COG0019@1,COG0019@2 NA|NA|NA E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine KDBPDICH_00255 547043.BIFPSEUDO_04239 0.0 1180.2 Bifidobacteriales argS GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iAF987.Gmet_1434 Bacteria 2GKQ3@201174,4CZ9J@85004,COG0018@1,COG0018@2 NA|NA|NA J Arginyl-tRNA synthetase KDBPDICH_00256 547043.BIFPSEUDO_04238 9.8e-272 942.2 Bifidobacteriales mmuP GO:0000096,GO:0000097,GO:0000100,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0015806,GO:0016020,GO:0016053,GO:0019752,GO:0022857,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072337,GO:0072348,GO:0072349,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682 ko:K02205,ko:K03293,ko:K16235,ko:K16236 ko00000,ko02000 2.A.3.1,2.A.3.1.10 Bacteria 2I2DX@201174,4D2V7@85004,COG0833@1,COG0833@2 NA|NA|NA E amino acid KDBPDICH_00257 547043.BIFPSEUDO_04236 7e-60 236.5 Bifidobacteriales psp1 3.5.99.10 ko:K09022 R11098,R11099 RC03275,RC03354 ko00000,ko01000 Bacteria 2IFCR@201174,4D0QD@85004,COG0251@1,COG0251@2 NA|NA|NA J Endoribonuclease L-PSP KDBPDICH_00259 547043.BIFPSEUDO_04234 3.1e-121 441.0 Bifidobacteriales cyaA GO:0003674,GO:0003824,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0050355 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 Bacteria 2GWD8@201174,4CZKD@85004,COG2954@1,COG2954@2 NA|NA|NA S CYTH KDBPDICH_00260 547043.BIFPSEUDO_04233 1.9e-170 605.1 Bifidobacteriales trxA2 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 ko:K03671,ko:K05838 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Bacteria 2GJ7B@201174,4CZHU@85004,COG3118@1,COG3118@2 NA|NA|NA O Tetratricopeptide repeat KDBPDICH_00261 547043.BIFPSEUDO_04232 2.7e-180 637.9 Bifidobacteriales Bacteria 28PR0@1,2GNNZ@201174,2ZCCY@2,4CYX7@85004 NA|NA|NA KDBPDICH_00262 547043.BIFPSEUDO_04231 4.7e-195 687.2 Bifidobacteriales Bacteria 2DMQ0@1,2IA0N@201174,32SYI@2,4CYQ0@85004 NA|NA|NA KDBPDICH_00263 547043.BIFPSEUDO_04230 6.8e-149 533.5 Bifidobacteriales fkbB 5.2.1.8 ko:K01802 ko00000,ko01000 Bacteria 2GJK2@201174,4CZEF@85004,COG0545@1,COG0545@2 NA|NA|NA M FKBP-type peptidyl-prolyl cis-trans isomerase KDBPDICH_00264 78346.BRUM_1412 2.3e-122 444.9 Bifidobacteriales nucS ko:K07503 ko00000,ko01000 Bacteria 2GIYB@201174,4CYXA@85004,COG1637@1,COG1637@2 NA|NA|NA L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures KDBPDICH_00265 547043.BIFPSEUDO_04227 2.3e-44 184.5 Bifidobacteriales atpC GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 Bacteria 2HZPJ@201174,4D16F@85004,COG0355@1,COG0355@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane KDBPDICH_00266 547043.BIFPSEUDO_04226 5.6e-283 979.5 Bifidobacteriales atpD GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 Bacteria 2GIY6@201174,4CZGY@85004,COG0055@1,COG0055@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits KDBPDICH_00267 547043.BIFPSEUDO_04225 1.6e-163 582.0 Bifidobacteriales atpG GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iLJ478.TM1611,iSSON_1240.SSON_3886,iYL1228.KPN_04138 Bacteria 2GJ7Q@201174,4CYVJ@85004,COG0224@1,COG0224@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex KDBPDICH_00268 547043.BIFPSEUDO_04224 3.8e-309 1066.6 Bifidobacteriales atpA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 iIT341.HP1134,iSB619.SA_RS10975,iSbBS512_1146.SbBS512_E4187 Bacteria 2GJRJ@201174,4CZI7@85004,COG0056@1,COG0056@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit KDBPDICH_00269 547043.BIFPSEUDO_04223 5e-148 530.4 Bifidobacteriales atpH ko:K02109,ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 Bacteria 2GMJ5@201174,4CZ9V@85004,COG0712@1,COG0712@2 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation KDBPDICH_00270 547043.BIFPSEUDO_04222 4.4e-57 227.6 Bifidobacteriales atpF ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 Bacteria 2GJS4@201174,4CYY5@85004,COG0711@1,COG0711@2 NA|NA|NA C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) KDBPDICH_00271 1435051.BMOU_0411 8.9e-31 139.0 Bifidobacteriales atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 Bacteria 2GQI6@201174,4D16J@85004,COG0636@1,COG0636@2 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation KDBPDICH_00272 547043.BIFPSEUDO_04220 2e-146 525.0 Bifidobacteriales atpB ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 Bacteria 2H3PR@201174,4CYZD@85004,COG0356@1,COG0356@2 NA|NA|NA C it plays a direct role in the translocation of protons across the membrane KDBPDICH_00273 547043.BIFPSEUDO_04219 5.4e-208 729.9 Bifidobacteriales metAA GO:0003674,GO:0003824,GO:0008374,GO:0008899,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750 2.3.1.46 ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 M00017 R01777 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 iLJ478.TM0881 Bacteria 2GK5E@201174,4CZRK@85004,COG1897@1,COG1897@2 NA|NA|NA E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine KDBPDICH_00275 1437610.BREU_1242 5.7e-09 65.9 Bifidobacteriales Bacteria 2BJMR@1,2GVHC@201174,32DZ9@2,4D1MW@85004 NA|NA|NA K BetR domain KDBPDICH_00280 401473.BDP_0582 4.9e-26 123.6 Bifidobacteriales Bacteria 2A8DF@1,2HAZD@201174,30XF6@2,4D2P0@85004 NA|NA|NA KDBPDICH_00281 401473.BDP_0583 4.6e-15 87.0 Bifidobacteriales Bacteria 2BCNY@1,2HBNP@201174,32696@2,4D2J2@85004 NA|NA|NA KDBPDICH_00283 1435051.BMOU_1851 3.7e-17 93.6 Bifidobacteriales Bacteria 2B8DC@1,2H5S9@201174,321NA@2,4D2AW@85004 NA|NA|NA S Helix-turn-helix domain KDBPDICH_00284 1435051.BMOU_1852 1.4e-98 365.9 Bifidobacteriales Bacteria 2A22N@1,2GMZE@201174,30QCR@2,4D0IQ@85004 NA|NA|NA L HNH endonuclease KDBPDICH_00285 1435051.BMOU_1853 2.3e-40 171.4 Bifidobacteriales Bacteria 2BPD5@1,2IQQY@201174,32I57@2,4D1B2@85004 NA|NA|NA KDBPDICH_00286 1435051.BMOU_1854 3.4e-237 827.4 Bifidobacteriales Bacteria 2IH1M@201174,4CZYC@85004,COG4626@1,COG4626@2 NA|NA|NA S Terminase KDBPDICH_00287 1435051.BMOU_1855 6.7e-161 573.5 Bifidobacteriales Bacteria 2IE2H@201174,4CZUZ@85004,COG4695@1,COG4695@2 NA|NA|NA S Phage portal protein KDBPDICH_00288 1435051.BMOU_1856 7.5e-214 750.0 Bifidobacteriales ko:K06904 ko00000 Bacteria 2HBPZ@201174,4CZX1@85004,COG3740@1,COG3740@2 NA|NA|NA S Caudovirus prohead serine protease KDBPDICH_00289 1435051.BMOU_1857 3.3e-42 177.6 Bifidobacteriales Bacteria 2AYAB@1,2IRXX@201174,31QCV@2,4D1AK@85004 NA|NA|NA KDBPDICH_00290 1435051.BMOU_1858 6.7e-36 156.8 Bifidobacteriales Bacteria 2AYSK@1,2ISUZ@201174,31QXV@2,4D1C0@85004 NA|NA|NA KDBPDICH_00291 1435051.BMOU_1859 2.6e-60 238.0 Bifidobacteriales Bacteria 2DYBM@1,2GRRD@201174,34920@2,4D13J@85004 NA|NA|NA KDBPDICH_00292 1435051.BMOU_1860 8.3e-55 219.5 Bifidobacteriales Bacteria 2FJV8@1,2GTIC@201174,34BHS@2,4D11C@85004 NA|NA|NA KDBPDICH_00293 1435051.BMOU_1861 4.5e-37 160.2 Bifidobacteriales Bacteria 2BK4B@1,2GWZB@201174,32EHY@2,4D1P7@85004 NA|NA|NA KDBPDICH_00294 401473.BDP_0595 5.4e-150 538.1 Bifidobacteriales Bacteria 2H75F@201174,4CZ1P@85004,COG3941@1,COG3941@2,COG5412@1,COG5412@2 NA|NA|NA NT phage tail tape measure protein KDBPDICH_00295 1680.BADO_1578 2.4e-108 399.4 Bifidobacteriales Bacteria 2ANWQ@1,2IBKB@201174,31DXB@2,4D0NF@85004 NA|NA|NA KDBPDICH_00297 1680.BADO_1576 2.3e-10 71.2 Bifidobacteriales Bacteria 297JY@1,2GTZI@201174,2ZUT1@2,4D1JI@85004 NA|NA|NA KDBPDICH_00298 566552.BIFCAT_00299 7.1e-75 287.3 Bifidobacteriales 3.2.1.20,3.5.1.28 ko:K01187,ko:K01448 ko00052,ko00500,ko01100,ko01503,map00052,map00500,map01100,map01503 M00727 R00028,R00801,R00802,R04112,R06087,R06088 RC00028,RC00049,RC00064,RC00077,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 GH31 Bacteria 2HZKI@201174,4D0U3@85004,COG3023@1,COG3023@2 NA|NA|NA V N-acetylmuramoyl-L-alanine amidase KDBPDICH_00299 315750.BPUM_3085 3.2e-11 74.7 Bacillus xhlB Bacteria 1VKC1@1239,1ZJ11@1386,2DRCI@1,33B7V@2,4HRDZ@91061 NA|NA|NA S SPP1 phage holin KDBPDICH_00300 566552.BIFCAT_00297 2.4e-89 335.5 Bifidobacteriales Bacteria 2IH6A@201174,4CZ62@85004,COG4974@1,COG4974@2 NA|NA|NA L Phage integrase family KDBPDICH_00301 547043.BIFPSEUDO_04216 5e-273 946.4 Bifidobacteriales frc GO:0003674,GO:0003824,GO:0008150,GO:0008410,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016740,GO:0016782,GO:0033608,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0104004 2.8.3.16 ko:K07749 ko00000,ko01000 iUMNK88_1353.UMNK88_2972 Bacteria 2GIU7@201174,4D07S@85004,COG1804@1,COG1804@2 NA|NA|NA C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate KDBPDICH_00302 547043.BIFPSEUDO_04215 1.5e-192 678.7 Bifidobacteriales yfdV GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K07088 ko00000 iECW_1372.ECW_m2605,iWFL_1372.ECW_m2605 Bacteria 2GUU2@201174,4CYYA@85004,COG0679@1,COG0679@2 NA|NA|NA S Membrane transport protein KDBPDICH_00303 547043.BIFPSEUDO_04213 0.0 1209.9 Bifidobacteriales oxc GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0008150,GO:0008152,GO:0008949,GO:0009056,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019752,GO:0019842,GO:0030554,GO:0030976,GO:0032553,GO:0032555,GO:0032559,GO:0033609,GO:0033611,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043531,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0071704,GO:0097159,GO:0097367,GO:0104004,GO:1901265,GO:1901363,GO:1901575,GO:1901681 4.1.1.8 ko:K01577 ko00630,ko01100,map00630,map01100 R01908 RC00620 ko00000,ko00001,ko01000 iEcSMS35_1347.EcSMS35_2523,iNJ661.Rv0118c Bacteria 2GM6Y@201174,4CZWD@85004,COG0028@1,COG0028@2 NA|NA|NA EH Thiamine pyrophosphate enzyme, central domain KDBPDICH_00304 547043.BIFPSEUDO_04211 7.1e-175 619.8 Bifidobacteriales Bacteria 2IK2B@201174,4D2XD@85004,COG4932@1,COG4932@2 NA|NA|NA M LPXTG-motif cell wall anchor domain protein KDBPDICH_00305 547043.BIFPSEUDO_04210 0.0 1440.2 Bifidobacteriales glgE 2.4.99.16 ko:K16147 ko00500,ko01100,map00500,map01100 R09994 ko00000,ko00001,ko01000 GH13 Bacteria 2GJKR@201174,4CZSK@85004,COG0366@1,COG0366@2 NA|NA|NA G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB KDBPDICH_00306 547043.BIFPSEUDO_04209 3.4e-91 340.9 Bifidobacteriales ppa GO:0000287,GO:0003674,GO:0003824,GO:0004427,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0071944 3.6.1.1 ko:K01507 ko00190,map00190 ko00000,ko00001,ko01000 iNJ661.Rv3628 Bacteria 2GM7F@201174,4CYWS@85004,COG0221@1,COG0221@2 NA|NA|NA C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions KDBPDICH_00307 547043.BIFPSEUDO_03966 0.0 1897.5 Bifidobacteriales 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 GH3 Bacteria 2GQQR@201174,4CZ02@85004,COG1472@1,COG1472@2 NA|NA|NA G Fibronectin type III-like domain KDBPDICH_00308 547043.BIFPSEUDO_03968 0.0 1222.6 Bifidobacteriales Bacteria 2GIV0@201174,4CYQG@85004,COG0515@1,COG0515@2 NA|NA|NA KLT Protein tyrosine kinase KDBPDICH_00309 547043.BIFPSEUDO_03969 1.4e-149 535.8 Bifidobacteriales Bacteria 2GN3N@201174,4CZBD@85004,COG1651@1,COG1651@2 NA|NA|NA O Thioredoxin KDBPDICH_00311 547043.BIFPSEUDO_03971 3e-196 691.4 Bifidobacteriales Bacteria 2H4RU@201174,4CYY0@85004,COG3583@1,COG3583@2 NA|NA|NA S G5 KDBPDICH_00312 547043.BIFPSEUDO_03972 2e-166 591.7 Bifidobacteriales ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182,2.1.1.184 ko:K00561,ko:K02528 R10716 RC00003,RC03257 br01600,ko00000,ko01000,ko01504,ko03009 Bacteria 2GKBT@201174,4CYS9@85004,COG0030@1,COG0030@2 NA|NA|NA J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits KDBPDICH_00313 547043.BIFPSEUDO_03973 3.3e-169 600.9 Bifidobacteriales ispE GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006629,GO:0006720,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050515,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576 2.1.1.182,2.7.1.148 ko:K00919,ko:K02528,ko:K16924 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096,M00582 R05634,R10716 RC00002,RC00003,RC01439,RC03257 ko00000,ko00001,ko00002,ko01000,ko02000,ko03009 3.A.1.29 iEC55989_1330.EC55989_1304,iLJ478.TM1383,iYO844.BSU00460 Bacteria 2GKXD@201174,4CZMW@85004,COG1947@1,COG1947@2 NA|NA|NA F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol KDBPDICH_00314 547043.BIFPSEUDO_03974 2.6e-109 401.4 Bifidobacteriales Bacteria 2E1BJ@1,2IKG0@201174,32WRF@2,4D0S1@85004 NA|NA|NA S LytR cell envelope-related transcriptional attenuator KDBPDICH_00315 547043.BIFPSEUDO_03976 3.8e-284 983.4 Bifidobacteriales cca 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 Bacteria 2GMT1@201174,4CYUH@85004,COG0617@1,COG0617@2 NA|NA|NA J Probable RNA and SrmB- binding site of polymerase A KDBPDICH_00316 547043.BIFPSEUDO_03977 6.3e-122 443.4 Bifidobacteriales deoC 3.6.1.13,3.6.1.17,3.6.1.55,3.6.1.61 ko:K01515,ko:K01518,ko:K03574,ko:K18445 ko00230,ko00240,map00230,map00240 R00184,R00969,R01054,R01232,R02805 RC00002 ko00000,ko00001,ko01000,ko03400 Bacteria 2GWEB@201174,4CZAV@85004,COG0494@1,COG0494@2 NA|NA|NA L Belongs to the Nudix hydrolase family KDBPDICH_00317 547043.BIFPSEUDO_03978 0.0 1265.0 Bifidobacteriales Bacteria 2I2GZ@201174,4D2V9@85004,COG1361@1,COG1361@2 NA|NA|NA M Conserved repeat domain KDBPDICH_00318 547043.BIFPSEUDO_03979 7.8e-305 1052.4 Bifidobacteriales murJ ko:K03980 ko00000,ko01011,ko02000 2.A.66.4 Bacteria 2GKN0@201174,4CZ8M@85004,COG0728@1,COG0728@2 NA|NA|NA KLT MviN-like protein KDBPDICH_00319 547043.BIFPSEUDO_03980 0.0 1139.8 Bifidobacteriales murJ ko:K03980 ko00000,ko01011,ko02000 2.A.66.4 Bacteria 2GKN0@201174,4CZ8M@85004,COG0728@1,COG0728@2 NA|NA|NA KLT MviN-like protein KDBPDICH_00320 216816.GS08_00450 4e-13 80.5 Bifidobacteriales ko:K07133 ko00000 Bacteria 2GK1Q@201174,4CZNQ@85004,COG1373@1,COG1373@2 NA|NA|NA S Domain of unknown function (DUF4143) KDBPDICH_00321 547043.BIFPSEUDO_03983 1.4e-121 442.2 Bifidobacteriales yorS 3.1.3.5 ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 Bacteria 2IAHF@201174,4D0AG@85004,COG4502@1,COG4502@2 NA|NA|NA S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) KDBPDICH_00323 547043.BIFPSEUDO_03986 7e-14 82.0 Bifidobacteriales Bacteria 2B4NV@1,2GYXI@201174,31XF4@2,4D1TF@85004 NA|NA|NA S Psort location Extracellular, score 8.82 KDBPDICH_00324 547043.BIFPSEUDO_03987 3.1e-181 641.0 Bifidobacteriales trxB GO:0000166,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9,4.3.1.9 ko:K00384,ko:K22345 ko00030,ko00450,map00030,map00450 R01544,R02016,R03596,R09372 RC00013,RC00544,RC02518,RC02873 ko00000,ko00001,ko01000 iPC815.YPO1374 Bacteria 2GKD2@201174,4CYU9@85004,COG0492@1,COG0492@2 NA|NA|NA C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family KDBPDICH_00325 547043.BIFPSEUDO_03988 1.5e-202 712.2 Bifidobacteriales parB GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005694,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0060187,GO:0071944 ko:K03497 ko00000,ko03000,ko03036,ko04812 Bacteria 2GNRN@201174,4CYUE@85004,COG1475@1,COG1475@2 NA|NA|NA K Belongs to the ParB family KDBPDICH_00326 547043.BIFPSEUDO_03989 4.5e-172 610.5 Bifidobacteriales parA ko:K03496 ko00000,ko03036,ko04812 Bacteria 2GMU7@201174,4CZ2D@85004,COG1192@1,COG1192@2 NA|NA|NA D CobQ CobB MinD ParA nucleotide binding domain protein KDBPDICH_00327 547043.BIFPSEUDO_03990 3e-126 458.0 Bifidobacteriales rsmG GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 ko:K03501 ko00000,ko01000,ko03009,ko03036 Bacteria 2GM9Z@201174,4CZ29@85004,COG0357@1,COG0357@2 NA|NA|NA J Specifically methylates the N7 position of a guanine in 16S rRNA KDBPDICH_00328 547043.BIFPSEUDO_03991 3.6e-91 340.9 Bifidobacteriales jag ko:K06346,ko:K09749 ko00000 Bacteria 2GPZK@201174,4CYQQ@85004,COG1847@1,COG1847@2 NA|NA|NA S Putative single-stranded nucleic acids-binding domain KDBPDICH_00329 547043.BIFPSEUDO_03992 3.9e-190 670.6 Bifidobacteriales yidC ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 Bacteria 2GJBU@201174,4CYZ2@85004,COG0706@1,COG0706@2 NA|NA|NA U Membrane protein insertase, YidC Oxa1 family KDBPDICH_00330 1435051.BMOU_1309 5.9e-14 82.4 Bifidobacteriales rpmH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02914 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GQFY@201174,4D1EF@85004,COG0230@1,COG0230@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL34 family KDBPDICH_00331 547043.BIFPSEUDO_03996 2.9e-306 1057.0 Bifidobacteriales dnaA GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006172,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046031,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990837 ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 Bacteria 2GJKI@201174,4CZDW@85004,COG0593@1,COG0593@2 NA|NA|NA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids KDBPDICH_00332 547043.BIFPSEUDO_03998 1e-204 719.2 Bifidobacteriales dnaN GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 2GJK3@201174,4CZTV@85004,COG0592@1,COG0592@2 NA|NA|NA L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria KDBPDICH_00333 547043.BIFPSEUDO_03999 1.1e-234 818.9 Bifidobacteriales recF GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0018130,GO:0019438,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 ko:K03629,ko:K07459 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 2GJCS@201174,4CZQT@85004,COG1195@1,COG1195@2 NA|NA|NA L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP KDBPDICH_00334 547043.BIFPSEUDO_04000 6.2e-90 336.7 Bifidobacteriales Bacteria 2GNQ4@201174,4D157@85004,COG5512@1,COG5512@2 NA|NA|NA S Protein of unknown function (DUF721) KDBPDICH_00335 547043.BIFPSEUDO_04002 0.0 1321.6 Bifidobacteriales gyrB GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 ko:K02470 ko00000,ko01000,ko03032,ko03400 Bacteria 2GKGP@201174,4CZ47@85004,COG0187@1,COG0187@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner KDBPDICH_00336 566552.BIFCAT_00042 0.0 1667.1 Bifidobacteriales gyrA GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 ko:K02469 ko00000,ko01000,ko03032,ko03400 Bacteria 2GJ2Q@201174,4CYRP@85004,COG0188@1,COG0188@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner KDBPDICH_00337 547043.BIFPSEUDO_04004 3.3e-68 264.6 Bifidobacteriales GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 Bacteria 2GKZP@201174,4D0XB@85004,COG3266@1,COG3266@2 NA|NA|NA S Transmembrane domain of unknown function (DUF3566) KDBPDICH_00338 547043.BIFPSEUDO_04005 1.2e-260 905.2 Bifidobacteriales gdhA 1.4.1.4 ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 R00248 RC00006,RC02799 ko00000,ko00001,ko01000 Bacteria 2GKXG@201174,4CYTN@85004,COG0334@1,COG0334@2 NA|NA|NA E Belongs to the Glu Leu Phe Val dehydrogenases family KDBPDICH_00339 547043.BIFPSEUDO_04006 2.9e-58 231.5 Bifidobacteriales mscL GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 ko:K03282 ko00000,ko02000 1.A.22.1 Bacteria 2IQDN@201174,4D13A@85004,COG1970@1,COG1970@2 NA|NA|NA M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell KDBPDICH_00343 547043.BIFPSEUDO_04010 1e-58 233.8 Bifidobacteriales ko:K07043 ko00000 Bacteria 2GMP6@201174,4CZF9@85004,COG1451@1,COG1451@2 NA|NA|NA S Protein of unknown function DUF45 KDBPDICH_00344 547043.BIFPSEUDO_04011 2e-188 664.8 Bifidobacteriales ldh 1.1.1.27 ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 R00703,R01000,R03104 RC00031,RC00044 ko00000,ko00001,ko01000,ko04147 Bacteria 2IASS@201174,4CZRT@85004,COG0039@1,COG0039@2 NA|NA|NA C Belongs to the LDH MDH superfamily KDBPDICH_00345 547043.BIFPSEUDO_04012 2.8e-241 840.9 Bifidobacteriales ytfL GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03699 ko00000,ko02042 Bacteria 2GKN5@201174,4CZKA@85004,COG1253@1,COG1253@2 NA|NA|NA P Transporter associated domain KDBPDICH_00346 547043.BIFPSEUDO_04013 5.3e-119 433.7 Bifidobacteriales cah GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008270,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0040007,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0071944 4.2.1.1 ko:K01673 ko00910,map00910 R00132,R10092 RC02807 ko00000,ko00001,ko01000 Bacteria 2GT5H@201174,4D06V@85004,COG0288@1,COG0288@2 NA|NA|NA P Reversible hydration of carbon dioxide KDBPDICH_00347 547043.BIFPSEUDO_04016 0.0 1826.6 Bifidobacteriales ppc GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 M00168,M00170,M00171,M00172,M00173,M00346,M00374 R00345 RC02741 ko00000,ko00001,ko00002,ko01000 iJN678.ppc Bacteria 2GKDB@201174,4CZS0@85004,COG2352@1,COG2352@2 NA|NA|NA H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle KDBPDICH_00348 547043.BIFPSEUDO_04017 0.0 1144.0 Bifidobacteriales yjjP Bacteria 2HZ8C@201174,4CYR2@85004,COG2966@1,COG2966@2,COG3610@1,COG3610@2 NA|NA|NA S Threonine/Serine exporter, ThrE KDBPDICH_00349 547043.BIFPSEUDO_04018 9.4e-300 1035.4 Bifidobacteriales putP GO:0003333,GO:0003674,GO:0005215,GO:0005283,GO:0005298,GO:0005342,GO:0005343,GO:0005416,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006820,GO:0006865,GO:0006869,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0010876,GO:0015075,GO:0015077,GO:0015081,GO:0015171,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015370,GO:0015672,GO:0015711,GO:0015718,GO:0015804,GO:0015824,GO:0015849,GO:0015908,GO:0015912,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0033036,GO:0034220,GO:0035725,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:1903825,GO:1905039 ko:K03307,ko:K11928 ko00000,ko02000 2.A.21,2.A.21.2 iSbBS512_1146.SbBS512_E2302 Bacteria 2I041@201174,4CZS2@85004,COG0591@1,COG0591@2 NA|NA|NA E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family KDBPDICH_00350 547043.BIFPSEUDO_04019 2.2e-204 718.0 Bifidobacteriales trpS GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GJ9A@201174,4CYXM@85004,COG0180@1,COG0180@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family KDBPDICH_00351 547043.BIFPSEUDO_04020 1.4e-41 175.6 Bifidobacteriales Bacteria 2EGRW@1,2HZNH@201174,32FNP@2,4D120@85004 NA|NA|NA S Protein of unknown function (DUF3073) KDBPDICH_00352 547043.BIFPSEUDO_04021 1.7e-63 248.4 Bifidobacteriales Bacteria 2IQBF@201174,4D10H@85004,COG3255@1,COG3255@2 NA|NA|NA I Sterol carrier protein KDBPDICH_00353 547043.BIFPSEUDO_04022 0.0 1648.3 Bifidobacteriales glgP GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 R02111 ko00000,ko00001,ko01000 GT35 Bacteria 2GIVZ@201174,4CZ3V@85004,COG0058@1,COG0058@2 NA|NA|NA G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties KDBPDICH_00354 547043.BIFPSEUDO_04023 3.4e-35 153.7 Bifidobacteriales Bacteria 2BFAJ@1,2ISGB@201174,3293I@2,4D185@85004 NA|NA|NA KDBPDICH_00355 547043.BIFPSEUDO_04025 3.1e-147 527.7 Bifidobacteriales gluP 3.4.21.105 ko:K19225 ko00000,ko01000,ko01002 Bacteria 2GJYG@201174,4CZJ0@85004,COG0705@1,COG0705@2 NA|NA|NA S Rhomboid family KDBPDICH_00356 547043.BIFPSEUDO_04027 3e-241 840.9 Bifidobacteriales ko:K15257 ko00000,ko01000,ko03016 Bacteria 2HZAY@201174,4CZEU@85004,COG0742@1,COG0742@2 NA|NA|NA L ribosomal rna small subunit methyltransferase KDBPDICH_00357 566552.BIFCAT_00070 1.2e-56 226.1 Bifidobacteriales crgA Bacteria 2E4NY@1,2GQPW@201174,32ZHR@2,4D0ZH@85004 NA|NA|NA D Involved in cell division KDBPDICH_00358 547043.BIFPSEUDO_04030 6.8e-142 510.0 Bifidobacteriales Bacteria 2GJ9Y@201174,4CZ1A@85004,COG3879@1,COG3879@2 NA|NA|NA S Bacterial protein of unknown function (DUF881) KDBPDICH_00359 547043.BIFPSEUDO_04031 1.8e-209 734.9 Bifidobacteriales srtA 3.4.22.70 ko:K07284 ko00000,ko01000,ko01002,ko01011 Bacteria 2GKT6@201174,4CYZ5@85004,COG3764@1,COG3764@2 NA|NA|NA M Sortase family KDBPDICH_00360 547043.BIFPSEUDO_04033 1.7e-119 435.3 Bifidobacteriales trpG GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 ko:K01664,ko:K13950 ko00790,map00790 R01716 RC00010,RC01418 ko00000,ko00001,ko01000 Bacteria 2GJUX@201174,4D09E@85004,COG0512@1,COG0512@2 NA|NA|NA EH para-aminobenzoate synthase glutamine amidotransferase component II KDBPDICH_00361 547043.BIFPSEUDO_04035 0.0 1246.9 Bifidobacteriales pknB 2.7.11.1 ko:K12132 ko00000,ko01000,ko01001 Bacteria 2GJ1J@201174,4CZFU@85004,COG0515@1,COG0515@2,COG2815@1,COG2815@2 NA|NA|NA KLT Protein tyrosine kinase KDBPDICH_00362 547043.BIFPSEUDO_04036 5.8e-177 626.7 Bifidobacteriales Bacteria 2GMPZ@201174,4CYUK@85004,COG0515@1,COG0515@2 NA|NA|NA T Protein tyrosine kinase KDBPDICH_00363 566552.BIFCAT_00077 1.6e-258 898.3 Bifidobacteriales pbpA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K05364 ko00550,map00550 R04519 RC00005,RC00049 ko00000,ko00001,ko01011 Bacteria 2GJUQ@201174,4CYTI@85004,COG0768@1,COG0768@2 NA|NA|NA M penicillin-binding protein KDBPDICH_00364 547043.BIFPSEUDO_04038 5.6e-270 936.4 Bifidobacteriales rodA GO:0002682,GO:0002684,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 ko:K03588,ko:K05364,ko:K05837 ko00550,ko04112,map00550,map04112 R04519 RC00005,RC00049 ko00000,ko00001,ko01011,ko02000,ko03036 2.A.103.1 Bacteria 2GJTI@201174,4CZ67@85004,COG0772@1,COG0772@2 NA|NA|NA D Belongs to the SEDS family KDBPDICH_00365 547043.BIFPSEUDO_04039 6.8e-242 843.2 Bifidobacteriales pstP GO:0000287,GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004647,GO:0004721,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006469,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009892,GO:0009987,GO:0010563,GO:0010605,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019220,GO:0019222,GO:0019538,GO:0030145,GO:0030312,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0033673,GO:0036211,GO:0042325,GO:0042326,GO:0042578,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043392,GO:0043412,GO:0043549,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0045859,GO:0045936,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051098,GO:0051100,GO:0051101,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 2GJ3M@201174,4CZDN@85004,COG0631@1,COG0631@2 NA|NA|NA T Sigma factor PP2C-like phosphatases KDBPDICH_00366 547043.BIFPSEUDO_04040 9.6e-73 279.6 Bifidobacteriales fhaB GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944 Bacteria 2GKA7@201174,4D0RN@85004,COG1716@1,COG1716@2 NA|NA|NA T Inner membrane component of T3SS, cytoplasmic domain KDBPDICH_00367 547043.BIFPSEUDO_04041 1.2e-131 475.7 Bifidobacteriales fhaA GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 ko:K02283 ko00000,ko02035,ko02044 Bacteria 2GNU2@201174,4CYUI@85004,COG1716@1,COG1716@2 NA|NA|NA T Protein of unknown function (DUF2662) KDBPDICH_00368 547043.BIFPSEUDO_04042 0.0 1582.0 Bifidobacteriales dpp4 3.4.14.5 ko:K01278 ko04974,map04974 ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 Bacteria 2GJ6A@201174,4CZAE@85004,COG1506@1,COG1506@2 NA|NA|NA E Dipeptidyl peptidase IV (DPP IV) N-terminal region KDBPDICH_00369 547043.BIFPSEUDO_04043 3.7e-219 767.3 Bifidobacteriales 2.7.13.3 ko:K07675,ko:K20263 ko02020,ko02024,map02020,map02024 M00473,M00818 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 2II1W@201174,4D0V3@85004,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase KDBPDICH_00370 547043.BIFPSEUDO_04044 9.3e-113 412.9 Bifidobacteriales Bacteria 2IF55@201174,4D00S@85004,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon KDBPDICH_00371 566552.BIFCAT_00086 1.1e-192 679.1 Bifidobacteriales pldB GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0008150,GO:0008152,GO:0016020,GO:0016298,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0016788,GO:0044238,GO:0044464,GO:0052689,GO:0071704,GO:0071944 3.1.1.5 ko:K01048 ko00564,map00564 ko00000,ko00001,ko01000 iETEC_1333.ETEC_4102,iEcHS_1320.EcHS_A4049 Bacteria 2HZ9U@201174,4CZ5E@85004,COG2267@1,COG2267@2 NA|NA|NA I Serine aminopeptidase, S33 KDBPDICH_00372 566552.BIFCAT_00087 5.7e-159 567.0 Bifidobacteriales yicL Bacteria 2HZCH@201174,4CZRZ@85004,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family KDBPDICH_00374 547043.BIFPSEUDO_04134 8.3e-31 139.4 Bacteria yuxJ Bacteria COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_00375 547043.BIFPSEUDO_04135 3.7e-48 197.6 Bifidobacteriales ko:K18926 M00715 ko00000,ko00002,ko02000 2.A.1.3.30 Bacteria 2GIZX@201174,4CZ0R@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_00376 547043.BIFPSEUDO_04135 4.6e-92 344.0 Bifidobacteriales ko:K18926 M00715 ko00000,ko00002,ko02000 2.A.1.3.30 Bacteria 2GIZX@201174,4CZ0R@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_00378 547043.BIFPSEUDO_04137 2.1e-58 231.5 Bifidobacteriales Bacteria 2B0X3@1,2GS0B@201174,31T9V@2,4D1HX@85004 NA|NA|NA KDBPDICH_00379 547043.BIFPSEUDO_04138 1.5e-191 675.2 Bifidobacteriales 3.1.1.53 ko:K05970 ko00000,ko01000 Bacteria 2I93Y@201174,4D07C@85004,COG2755@1,COG2755@2 NA|NA|NA E Carbohydrate esterase, sialic acid-specific acetylesterase KDBPDICH_00380 547043.BIFPSEUDO_04138 1.3e-93 349.4 Bifidobacteriales 3.1.1.53 ko:K05970 ko00000,ko01000 Bacteria 2I93Y@201174,4D07C@85004,COG2755@1,COG2755@2 NA|NA|NA E Carbohydrate esterase, sialic acid-specific acetylesterase KDBPDICH_00381 742722.HMPREF9463_00369 4.6e-11 73.2 Actinobacteria Bacteria 28VW7@1,2H8QX@201174,2ZHXN@2 NA|NA|NA KDBPDICH_00382 547043.BIFPSEUDO_04140 5.8e-74 284.6 Bifidobacteriales Bacteria 2B5Q5@1,2IPRN@201174,31YJP@2,4D144@85004 NA|NA|NA KDBPDICH_00383 547043.BIFPSEUDO_04141 2.6e-258 897.5 Bifidobacteriales ko:K07133 ko00000 Bacteria 2HVUN@201174,4CZHJ@85004,COG1373@1,COG1373@2 NA|NA|NA S AAA domain KDBPDICH_00384 547043.BIFPSEUDO_04142 4.7e-311 1073.2 Bifidobacteriales lytC 3.2.1.17,3.2.1.96 ko:K01185,ko:K01227 ko00511,map00511 ko00000,ko00001,ko01000 Bacteria 2I2GQ@201174,4D08Z@85004,COG3757@1,COG3757@2 NA|NA|NA M Glycosyl hydrolases family 25 KDBPDICH_00385 547043.BIFPSEUDO_04144 3.4e-174 617.5 Bifidobacteriales rfbA GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005996,GO:0006006,GO:0006139,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008879,GO:0009058,GO:0009059,GO:0009117,GO:0009141,GO:0009147,GO:0009200,GO:0009211,GO:0009219,GO:0009225,GO:0009226,GO:0009262,GO:0009394,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019299,GO:0019300,GO:0019305,GO:0019318,GO:0019319,GO:0019438,GO:0019637,GO:0019692,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0045226,GO:0046075,GO:0046364,GO:0046379,GO:0046383,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0334 Bacteria 2GP20@201174,4CZ5F@85004,COG1209@1,COG1209@2 NA|NA|NA H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis KDBPDICH_00386 547043.BIFPSEUDO_04145 2.2e-276 957.6 Bifidobacteriales rmlC 1.1.1.133,5.1.3.13 ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777,R06514 RC00182,RC01531 ko00000,ko00001,ko00002,ko01000 Bacteria 2GNY8@201174,4CZ18@85004,COG1091@1,COG1091@2,COG1898@1,COG1898@2 NA|NA|NA M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose KDBPDICH_00387 547043.BIFPSEUDO_04146 4.4e-198 697.2 Bifidobacteriales rfbB GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv3464 Bacteria 2GNDU@201174,4CZZY@85004,COG1088@1,COG1088@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily KDBPDICH_00388 547043.BIFPSEUDO_04147 2.7e-94 351.3 Bifidobacteriales 1.1.1.339 ko:K19180 ko00523,ko01130,map00523,map01130 R10190 RC00182 ko00000,ko00001,ko01000 Bacteria 2IBI2@201174,4CZUP@85004,COG0451@1,COG0451@2 NA|NA|NA GM NAD dependent epimerase/dehydratase family KDBPDICH_00389 78345.BMERY_1865 4.3e-190 671.0 Bifidobacteriales Bacteria 2AJ90@1,2I28A@201174,319TX@2,4D0A5@85004 NA|NA|NA S Glucosyl transferase GtrII KDBPDICH_00390 702459.BBPR_0053 2.9e-152 544.7 Bifidobacteriales yfdH 2.4.2.53 ko:K10012,ko:K12999,ko:K13670 ko00520,ko01503,map00520,map01503 M00721,M00761 R07661 RC00005,RC02954 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005,ko02000 4.D.2.1.8 GT2 Bacteria 2I43I@201174,4D2XH@85004,COG1216@1,COG1216@2 NA|NA|NA M Glycosyltransferase like family 2 KDBPDICH_00391 547043.BIFPSEUDO_04150 4.5e-165 587.4 Bifidobacteriales Bacteria 2IDHY@201174,4CZ27@85004,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase family KDBPDICH_00392 547043.BIFPSEUDO_04151 0.0 1351.3 Bifidobacteriales rgpF ko:K07272 ko00000,ko01000,ko01003,ko01005 Bacteria 2HQS4@201174,4CYYB@85004,COG3754@1,COG3754@2 NA|NA|NA M Rhamnan synthesis protein F KDBPDICH_00393 547043.BIFPSEUDO_04152 2.2e-243 847.8 Bifidobacteriales rgpD 3.6.3.38 ko:K01990,ko:K09689,ko:K09691 ko02010,map02010 M00249,M00250,M00254 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.101,3.A.1.103 Bacteria 2GIVF@201174,4CZ1B@85004,COG1134@1,COG1134@2 NA|NA|NA GM ABC transporter, ATP-binding protein KDBPDICH_00394 547043.BIFPSEUDO_04153 1.3e-148 532.3 Bifidobacteriales rgpC ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GP5K@201174,4CZ73@85004,COG1682@1,COG1682@2 NA|NA|NA U Transport permease protein KDBPDICH_00395 547043.BIFPSEUDO_04154 5.7e-194 683.3 Bifidobacteriales Bacteria 2I2H4@201174,4CYWJ@85004,COG1215@1,COG1215@2 NA|NA|NA M Glycosyltransferase like family 2 KDBPDICH_00396 547043.BIFPSEUDO_04155 0.0 1500.7 Bifidobacteriales XK27_08315 Bacteria 2HVID@201174,4CZ6J@85004,COG1368@1,COG1368@2 NA|NA|NA M Psort location CytoplasmicMembrane, score 9.26 KDBPDICH_00397 566552.BIFCAT_00308 2.4e-203 714.5 Bifidobacteriales rfbB GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv3464 Bacteria 2GNDU@201174,4CZZY@85004,COG1088@1,COG1088@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily KDBPDICH_00398 547043.BIFPSEUDO_04157 2.6e-61 241.5 Bifidobacteriales Bacteria 2BH71@1,2IIPG@201174,32B89@2,4D0XE@85004 NA|NA|NA KDBPDICH_00399 547043.BIFPSEUDO_04158 1.1e-197 695.7 Bifidobacteriales ko:K02529,ko:K05499 ko00000,ko03000 Bacteria 2GNVD@201174,4D05Q@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_00400 547043.BIFPSEUDO_04159 5.5e-167 593.6 Bifidobacteriales iunH2 3.2.2.1 ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 R01245,R01273,R01677,R01770,R02143 RC00033,RC00063,RC00122,RC00318,RC00485 ko00000,ko00001,ko01000 Bacteria 2GP6N@201174,4CZ0Y@85004,COG1957@1,COG1957@2 NA|NA|NA F Inosine-uridine preferring nucleoside hydrolase KDBPDICH_00401 547043.BIFPSEUDO_04160 1.1e-259 902.1 Bifidobacteriales ko:K08168 M00704 ko00000,ko00002,ko01504,ko02000 2.A.1.3.16,2.A.1.3.22,2.A.1.3.6 Bacteria 2GJV6@201174,4CZH3@85004,COG0477@1,COG0477@2 NA|NA|NA EGP Major Facilitator Superfamily KDBPDICH_00402 547043.BIFPSEUDO_04161 1.3e-174 619.0 Bifidobacteriales rbsK 2.7.1.15 ko:K00852 ko00030,map00030 R01051,R02750 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 2I04R@201174,4CZIB@85004,COG0524@1,COG0524@2 NA|NA|NA H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway KDBPDICH_00403 547043.BIFPSEUDO_04162 3.3e-186 657.5 Bifidobacteriales prs GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006015,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0019637,GO:0019693,GO:0030145,GO:0030312,GO:0040007,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046390,GO:0046391,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901576 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ9S@201174,4CZPM@85004,COG0462@1,COG0462@2 NA|NA|NA F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) KDBPDICH_00404 1680.BADO_1535 2.5e-46 191.0 Bifidobacteriales rpsF GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0019843,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0071944,GO:0097159,GO:1901363,GO:1990904 ko:K02990 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 2IQHD@201174,4D10X@85004,COG0360@1,COG0360@2 NA|NA|NA J Binds together with S18 to 16S ribosomal RNA KDBPDICH_00405 547043.BIFPSEUDO_04164 9.7e-70 270.0 Bifidobacteriales ssb1 ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria 2GMM3@201174,4CZ5V@85004,COG0629@1,COG0629@2 NA|NA|NA L Single-stranded DNA-binding protein KDBPDICH_00406 547043.BIFPSEUDO_04165 3.5e-36 157.1 Bifidobacteriales rpsR GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02963,ko:K03111,ko:K15125 ko03010,ko03030,ko03430,ko03440,ko05133,map03010,map03030,map03430,map03440,map05133 M00178 br01610,ko00000,ko00001,ko00002,ko00536,ko03011,ko03029,ko03032,ko03400 Bacteria 2IQ92@201174,4D103@85004,COG0238@1,COG0238@2 NA|NA|NA J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit KDBPDICH_00407 547043.BIFPSEUDO_04166 1.7e-70 271.9 Bifidobacteriales rplI GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02939 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IKX7@201174,4D0P9@85004,COG0359@1,COG0359@2 NA|NA|NA J Binds to the 23S rRNA KDBPDICH_00409 547043.BIFPSEUDO_04172 9.2e-130 469.5 Bifidobacteriales gla ko:K02440 ko00000,ko02000 1.A.8.1,1.A.8.2 iHN637.CLJU_RS07630 Bacteria 2GKK3@201174,4CZ7F@85004,COG0580@1,COG0580@2 NA|NA|NA U Belongs to the MIP aquaporin (TC 1.A.8) family KDBPDICH_00410 1680.BADO_1541 4.2e-09 67.4 Bifidobacteriales Bacteria 2GMJR@201174,4D0RU@85004,COG5479@1,COG5479@2 NA|NA|NA M Protein of unknown function (DUF3152) KDBPDICH_00411 1680.BADO_1541 3.3e-54 217.6 Bifidobacteriales Bacteria 2GMJR@201174,4D0RU@85004,COG5479@1,COG5479@2 NA|NA|NA M Protein of unknown function (DUF3152) KDBPDICH_00412 547043.BIFPSEUDO_04176 5.3e-209 733.4 Bifidobacteriales gluQ 6.1.1.17 ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 Bacteria 2GKMT@201174,4CYRY@85004,COG0008@1,COG0008@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family KDBPDICH_00413 547043.BIFPSEUDO_04177 2.5e-80 304.7 Bifidobacteriales Bacteria 2AWBM@1,2IP6P@201174,31N7D@2,4D14B@85004 NA|NA|NA KDBPDICH_00414 547043.BIFPSEUDO_04178 1.4e-147 528.9 Bifidobacteriales yggS ko:K06997 ko00000 Bacteria 2GMRJ@201174,4CZUY@85004,COG0325@1,COG0325@2 NA|NA|NA S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis KDBPDICH_00415 547043.BIFPSEUDO_04179 1.4e-164 585.5 Bifidobacteriales fahA Bacteria 2GN2G@201174,4CZH5@85004,COG0179@1,COG0179@2 NA|NA|NA Q Fumarylacetoacetate (FAA) hydrolase family KDBPDICH_00416 547043.BIFPSEUDO_04180 0.0 1716.4 Bifidobacteriales clpB GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 ko:K03694,ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Bacteria 2GJ73@201174,4CZDY@85004,COG0542@1,COG0542@2 NA|NA|NA O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE KDBPDICH_00417 547043.BIFPSEUDO_04181 3e-135 488.0 Bifidobacteriales 3.6.3.3,3.6.3.5,3.6.3.54 ko:K01534,ko:K17686 ko01524,ko04016,map01524,map04016 R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5,3.A.3.6 Bacteria 2GM0U@201174,4CZ7S@85004,COG2217@1,COG2217@2 NA|NA|NA P Heavy metal translocating P-type atpase KDBPDICH_00418 547043.BIFPSEUDO_04183 2.8e-169 601.7 Bifidobacteriales rmuC ko:K09760 ko00000 Bacteria 2GP4U@201174,4CZA5@85004,COG1322@1,COG1322@2 NA|NA|NA S RmuC family KDBPDICH_00419 566552.BIFCAT_00272 1.2e-104 386.0 Bifidobacteriales pyrE 2.4.2.10 ko:K00762 ko00240,ko01100,map00240,map01100 M00051 R01870 RC00611 ko00000,ko00001,ko00002,ko01000 iJN678.umpS Bacteria 2HZDS@201174,4CZZ6@85004,COG0461@1,COG0461@2 NA|NA|NA F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) KDBPDICH_00420 1680.BADO_1554 3.1e-133 481.5 Bifidobacteriales spoU 2.1.1.185 ko:K03218,ko:K03437 ko00000,ko01000,ko03009,ko03016 Bacteria 2GM1A@201174,4CZE8@85004,COG0566@1,COG0566@2 NA|NA|NA J RNA methyltransferase TrmH family KDBPDICH_00421 401473.BDP_1991 6.2e-134 483.8 Bifidobacteriales Bacteria 2ICPH@201174,4CZJ7@85004,COG5340@1,COG5340@2 NA|NA|NA K Psort location Cytoplasmic, score KDBPDICH_00422 547043.BIFPSEUDO_04190 6.5e-46 189.9 Bifidobacteriales gatC GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.3.5.6,6.3.5.7 ko:K02435 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 Bacteria 2IQJN@201174,4D10U@85004,COG0721@1,COG0721@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) KDBPDICH_00423 547043.BIFPSEUDO_04191 5.5e-286 989.6 Bifidobacteriales gatA GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 ko:K02433 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 Bacteria 2GJK5@201174,4CZ1X@85004,COG0154@1,COG0154@2 NA|NA|NA F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) KDBPDICH_00424 547043.BIFPSEUDO_04192 8.7e-284 982.2 Bifidobacteriales gatB GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 ko:K02434 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 Bacteria 2GJJH@201174,4CYUY@85004,COG0064@1,COG0064@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) KDBPDICH_00425 547043.BIFPSEUDO_04193 2e-205 721.5 Bifidobacteriales 2.3.1.57 ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 M00135 R01154 RC00004,RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 2I2GV@201174,4CYPW@85004,COG1670@1,COG1670@2 NA|NA|NA J Acetyltransferase (GNAT) domain KDBPDICH_00426 547043.BIFPSEUDO_04195 2.1e-51 208.0 Bifidobacteriales GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 2AFXT@1,2IKPZ@201174,3161G@2,4D0UV@85004 NA|NA|NA S Protein of unknown function (DUF2469) KDBPDICH_00427 547043.BIFPSEUDO_04196 0.0 1099.7 Bifidobacteriales 5.4.99.9 ko:K01854 ko00052,ko00520,map00052,map00520 R00505,R09009 RC00317,RC02396 ko00000,ko00001,ko01000 Bacteria 2HZ9K@201174,4CZ3Z@85004,COG1232@1,COG1232@2 NA|NA|NA H Flavin containing amine oxidoreductase KDBPDICH_00428 547043.BIFPSEUDO_04198 1.9e-247 862.1 Bifidobacteriales rho GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006351,GO:0006353,GO:0006360,GO:0006363,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0018130,GO:0019438,GO:0030312,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K03628 ko03018,map03018 ko00000,ko00001,ko03019,ko03021 Bacteria 2GIWY@201174,4CZ2Z@85004,COG1158@1,COG1158@2 NA|NA|NA K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template KDBPDICH_00429 547043.BIFPSEUDO_04199 1.3e-79 302.4 Bifidobacteriales ko:K03719 ko00000,ko03000,ko03036 Bacteria 2GK3G@201174,4D0XT@85004,COG1522@1,COG1522@2 NA|NA|NA K helix_turn_helix ASNC type KDBPDICH_00430 547043.BIFPSEUDO_04200 3.9e-69 267.3 Bifidobacteriales tyrA 5.4.99.5 ko:K04092 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024,M00025 R01715 RC03116 ko00000,ko00001,ko00002,ko01000 Bacteria 2IQ46@201174,4D12A@85004,COG1605@1,COG1605@2 NA|NA|NA E Chorismate mutase type II KDBPDICH_00431 547043.BIFPSEUDO_04201 0.0 1167.1 Bifidobacteriales ko:K01421,ko:K21449 ko00000,ko02000 1.B.40.2 Bacteria 2I9PN@201174,4CZC2@85004,COG1511@1,COG1511@2 NA|NA|NA S domain protein KDBPDICH_00432 547043.BIFPSEUDO_04203 0.0 1857.8 Bifidobacteriales valS 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GK8H@201174,4CYVG@85004,COG0525@1,COG0525@2 NA|NA|NA J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner KDBPDICH_00433 547043.BIFPSEUDO_04204 1.9e-289 1001.1 Bifidobacteriales ko:K02035 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2GM5G@201174,4CYUZ@85004,COG0747@1,COG0747@2 NA|NA|NA E Bacterial extracellular solute-binding proteins, family 5 Middle KDBPDICH_00434 547043.BIFPSEUDO_04205 3.2e-123 447.6 Bifidobacteriales nth GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 2GJ01@201174,4CZ31@85004,COG0177@1,COG0177@2 NA|NA|NA L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate KDBPDICH_00435 547043.BIFPSEUDO_04206 4.9e-134 483.8 Bifidobacteriales Bacteria 2GJGU@201174,4CZB9@85004,COG0745@1,COG0745@2 NA|NA|NA KT Transcriptional regulatory protein, C terminal KDBPDICH_00436 547043.BIFPSEUDO_04207 4.9e-134 483.8 Bifidobacteriales Bacteria 2A0I6@1,2GJ8M@201174,30NNB@2,4D0ZN@85004 NA|NA|NA KDBPDICH_00437 547043.BIFPSEUDO_04208 5.5e-92 343.6 Bifidobacteriales mntP Bacteria 2GNBU@201174,4D01X@85004,COG1971@1,COG1971@2 NA|NA|NA P Probably functions as a manganese efflux pump KDBPDICH_00438 547043.BIFPSEUDO_03871 1.9e-129 468.4 Bifidobacteriales ko:K09384 ko00000 Bacteria 2HNSJ@201174,4CZG3@85004,COG3410@1,COG3410@2 NA|NA|NA L Uncharacterized conserved protein (DUF2075) KDBPDICH_00439 547043.BIFPSEUDO_03872 6.9e-167 593.2 Actinobacteria 3.1.21.3 ko:K01153,ko:K09384 ko00000,ko01000,ko02048 Bacteria 2I3FE@201174,COG0507@1,COG0507@2 NA|NA|NA L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD KDBPDICH_00440 547043.BIFPSEUDO_03874 1.5e-55 221.9 Bifidobacteriales mazG Bacteria 2IKRC@201174,4D155@85004,COG1694@1,COG1694@2 NA|NA|NA S MazG-like family KDBPDICH_00441 547043.BIFPSEUDO_03877 1.3e-43 181.8 Bifidobacteriales lexA 3.6.4.12 ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 2GNSZ@201174,4D09Q@85004,COG2865@1,COG2865@2 NA|NA|NA K Putative DNA-binding domain KDBPDICH_00442 547043.BIFPSEUDO_03879 2.4e-74 285.0 Bifidobacteriales Bacteria 28P4N@1,2IGYQ@201174,2ZBZT@2,4D06U@85004 NA|NA|NA S Putative inner membrane protein (DUF1819) KDBPDICH_00443 547043.BIFPSEUDO_03880 8.4e-23 112.1 Bifidobacteriales Bacteria 2EIY3@1,2GSK0@201174,33CP9@2,4D1FA@85004 NA|NA|NA KDBPDICH_00444 665950.HMPREF1025_01071 1.3e-226 792.0 unclassified Lachnospiraceae Bacteria 1TPCB@1239,2485Y@186801,27IJX@186928,COG0582@1,COG0582@2 NA|NA|NA L Phage integrase family KDBPDICH_00445 1121115.AXVN01000105_gene594 3.6e-31 140.2 Blautia Bacteria 1VABI@1239,24MZT@186801,2CCB2@1,32S7G@2,3Y0CD@572511 NA|NA|NA L Excisionase from transposon Tn916 KDBPDICH_00446 411460.RUMTOR_01830 1.2e-199 702.2 Blautia ko:K07467 ko00000 Bacteria 1UYFS@1239,24FME@186801,3XYRH@572511,COG2946@1,COG2946@2 NA|NA|NA L Psort location Cytoplasmic, score 8.87 KDBPDICH_00447 500632.CLONEX_01700 2.8e-109 401.4 Clostridia Bacteria 1VEKB@1239,24DSY@186801,COG1476@1,COG1476@2 NA|NA|NA K Cro/C1-type HTH DNA-binding domain KDBPDICH_00448 411470.RUMGNA_01145 2e-101 375.2 Blautia Bacteria 1UGU0@1239,25PDU@186801,2BGX7@1,32AX5@2,3Y19C@572511 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00449 658655.HMPREF0988_00008 1.8e-117 428.7 Clostridia Bacteria 1V84M@1239,24FBA@186801,2AXS4@1,31PT3@2 NA|NA|NA KDBPDICH_00450 655811.HMPREF0078_0560 9.2e-76 289.7 Firmicutes Bacteria 1VUVK@1239,2F29X@1,33V7W@2 NA|NA|NA KDBPDICH_00451 1050201.KB913034_gene1257 1.6e-44 186.0 Erysipelotrichia Bacteria 1VN3M@1239,2EMUW@1,33FH6@2,3VS33@526524 NA|NA|NA KDBPDICH_00452 742765.HMPREF9457_02035 2.2e-84 318.2 Dorea Bacteria 1V433@1239,25MW7@186801,27WT5@189330,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain KDBPDICH_00453 547043.BIFPSEUDO_03894 8.5e-128 463.0 Actinobacteria Bacteria 2GMRN@201174,COG0515@1,COG0515@2 NA|NA|NA KLT serine threonine protein kinase KDBPDICH_00454 547043.BIFPSEUDO_03895 1.6e-137 495.4 Actinobacteria 3.6.3.44 ko:K06147,ko:K06148,ko:K11085,ko:K16787,ko:K18104,ko:K18889 ko01501,ko02010,map01501,map02010 M00582,M00700,M00707 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 3.A.1,3.A.1.106,3.A.1.106.13,3.A.1.106.5,3.A.1.109,3.A.1.117,3.A.1.123,3.A.1.21,3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 2GITR@201174,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter KDBPDICH_00455 547043.BIFPSEUDO_03896 4.5e-158 563.9 Actinobacteria msbA2 3.6.3.44 ko:K06147,ko:K18104 ko01501,ko02010,map01501,map02010 M00700 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 3.A.1.106,3.A.1.109,3.A.1.117,3.A.1.123,3.A.1.21 Bacteria 2HBFJ@201174,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region KDBPDICH_00456 547043.BIFPSEUDO_03897 3e-159 567.8 Bifidobacteriales Bacteria 2GN3N@201174,4D0RC@85004,COG1651@1,COG1651@2 NA|NA|NA O Thioredoxin KDBPDICH_00457 547043.BIFPSEUDO_03898 7.6e-129 466.5 Bifidobacteriales Bacteria 2I61X@201174,4D2U1@85004,COG1246@1,COG1246@2 NA|NA|NA E Psort location Cytoplasmic, score 8.87 KDBPDICH_00458 547043.BIFPSEUDO_03899 2.7e-132 478.0 Bifidobacteriales yebE Bacteria 2GMGZ@201174,4D0BS@85004,COG1434@1,COG1434@2 NA|NA|NA S DUF218 domain KDBPDICH_00459 547043.BIFPSEUDO_03900 1.2e-231 808.9 Bifidobacteriales tig GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 ko:K03545 ko00000 Bacteria 2GJIG@201174,4CZ6P@85004,COG0544@1,COG0544@2 NA|NA|NA D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase KDBPDICH_00460 566552.BIFCAT_00579 2e-236 824.7 Bifidobacteriales rnd 3.1.13.5 ko:K03684 ko00000,ko01000,ko03016 Bacteria 2GKNM@201174,4CYUV@85004,COG0349@1,COG0349@2 NA|NA|NA J 3'-5' exonuclease KDBPDICH_00461 547043.BIFPSEUDO_03903 8.4e-79 300.1 Bifidobacteriales Bacteria 2B58P@1,2HZMM@201174,31Y2Q@2,4D0Y9@85004 NA|NA|NA S Protein of unknown function (DUF3000) KDBPDICH_00462 547043.BIFPSEUDO_03905 8.2e-165 586.3 Bifidobacteriales pflA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0018307,GO:0019538,GO:0033554,GO:0036211,GO:0043170,GO:0043364,GO:0043365,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070283,GO:0071704,GO:1901564 1.97.1.4 ko:K04069 R04710 ko00000,ko01000 iECOK1_1307.ECOK1_0925,iEcE24377_1341.EcE24377A_0980,iEcSMS35_1347.EcSMS35_2219,iYL1228.KPN_00930 Bacteria 2GN2B@201174,4CZ5Y@85004,COG1180@1,COG1180@2 NA|NA|NA C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine KDBPDICH_00463 547043.BIFPSEUDO_03906 0.0 1621.3 Bifidobacteriales pflB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006566,GO:0006567,GO:0006629,GO:0006631,GO:0006807,GO:0008150,GO:0008152,GO:0008861,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009987,GO:0016020,GO:0016054,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0016999,GO:0017144,GO:0019541,GO:0019752,GO:0032787,GO:0042737,GO:0043436,GO:0043875,GO:0044237,GO:0044238,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046459,GO:0070689,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.3.1.54 ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 iECH74115_1262.ECH74115_1064,iECIAI39_1322.ECIAI39_2245,iECSP_1301.ECSP_1007,iECs_1301.ECs0986,iEcSMS35_1347.EcSMS35_2218,iEcSMS35_1347.EcSMS35_3410,iG2583_1286.G2583_1138,iSDY_1059.SDY_2358,iZ_1308.Z1248 Bacteria 2GTTT@201174,4CZ59@85004,COG1882@1,COG1882@2 NA|NA|NA C Pyruvate formate lyase-like KDBPDICH_00464 547043.BIFPSEUDO_03907 4.5e-31 139.8 Bifidobacteriales Bacteria 2EHMB@1,2HZRX@201174,33BD3@2,4D1G1@85004 NA|NA|NA KDBPDICH_00465 547043.BIFPSEUDO_03908 0.0 1120.1 Bifidobacteriales nadE GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5,6.3.5.1 ko:K01916,ko:K01950 ko00760,ko01100,map00760,map01100 M00115 R00189,R00257 RC00010,RC00100 ko00000,ko00001,ko00002,ko01000 Bacteria 2GK2C@201174,4CZ14@85004,COG0171@1,COG0171@2,COG0388@1,COG0388@2 NA|NA|NA H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source KDBPDICH_00466 547043.BIFPSEUDO_03909 1.8e-225 788.1 Bifidobacteriales ko:K01436 ko00000,ko01000,ko01002 Bacteria 2GK05@201174,4CZC6@85004,COG1473@1,COG1473@2 NA|NA|NA S Peptidase dimerisation domain KDBPDICH_00467 547043.BIFPSEUDO_03910 1.7e-156 558.5 Bifidobacteriales Bacteria 2HZBH@201174,4CZIQ@85004,COG0561@1,COG0561@2 NA|NA|NA S Sucrose-6F-phosphate phosphohydrolase KDBPDICH_00468 547043.BIFPSEUDO_03911 1.9e-147 528.5 Bifidobacteriales metQ ko:K02073 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 2GMNI@201174,4CZNB@85004,COG1464@1,COG1464@2 NA|NA|NA P NLPA lipoprotein KDBPDICH_00469 547043.BIFPSEUDO_03912 5.5e-147 526.9 Bifidobacteriales metN ko:K02071 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 2GJ9P@201174,4CZYI@85004,COG1135@1,COG1135@2 NA|NA|NA P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system KDBPDICH_00470 547043.BIFPSEUDO_03913 5.4e-108 397.1 Bifidobacteriales metI ko:K02072 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 2GY65@201174,4CZWG@85004,COG2011@1,COG2011@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_00471 547043.BIFPSEUDO_03914 1.1e-74 285.8 Bifidobacteriales Bacteria 2ATF2@1,2IIKG@201174,31IYI@2,4D0ZG@85004 NA|NA|NA KDBPDICH_00472 566552.BIFCAT_00565 3.9e-16 90.9 Bifidobacteriales Bacteria 2B6YS@1,2H33B@201174,31ZYW@2,4D1XF@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00473 216816.GS08_05975 5.4e-127 460.3 Bifidobacteriales Bacteria 2HWAP@201174,4D0Z3@85004,COG4823@1,COG4823@2 NA|NA|NA V Abi-like protein KDBPDICH_00474 547043.BIFPSEUDO_03917 2.6e-29 134.0 Bifidobacteriales Bacteria 2B6YS@1,2H33B@201174,31ZYW@2,4D1XF@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00475 78346.BRUM_0079 2.6e-133 481.5 Bifidobacteriales insK GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 ko:K07497 ko00000 Bacteria 2H928@201174,4CZCP@85004,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain KDBPDICH_00476 702459.BBPR_0057 1.5e-269 934.9 Bifidobacteriales Bacteria 2IBDV@201174,4D0D7@85004,COG4584@1,COG4584@2 NA|NA|NA L PFAM Integrase catalytic KDBPDICH_00477 78345.BMERY_1180 7e-136 490.0 Bifidobacteriales Bacteria 2H714@201174,4CZRM@85004,COG1484@1,COG1484@2 NA|NA|NA L IstB-like ATP binding protein KDBPDICH_00478 547043.BIFPSEUDO_03919 1.3e-52 212.6 Bifidobacteriales Bacteria 2IF4K@201174,4D0JP@85004,COG2963@1,COG2963@2 NA|NA|NA L Helix-turn-helix domain KDBPDICH_00480 547043.BIFPSEUDO_03921 0.0 1606.3 Bifidobacteriales Bacteria 28KWM@1,2I981@201174,2ZACS@2,4D04V@85004 NA|NA|NA S LPXTG-motif cell wall anchor domain protein KDBPDICH_00481 547043.BIFPSEUDO_03922 1.4e-243 848.6 Bifidobacteriales dinF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03327 ko00000,ko02000 2.A.66.1 Bacteria 2GJE3@201174,4CZ75@85004,COG0534@1,COG0534@2 NA|NA|NA V MatE KDBPDICH_00482 547043.BIFPSEUDO_02914 1.2e-102 379.0 Bifidobacteriales ppiA GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030312,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0140096,GO:1901564 5.2.1.8 ko:K01802,ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 Bacteria 2IFUE@201174,4CZSU@85004,COG0652@1,COG0652@2 NA|NA|NA G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides KDBPDICH_00483 547043.BIFPSEUDO_02916 0.0 1530.4 Bifidobacteriales relA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009259,GO:0009260,GO:0009267,GO:0009405,GO:0009605,GO:0009987,GO:0009991,GO:0015968,GO:0015969,GO:0015970,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030145,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034035,GO:0034036,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042578,GO:0042594,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044419,GO:0044464,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051704,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.6.5,3.1.7.2 ko:K00951,ko:K01139 ko00230,map00230 R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 Bacteria 2GJYQ@201174,4CZCW@85004,COG0317@1,COG0317@2 NA|NA|NA KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance KDBPDICH_00484 547043.BIFPSEUDO_02917 1.3e-84 318.9 Bifidobacteriales dut GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 ko:K01520,ko:K13038 ko00240,ko00770,ko00983,ko01100,map00240,map00770,map00983,map01100 M00053,M00120 R02100,R03269,R04231,R11896 RC00002,RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 2IHYY@201174,4CZUJ@85004,COG0756@1,COG0756@2 NA|NA|NA F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA KDBPDICH_00485 547043.BIFPSEUDO_02918 1e-47 195.7 Bifidobacteriales Bacteria 2ATJW@1,2I80Y@201174,3361K@2,4D10Y@85004 NA|NA|NA S Domain of unknown function (DUF4193) KDBPDICH_00486 547043.BIFPSEUDO_02919 4.1e-147 527.7 Bifidobacteriales Bacteria 29W72@1,2HZB4@201174,30HS9@2,4CZFJ@85004 NA|NA|NA S Protein of unknown function (DUF3071) KDBPDICH_00487 547043.BIFPSEUDO_02920 3e-234 817.4 Bifidobacteriales Bacteria 2GISU@201174,4CZCK@85004,COG1524@1,COG1524@2 NA|NA|NA S Type I phosphodiesterase / nucleotide pyrophosphatase KDBPDICH_00488 547043.BIFPSEUDO_02921 0.0 1662.9 Bifidobacteriales gyrA GO:0005575,GO:0005622,GO:0005623,GO:0009330,GO:0032991,GO:0044424,GO:0044464 5.99.1.3 ko:K02469,ko:K02621 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 2GJ2Q@201174,4CYVH@85004,COG0188@1,COG0188@2 NA|NA|NA L DNA topoisomerase (ATP-hydrolyzing) KDBPDICH_00489 547043.BIFPSEUDO_02922 0.0 3028.8 Bifidobacteriales lhr GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 ko:K03724 ko00000,ko01000,ko03400 Bacteria 2GJG3@201174,4D01F@85004,COG1201@1,COG1201@2 NA|NA|NA L DEAD DEAH box helicase KDBPDICH_00490 547043.BIFPSEUDO_02923 2.2e-31 141.0 Bifidobacteriales yozG ko:K07727 ko00000,ko03000 Bacteria 2GQZM@201174,4D1EQ@85004,COG3655@1,COG3655@2 NA|NA|NA K Cro/C1-type HTH DNA-binding domain KDBPDICH_00491 547043.BIFPSEUDO_02924 2.7e-78 298.1 Bifidobacteriales Bacteria 2DU83@1,2IMPR@201174,33PAY@2,4D19W@85004 NA|NA|NA S Protein of unknown function (DUF2975) KDBPDICH_00492 547043.BIFPSEUDO_02926 4.8e-241 840.1 Bifidobacteriales Bacteria 2I4ZW@201174,4CZGX@85004,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor KDBPDICH_00493 547043.BIFPSEUDO_02927 1.5e-222 778.5 Bifidobacteriales Bacteria 2HWKN@201174,4CYRZ@85004,COG0738@1,COG0738@2 NA|NA|NA G Major Facilitator Superfamily KDBPDICH_00494 547043.BIFPSEUDO_02928 0.0 1521.9 Bifidobacteriales gyrB2 5.99.1.3 ko:K02470 ko00000,ko01000,ko03032,ko03400 Bacteria 2GM1E@201174,4CYXR@85004,COG0187@1,COG0187@2 NA|NA|NA L DNA topoisomerase (ATP-hydrolyzing) KDBPDICH_00495 547043.BIFPSEUDO_02929 9.7e-173 613.2 Bifidobacteriales sigA ko:K03086 ko00000,ko03021 Bacteria 2GK3Z@201174,4CZQC@85004,COG0568@1,COG0568@2 NA|NA|NA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth KDBPDICH_00496 547043.BIFPSEUDO_02930 1.1e-118 432.6 Bifidobacteriales Bacteria 2B5AP@1,2IF9M@201174,31Y4U@2,4D15J@85004 NA|NA|NA KDBPDICH_00497 547043.BIFPSEUDO_02931 1.7e-196 691.8 Bifidobacteriales crtE 2.5.1.1,2.5.1.10,2.5.1.29 ko:K13787,ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00365,M00366 R01658,R02003,R02061 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 2GJEK@201174,4CZQV@85004,COG0142@1,COG0142@2 NA|NA|NA H Belongs to the FPP GGPP synthase family KDBPDICH_00498 547043.BIFPSEUDO_02932 0.0 1305.8 Bifidobacteriales pknL 2.7.11.1 ko:K12132 ko00000,ko01000,ko01001 Bacteria 2GJ1J@201174,4CYTR@85004,COG0515@1,COG0515@2,COG2815@1,COG2815@2 NA|NA|NA KLT PASTA KDBPDICH_00499 547043.BIFPSEUDO_02682 2.1e-144 518.5 Bifidobacteriales ko:K02077 M00244 ko00000,ko00002,ko02000 3.A.1.15 Bacteria 2GM1K@201174,4CZ99@85004,COG0803@1,COG0803@2 NA|NA|NA P Zinc-uptake complex component A periplasmic KDBPDICH_00500 547043.BIFPSEUDO_02681 3e-246 857.4 Bifidobacteriales pbuO ko:K06901 ko00000,ko02000 2.A.1.40 Bacteria 2GKYD@201174,4CZHD@85004,COG2252@1,COG2252@2 NA|NA|NA S Permease family KDBPDICH_00501 401473.BDP_0394 1.1e-87 329.3 Bifidobacteriales rplJ GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02864,ko:K02935 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GM0V@201174,4CZFP@85004,COG0244@1,COG0244@2 NA|NA|NA J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors KDBPDICH_00502 401473.BDP_0395 2.4e-36 158.3 Bifidobacteriales rplL GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 ko:K02935 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IKNW@201174,4D0W2@85004,COG0222@1,COG0222@2 NA|NA|NA J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation KDBPDICH_00503 547043.BIFPSEUDO_02677 3.3e-176 624.8 Bifidobacteriales Bacteria 2GIT6@201174,4CYX9@85004,COG1716@1,COG1716@2 NA|NA|NA T Forkhead associated domain KDBPDICH_00504 547043.BIFPSEUDO_02676 0.0 2275.0 Bifidobacteriales Bacteria 2GKJW@201174,4CYY9@85004,COG1112@1,COG1112@2 NA|NA|NA L Superfamily I DNA and RNA helicases and helicase subunits KDBPDICH_00505 566552.BIFCAT_01589 4.8e-36 156.8 Bifidobacteriales Bacteria 2B18D@1,2GSR6@201174,31TNU@2,4D1ET@85004 NA|NA|NA KDBPDICH_00506 566552.BIFCAT_01588 4.2e-92 344.4 Bifidobacteriales flgA GO:0001539,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 ko:K02279,ko:K02386 ko02040,map02040 ko00000,ko00001,ko02035,ko02044 Bacteria 2IIYF@201174,4D0YD@85004,COG1261@1,COG1261@2 NA|NA|NA NO SAF KDBPDICH_00507 547043.BIFPSEUDO_02673 6.1e-30 136.0 Bifidobacteriales fmdB Bacteria 2IQHE@201174,4D1ES@85004,COG2331@1,COG2331@2 NA|NA|NA S Putative regulatory protein KDBPDICH_00508 547043.BIFPSEUDO_02672 1.6e-100 372.5 Bifidobacteriales fthC 6.3.3.2 ko:K01934 ko00670,ko01100,map00670,map01100 R02301 RC00183 ko00000,ko00001,ko01000 Bacteria 2IKWR@201174,4D12B@85004,COG0212@1,COG0212@2 NA|NA|NA H 5-formyltetrahydrofolate cyclo-ligase family KDBPDICH_00509 547043.BIFPSEUDO_02671 6.7e-113 413.3 Bifidobacteriales rimJ 2.3.1.128 ko:K03790 ko00000,ko01000,ko03009 Bacteria 2HAFI@201174,4CZRR@85004,COG1670@1,COG1670@2 NA|NA|NA J Acetyltransferase (GNAT) domain KDBPDICH_00510 547043.BIFPSEUDO_02670 1.8e-146 525.8 Bifidobacteriales Bacteria 2E03N@1,2GQE4@201174,32VSG@2,4CYUX@85004 NA|NA|NA KDBPDICH_00511 1680.BADO_0302 2.5e-46 191.0 Bifidobacteriales groS GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0035375,GO:0035966,GO:0040007,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046872,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K04078 ko00000,ko03029,ko03110 Bacteria 2IKTH@201174,4D101@85004,COG0234@1,COG0234@2 NA|NA|NA O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter KDBPDICH_00515 1437600.JDUI01000014_gene1019 5.5e-25 119.4 Bifidobacteriales rpmG ko:K02913 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GQFG@201174,4D1EA@85004,COG0267@1,COG0267@2 NA|NA|NA J Ribosomal protein L33 KDBPDICH_00516 566552.BIFCAT_01577 1.7e-205 721.8 Bifidobacteriales murB GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008360,GO:0008762,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0022603,GO:0022604,GO:0030203,GO:0034645,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0048037,GO:0050660,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0055114,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 iECED1_1282.ECED1_4683,iECUMN_1333.ECUMN_4498_AT6,iLF82_1304.LF82_1416,iNRG857_1313.NRG857_19845 Bacteria 2GIV2@201174,4CZSJ@85004,COG0812@1,COG0812@2 NA|NA|NA M Cell wall formation KDBPDICH_00517 547043.BIFPSEUDO_02661 2.8e-266 924.1 Bifidobacteriales ko:K03294 ko00000 2.A.3.2 Bacteria 2GJ75@201174,4CYZA@85004,COG0531@1,COG0531@2 NA|NA|NA E aromatic amino acid transport protein AroP K03293 KDBPDICH_00518 547043.BIFPSEUDO_02660 8.3e-59 232.6 Bifidobacteriales fdxA ko:K05524 ko00000 Bacteria 2IKVN@201174,4D11B@85004,COG1146@1,COG1146@2 NA|NA|NA C 4Fe-4S binding domain KDBPDICH_00519 547043.BIFPSEUDO_02659 1.3e-210 738.8 Bifidobacteriales dapC Bacteria 2GJMI@201174,4CZ91@85004,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase class I and II KDBPDICH_00521 566552.BIFCAT_01573 0.0 1122.5 Bifidobacteriales ko:K02035 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2GNKN@201174,4D0JU@85004,COG0747@1,COG0747@2 NA|NA|NA E Bacterial extracellular solute-binding proteins, family 5 Middle KDBPDICH_00522 547043.BIFPSEUDO_02657 7.7e-180 636.3 Bifidobacteriales ko:K02033 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2GM72@201174,4D009@85004,COG0601@1,COG0601@2 NA|NA|NA EP Binding-protein-dependent transport system inner membrane component KDBPDICH_00523 78344.BIGA_1424 3.9e-141 507.7 Bifidobacteriales ko:K02034 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2I2WP@201174,4D2RU@85004,COG1173@1,COG1173@2 NA|NA|NA EP Binding-protein-dependent transport system inner membrane component KDBPDICH_00524 547043.BIFPSEUDO_02655 6.7e-156 556.6 Bifidobacteriales oppD ko:K02031,ko:K02032,ko:K02034 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2GIXV@201174,4D0C4@85004,COG0444@1,COG0444@2 NA|NA|NA EP Oligopeptide/dipeptide transporter, C-terminal region KDBPDICH_00525 547043.BIFPSEUDO_02654 2.8e-151 541.2 Bifidobacteriales dppF ko:K02032 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2H4BW@201174,4CYW7@85004,COG4608@1,COG4608@2 NA|NA|NA E ABC transporter KDBPDICH_00526 547043.BIFPSEUDO_02653 0.0 1168.3 Bifidobacteriales xynB 3.2.1.37 ko:K01198 ko00520,ko01100,map00520,map01100 R01433 RC00467 ko00000,ko00001,ko01000 GH43 Bacteria 2GIW3@201174,4CZ5I@85004,COG3507@1,COG3507@2 NA|NA|NA G Belongs to the glycosyl hydrolase 43 family KDBPDICH_00527 1680.BADO_0308 0.0 1427.2 Bifidobacteriales Bacteria 2HT29@201174,4CZ28@85004,COG1653@1,COG1653@2 NA|NA|NA G Psort location Cytoplasmic, score 8.87 KDBPDICH_00528 547043.BIFPSEUDO_02650 1.3e-231 808.5 Bifidobacteriales 3.2.1.156 ko:K15531 ko00000,ko01000 GH8 Bacteria 2IA68@201174,4CZYP@85004,COG3405@1,COG3405@2 NA|NA|NA G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238 KDBPDICH_00529 547043.BIFPSEUDO_02649 0.0 1119.4 Bifidobacteriales Bacteria 2GIW3@201174,4D08K@85004,COG3507@1,COG3507@2 NA|NA|NA G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238 KDBPDICH_00530 566552.BIFCAT_01562 6.2e-295 1019.2 Bifidobacteriales ko:K03929 ko00000,ko01000 CE10 Bacteria 2GJCN@201174,4D02Y@85004,COG2272@1,COG2272@2 NA|NA|NA I Belongs to the type-B carboxylesterase lipase family KDBPDICH_00532 547043.BIFPSEUDO_02645 1.3e-222 778.9 Bifidobacteriales dinB 2.7.7.7 ko:K02346 ko00000,ko01000,ko03400 Bacteria 2GKBI@201174,4CZHT@85004,COG0389@1,COG0389@2 NA|NA|NA L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII KDBPDICH_00533 547043.BIFPSEUDO_02644 2.3e-251 874.4 Bifidobacteriales ko:K07282 ko00000 Bacteria 2GK15@201174,4D081@85004,COG2843@1,COG2843@2 NA|NA|NA M Bacterial capsule synthesis protein PGA_cap KDBPDICH_00534 547043.BIFPSEUDO_02643 2.7e-185 654.4 Bifidobacteriales MA20_16500 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GKTT@201174,4CZRS@85004,COG0111@1,COG0111@2 NA|NA|NA EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family KDBPDICH_00535 547043.BIFPSEUDO_02642 2.1e-114 418.3 Bifidobacteriales yigZ 2.1.1.45,3.4.13.9 ko:K00560,ko:K01271 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 2GMM4@201174,4CZH8@85004,COG1739@1,COG1739@2 NA|NA|NA S Uncharacterized protein family UPF0029 KDBPDICH_00536 547043.BIFPSEUDO_02641 6.9e-122 443.4 Bifidobacteriales Bacteria 2BMRI@1,2GMIA@201174,32GAY@2,4CZFZ@85004 NA|NA|NA KDBPDICH_00537 547043.BIFPSEUDO_02640 0.0 1469.9 Bifidobacteriales malQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.4.1.18,2.4.1.25,3.2.1.196,5.4.99.15 ko:K00700,ko:K00705,ko:K02438,ko:K06044 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R01824,R02110,R02111,R05196,R09995 RC00049 ko00000,ko00001,ko00002,ko01000,ko04147 CBM48,GH13,GH77 iJN678.malQ Bacteria 2GM5Z@201174,4CZC7@85004,COG1640@1,COG1640@2 NA|NA|NA G 4-alpha-glucanotransferase KDBPDICH_00538 547043.BIFPSEUDO_02639 2.4e-80 304.7 Bifidobacteriales rplM GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02871 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IFG1@201174,4D0PV@85004,COG0102@1,COG0102@2 NA|NA|NA J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly KDBPDICH_00539 547043.BIFPSEUDO_02638 3.4e-67 261.2 Bifidobacteriales rpsI GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02996 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GNDY@201174,4CZ9Y@85004,COG0103@1,COG0103@2 NA|NA|NA J Belongs to the universal ribosomal protein uS9 family KDBPDICH_00540 547043.BIFPSEUDO_02637 0.0 1713.4 Bifidobacteriales glgX 3.2.1.196,3.2.1.68 ko:K01214,ko:K02438 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02111,R09995,R11261 ko00000,ko00001,ko00002,ko01000 CBM48,GH13 Bacteria 2GJ00@201174,4CYZ1@85004,COG1523@1,COG1523@2 NA|NA|NA G Belongs to the glycosyl hydrolase 13 family KDBPDICH_00541 547043.BIFPSEUDO_02635 1.4e-76 292.0 Bifidobacteriales 4.4.1.5 ko:K01759 ko00620,map00620 R02530 RC00004,RC00740 ko00000,ko00001,ko01000 Bacteria 2IHBC@201174,4D0P3@85004,COG0346@1,COG0346@2 NA|NA|NA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KDBPDICH_00542 547043.BIFPSEUDO_02634 1.1e-214 752.3 Bifidobacteriales 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 2I7R8@201174,4CZZ7@85004,COG1940@1,COG1940@2 NA|NA|NA GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565 KDBPDICH_00543 547043.BIFPSEUDO_02633 1.3e-235 822.0 Bifidobacteriales iYL1228.KPN_02541 Bacteria 2GPRH@201174,4D048@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_00544 547043.BIFPSEUDO_02632 9.5e-197 692.6 Bifidobacteriales Z012_01000 1.1.1.14,1.1.1.9 ko:K00008,ko:K05351 ko00040,ko00051,ko01100,map00040,map00051,map01100 M00014 R00875,R01896 RC00085,RC00102 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKC7@201174,4D04X@85004,COG1063@1,COG1063@2 NA|NA|NA C Zinc-binding dehydrogenase KDBPDICH_00545 547043.BIFPSEUDO_02631 7.3e-183 646.4 Bifidobacteriales rhaR_1 Bacteria 2HZE7@201174,4D00U@85004,COG2207@1,COG2207@2 NA|NA|NA K helix_turn_helix, arabinose operon control protein KDBPDICH_00546 547043.BIFPSEUDO_02630 0.0 1802.3 Bifidobacteriales adhE 1.1.1.1,1.2.1.10 ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 R00228,R00623,R00754,R01172,R04880,R05233,R05234,R06917,R06927 RC00004,RC00050,RC00088,RC00099,RC00116,RC00184,RC00649,RC01195 ko00000,ko00001,ko01000 iSB619.SA_RS00885 Bacteria 2GJI2@201174,4CZ8F@85004,COG1012@1,COG1012@2,COG1454@1,COG1454@2 NA|NA|NA C belongs to the iron- containing alcohol dehydrogenase family KDBPDICH_00547 1435051.BMOU_1705 5.2e-50 203.4 Bifidobacteriales rpsJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02946 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IHRA@201174,4D0UT@85004,COG0051@1,COG0051@2 NA|NA|NA J Involved in the binding of tRNA to the ribosomes KDBPDICH_00548 547043.BIFPSEUDO_02627 2.3e-116 424.9 Bifidobacteriales rplC GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015934,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031323,GO:0031325,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000232,GO:2000234 ko:K02906 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GJXT@201174,4CYQD@85004,COG0087@1,COG0087@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit KDBPDICH_00549 547043.BIFPSEUDO_02626 1.4e-116 425.6 Bifidobacteriales rplD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02926 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GJYJ@201174,4CZSA@85004,COG0088@1,COG0088@2 NA|NA|NA J Forms part of the polypeptide exit tunnel KDBPDICH_00550 1435051.BMOU_1708 6.8e-47 193.0 Bifidobacteriales rplW GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02892 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IQ7V@201174,4D11N@85004,COG0089@1,COG0089@2 NA|NA|NA J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome KDBPDICH_00551 547043.BIFPSEUDO_02624 6.1e-154 550.1 Bifidobacteriales rplB GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02886 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GK7R@201174,4CZ5U@85004,COG0090@1,COG0090@2 NA|NA|NA J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity KDBPDICH_00552 1435051.BMOU_1710 1.3e-47 195.3 Bifidobacteriales rpsS GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02965 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IKMS@201174,4D105@85004,COG0185@1,COG0185@2 NA|NA|NA J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA KDBPDICH_00553 1680.BADO_0333 1.9e-56 224.9 Bifidobacteriales rplV GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02890 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IM3J@201174,4D0UZ@85004,COG0091@1,COG0091@2 NA|NA|NA J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome KDBPDICH_00554 401473.BDP_0437 1e-97 363.2 Bifidobacteriales rpsC GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02982 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GKF1@201174,4CYQN@85004,COG0092@1,COG0092@2 NA|NA|NA J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation KDBPDICH_00555 1680.BADO_0335 1.7e-75 288.5 Bifidobacteriales rplP GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02878 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IFEI@201174,4D0Q8@85004,COG0197@1,COG0197@2 NA|NA|NA J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs KDBPDICH_00556 547043.BIFPSEUDO_02619 5e-38 163.3 Bifidobacteriales rpmC GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02904 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IQ6V@201174,4D181@85004,COG0255@1,COG0255@2 NA|NA|NA J Belongs to the universal ribosomal protein uL29 family KDBPDICH_00557 78346.BRUM_0723 4.9e-41 173.3 Bifidobacteriales rpsQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02961 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IQ68@201174,4D10N@85004,COG0186@1,COG0186@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA KDBPDICH_00558 1437600.JDUI01000009_gene353 3e-60 237.7 Bifidobacteriales rplN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02874 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IHNX@201174,4D0VI@85004,COG0093@1,COG0093@2 NA|NA|NA J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome KDBPDICH_00559 1680.BADO_0339 8.7e-51 206.1 Bifidobacteriales rplX GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02895 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IKP2@201174,4D10I@85004,COG0198@1,COG0198@2 NA|NA|NA J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit KDBPDICH_00560 547043.BIFPSEUDO_02615 7.5e-103 379.8 Bifidobacteriales rplE GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02931 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GJW7@201174,4CZCA@85004,COG0094@1,COG0094@2 NA|NA|NA J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits KDBPDICH_00561 1435051.BMOU_1719 8.9e-29 132.1 Bifidobacteriales rpsN GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02954 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IQ8R@201174,4D177@85004,COG0199@1,COG0199@2 NA|NA|NA J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site KDBPDICH_00562 1435051.BMOU_1720 5.5e-68 263.5 Bifidobacteriales rpsH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 ko:K02994 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IHQZ@201174,4D0P6@85004,COG0096@1,COG0096@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit KDBPDICH_00563 547043.BIFPSEUDO_02612 3.8e-96 357.5 Bifidobacteriales rplF GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02933 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GK35@201174,4CYQV@85004,COG0097@1,COG0097@2 NA|NA|NA J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center KDBPDICH_00564 547043.BIFPSEUDO_02611 3.3e-59 234.2 Bifidobacteriales rplR GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02881 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IKTX@201174,4D0WE@85004,COG0256@1,COG0256@2 NA|NA|NA J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance KDBPDICH_00565 547043.BIFPSEUDO_02610 1.2e-92 346.3 Bifidobacteriales rpsE GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 ko:K02988 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GJW8@201174,4CZCD@85004,COG0098@1,COG0098@2 NA|NA|NA J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body KDBPDICH_00566 547043.BIFPSEUDO_02609 3.4e-25 120.2 Bifidobacteriales rpmD GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02907 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GQV0@201174,4D1EZ@85004,COG1841@1,COG1841@2 NA|NA|NA J Ribosomal protein L30p/L7e KDBPDICH_00567 547043.BIFPSEUDO_02608 3.7e-73 280.8 Bifidobacteriales rplO GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02876 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2II6M@201174,4D0R9@85004,COG0200@1,COG0200@2 NA|NA|NA J binds to the 23S rRNA KDBPDICH_00568 471855.Shel_27760 3.2e-114 418.3 Coriobacteriia ko:K07133 ko00000 Bacteria 2HJ52@201174,4CUSM@84998,COG1373@1,COG1373@2 NA|NA|NA S Domain of unknown function (DUF4143) KDBPDICH_00569 1122939.ATUD01000017_gene4027 2.8e-92 345.1 Actinobacteria Bacteria 2I8MZ@201174,COG1028@1,COG1028@2 NA|NA|NA IQ Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis KDBPDICH_00570 78346.BRUM_1716 3.1e-145 521.2 Bifidobacteriales ko:K16957 ko02010,map02010 M00585 ko00000,ko00001,ko00002,ko02000 3.A.1.3.13 Bacteria 2IBGH@201174,4D2UM@85004,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial periplasmic substrate-binding proteins KDBPDICH_00571 78346.BRUM_1715 1.9e-116 425.2 Bifidobacteriales ytmL ko:K02029,ko:K10009,ko:K16958,ko:K16959 ko02010,map02010 M00234,M00236,M00585 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.10,3.A.1.3.13,3.A.1.3.14 Bacteria 2IJQ6@201174,4D2SQ@85004,COG0765@1,COG0765@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_00572 78346.BRUM_1714 1.1e-116 426.0 Bifidobacteriales ko:K16959,ko:K16962 ko02010,map02010 M00585,M00586 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.13 Bacteria 2IH6I@201174,4D1A4@85004,COG0765@1,COG0765@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_00573 78346.BRUM_1713 1.4e-89 335.5 Bifidobacteriales Bacteria 299ND@1,2IPBZ@201174,2ZWQQ@2,4D26W@85004 NA|NA|NA S L-2-amino-thiazoline-4-carboxylic acid hydrolase KDBPDICH_00574 78346.BRUM_1712 3.6e-124 451.1 Bifidobacteriales 3.6.3.21 ko:K02028,ko:K10010,ko:K16960 ko02010,map02010 M00234,M00236,M00585 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.10,3.A.1.3.13,3.A.1.3.14 Bacteria 2GIZW@201174,4D0TB@85004,COG1126@1,COG1126@2 NA|NA|NA E ATPases associated with a variety of cellular activities KDBPDICH_00575 78346.BRUM_1338 7.8e-81 307.4 Bifidobacteriales pknD ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 2GJQW@201174,4CZ6H@85004,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter, substrate-binding protein, family 3 KDBPDICH_00576 216816.GS08_02845 2.9e-91 342.0 Bifidobacteriales iaaA 3.4.19.5,3.5.1.1 ko:K01424,ko:K13051 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 R00485 RC00010,RC02798 ko00000,ko00001,ko01000,ko01002 Bacteria 2IDMF@201174,4D073@85004,COG1446@1,COG1446@2 NA|NA|NA E Asparaginase KDBPDICH_00577 356829.BITS_0733 2.8e-07 61.6 Bifidobacteriales Bacteria 2B9UA@1,2H7TH@201174,32376@2,4D2D3@85004 NA|NA|NA KDBPDICH_00578 566552.BIFCAT_01119 4.9e-110 403.7 Bifidobacteriales dcd GO:0003674,GO:0003824,GO:0004170,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0015949,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0033973,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 ko:K01494 ko00240,ko01100,map00240,map01100 M00053 R00568,R02325 RC00074 ko00000,ko00001,ko00002,ko01000 iPC815.YPO1525 Bacteria 2GKQQ@201174,4CZEB@85004,COG0717@1,COG0717@2 NA|NA|NA F Belongs to the dCTP deaminase family KDBPDICH_00579 566552.BIFCAT_01120 2.3e-150 538.1 Bifidobacteriales ypfH GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0052689 ko:K06999 ko00000 Bacteria 2I5NR@201174,4CZJQ@85004,COG0400@1,COG0400@2 NA|NA|NA S Phospholipase/Carboxylesterase KDBPDICH_00580 566552.BIFCAT_01121 0.0 1198.0 Bifidobacteriales yjcE GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006873,GO:0006885,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0034220,GO:0035725,GO:0042592,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098719,GO:0098739,GO:0098771,GO:0099516,GO:0099587,GO:1902600 ko:K03316 ko00000 2.A.36 Bacteria 2GIUT@201174,4CZC4@85004,COG0025@1,COG0025@2 NA|NA|NA P Sodium/hydrogen exchanger family KDBPDICH_00581 547043.BIFPSEUDO_04457 3.8e-82 310.8 Bifidobacteriales tadA 3.5.4.1,3.5.4.33,3.8.1.5,6.3.4.19 ko:K01485,ko:K01563,ko:K04075,ko:K11991 ko00240,ko00330,ko00361,ko00625,ko01100,ko01120,map00240,map00330,map00361,map00625,map01100,map01120 R00974,R01411,R02922,R05284,R05367,R05368,R05369,R05370,R07669,R07670,R09597,R10223 RC00074,RC00477,RC00514,RC00809,RC01317,RC01340,RC01341,RC02013,RC02633,RC02634 ko00000,ko00001,ko01000,ko03016 Bacteria 2IM3Z@201174,4D0V0@85004,COG0590@1,COG0590@2 NA|NA|NA FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) KDBPDICH_00582 547043.BIFPSEUDO_04459 0.0 1585.9 Bifidobacteriales 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 Bacteria 2GJJ1@201174,4CZJB@85004,COG3345@1,COG3345@2 NA|NA|NA G Glycosyl hydrolase family 36 N-terminal domain KDBPDICH_00583 547043.BIFPSEUDO_04460 1.8e-231 808.1 Bifidobacteriales nagC GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 ko:K02565 ko00000,ko03000 Bacteria 2GMBH@201174,4CZK4@85004,COG1846@1,COG1846@2,COG1940@1,COG1940@2 NA|NA|NA GK ROK family KDBPDICH_00584 547043.BIFPSEUDO_04461 5.4e-242 843.2 Bifidobacteriales msmE7 ko:K10117 ko02010,map02010 M00196 ko00000,ko00001,ko00002,ko02000 3.A.1.1.28 Bacteria 2GN9T@201174,4CZ4V@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_00585 1435051.BMOU_2098 1.2e-158 565.8 Bifidobacteriales ko:K10118,ko:K15771 ko02010,map02010 M00196,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2GKJI@201174,4CZPG@85004,COG1175@1,COG1175@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_00586 1680.BADO_1678 8e-160 569.7 Bifidobacteriales ko:K10119 ko02010,map02010 M00196 ko00000,ko00001,ko00002,ko02000 3.A.1.1.28 Bacteria 2GNQW@201174,4D02Q@85004,COG0395@1,COG0395@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_00588 1435051.BMOU_2100 6.9e-27 126.7 Bifidobacteriales Bacteria 2GJBJ@201174,4D00W@85004,COG1609@1,COG1609@2 NA|NA|NA K Periplasmic binding protein-like domain KDBPDICH_00589 547043.BIFPSEUDO_04464 0.0 1265.8 Bifidobacteriales 3.2.1.10 ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 R00801,R01718,R01791,R06199 RC00028,RC00059,RC00077,RC00451 ko00000,ko00001,ko01000 GH13 Bacteria 2GKS4@201174,4CZT7@85004,COG0366@1,COG0366@2 NA|NA|NA G Alpha amylase, catalytic domain protein KDBPDICH_00590 566552.BIFCAT_01113 4.7e-230 803.5 Bifidobacteriales tdcB GO:0003674,GO:0003824,GO:0003941,GO:0004793,GO:0004794,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006565,GO:0006566,GO:0006567,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016597,GO:0016829,GO:0016830,GO:0016832,GO:0016840,GO:0016841,GO:0019752,GO:0019842,GO:0030170,GO:0031406,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJAG@201174,4CYW0@85004,COG1171@1,COG1171@2 NA|NA|NA E Pyridoxal-phosphate dependent enzyme KDBPDICH_00591 566552.BIFCAT_01114 2.4e-144 518.1 Bifidobacteriales cobB2 ko:K12410 ko00000,ko01000 Bacteria 2GJI3@201174,4CYUW@85004,COG0846@1,COG0846@2 NA|NA|NA K Sir2 family KDBPDICH_00592 547043.BIFPSEUDO_03248 7.3e-194 683.3 Bifidobacteriales Bacteria 2AZ7Y@1,2GPBK@201174,31REU@2,4D1AQ@85004 NA|NA|NA KDBPDICH_00593 547043.BIFPSEUDO_03249 6.9e-141 506.5 Bifidobacteriales Bacteria 2HWAP@201174,4D0Z3@85004,COG4823@1,COG4823@2 NA|NA|NA V Abi-like protein KDBPDICH_00594 547043.BIFPSEUDO_03251 7.8e-52 209.5 Bifidobacteriales Bacteria 2GITX@201174,4D0JX@85004,COG3274@1,COG3274@2 NA|NA|NA S enterobacterial common antigen metabolic process KDBPDICH_00595 547043.BIFPSEUDO_03251 7e-69 266.5 Bifidobacteriales Bacteria 2GITX@201174,4D0JX@85004,COG3274@1,COG3274@2 NA|NA|NA S enterobacterial common antigen metabolic process KDBPDICH_00596 1414720.CBYM010000033_gene1953 4.4e-16 92.0 Clostridiaceae pslL ko:K21005 ko02025,map02025 ko00000,ko00001 Bacteria 1VJ6T@1239,24S0B@186801,36MVS@31979,COG3594@1,COG3594@2 NA|NA|NA G Acyltransferase family KDBPDICH_00597 326426.Bbr_0450 1.9e-176 625.2 Bifidobacteriales wzy ko:K19419 ko00000,ko02000 9.B.183.1.9 Bacteria 2DR4Q@1,2H1FR@201174,33A5I@2,4D1P6@85004 NA|NA|NA S EpsG family KDBPDICH_00599 547043.BIFPSEUDO_03256 1.5e-194 685.3 Bifidobacteriales 1.13.11.79 ko:K04719 ko00740,ko01100,map00740,map01100 R09083 RC00435,RC02413 ko00000,ko00001,ko01000 Bacteria 2IE9H@201174,4CZI3@85004,COG0778@1,COG0778@2 NA|NA|NA C Psort location Cytoplasmic, score 8.87 KDBPDICH_00600 547043.BIFPSEUDO_03257 1.2e-210 738.8 Bifidobacteriales Bacteria 2IC1G@201174,4D09D@85004,COG2327@1,COG2327@2 NA|NA|NA S Polysaccharide pyruvyl transferase KDBPDICH_00601 326426.Bbr_0446 2.7e-110 404.8 Bifidobacteriales Bacteria 2IKA9@201174,4D1Y9@85004,COG0110@1,COG0110@2 NA|NA|NA H Hexapeptide repeat of succinyl-transferase KDBPDICH_00602 547043.BIFPSEUDO_03259 9.5e-197 692.6 Bifidobacteriales Bacteria 2I2EQ@201174,4D2X1@85004,COG1216@1,COG1216@2 NA|NA|NA S Glycosyltransferase like family 2 KDBPDICH_00603 547043.BIFPSEUDO_03260 1.3e-249 868.6 Bifidobacteriales cps2J Bacteria 2I9QU@201174,4D0AU@85004,COG2244@1,COG2244@2 NA|NA|NA S Polysaccharide biosynthesis protein KDBPDICH_00604 547043.BIFPSEUDO_03261 5.5e-239 833.2 Bifidobacteriales MA20_17390 ko:K03867 ko00000,ko01000,ko01003 GT4 Bacteria 2HZCM@201174,4CZSE@85004,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 KDBPDICH_00605 547043.BIFPSEUDO_03262 2.3e-204 718.0 Bifidobacteriales ko:K19424 ko00000,ko01000,ko01003 GT4 Bacteria 2GNR8@201174,4D0M2@85004,COG0438@1,COG0438@2 NA|NA|NA M Psort location Cytoplasmic, score 8.87 KDBPDICH_00606 547043.BIFPSEUDO_03264 7.2e-214 749.6 Bifidobacteriales Bacteria 2IBM0@201174,4CZE4@85004,COG0438@1,COG0438@2 NA|NA|NA M Domain of unknown function (DUF1972) KDBPDICH_00607 547043.BIFPSEUDO_03265 1.4e-214 752.3 Bifidobacteriales Bacteria 2GM53@201174,4D0F1@85004,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferase 4-like domain KDBPDICH_00608 180332.JTGN01000005_gene3056 1.9e-50 206.8 Clostridia Bacteria 1UBCE@1239,24DYC@186801,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferase 4-like domain KDBPDICH_00609 742818.HMPREF9451_00530 1.8e-91 342.8 Coriobacteriia epsJ GO:0003674,GO:0003824,GO:0016740,GO:0016757 ko:K19427 ko00000,ko01000 GT2 Bacteria 2I2EQ@201174,4CUME@84998,COG1216@1,COG1216@2 NA|NA|NA S Glycosyltransferase, group 2 family protein KDBPDICH_00610 1437609.BCAL_0931 6.4e-97 361.3 Actinobacteria Bacteria 2AH6X@1,2H9Q9@201174,317GS@2 NA|NA|NA S Psort location CytoplasmicMembrane, score KDBPDICH_00611 1437609.BCAL_0932 1.5e-85 323.2 Actinobacteria Bacteria 2I2H4@201174,COG1215@1,COG1215@2 NA|NA|NA M Glycosyltransferase like family 2 KDBPDICH_00612 547043.BIFPSEUDO_03269 3.2e-125 454.9 Bifidobacteriales Bacteria 28PSK@1,2IBFI@201174,2ZCE3@2,4D059@85004 NA|NA|NA KDBPDICH_00613 547043.BIFPSEUDO_03270 2.2e-83 315.5 Bifidobacteriales Bacteria 2IKA9@201174,4D1UT@85004,COG0110@1,COG0110@2 NA|NA|NA S Hexapeptide repeat of succinyl-transferase KDBPDICH_00614 1437609.BCAL_0935 2.7e-128 465.7 Bifidobacteriales Bacteria 2IA1K@201174,4D0KU@85004,COG2244@1,COG2244@2 NA|NA|NA S Psort location CytoplasmicMembrane, score 9.99 KDBPDICH_00615 1499684.CCNP01000020_gene2607 1.7e-46 193.0 Clostridiaceae Bacteria 1VAMZ@1239,25BN8@186801,36WJQ@31979,COG0463@1,COG0463@2 NA|NA|NA M Glycosyltransferase like family 2 KDBPDICH_00616 702459.BBPR_0057 4.7e-142 510.8 Bifidobacteriales Bacteria 2IBDV@201174,4D0D7@85004,COG4584@1,COG4584@2 NA|NA|NA L PFAM Integrase catalytic KDBPDICH_00617 566552.BIFCAT_01439 8.2e-84 316.2 Bifidobacteriales Bacteria 2AWVC@1,2IPYB@201174,31NSP@2,4D15U@85004 NA|NA|NA K Cro/C1-type HTH DNA-binding domain KDBPDICH_00618 566552.BIFCAT_01438 0.0 1869.7 Bifidobacteriales pacL2 3.6.3.8 ko:K01537 ko00000,ko01000 3.A.3.2 Bacteria 2GJJC@201174,4CZ1I@85004,COG0474@1,COG0474@2 NA|NA|NA P Cation transporter/ATPase, N-terminus KDBPDICH_00619 566552.BIFCAT_01436 1.6e-120 439.1 Bifidobacteriales Bacteria 2H3AT@201174,4D00R@85004,COG3247@1,COG3247@2 NA|NA|NA S Short repeat of unknown function (DUF308) KDBPDICH_00620 566552.BIFCAT_01435 2.6e-13 80.1 Bifidobacteriales Bacteria 2B4NV@1,2GYXI@201174,31XF4@2,4D1TF@85004 NA|NA|NA S Psort location Extracellular, score 8.82 KDBPDICH_00621 566552.BIFCAT_01433 9.2e-221 772.7 Bifidobacteriales Bacteria 2GJU2@201174,4CZVY@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_00622 566552.BIFCAT_01432 2.2e-174 618.2 Bifidobacteriales rlmB GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 ko:K03218,ko:K03437 ko00000,ko01000,ko03009,ko03016 Bacteria 2GJMR@201174,4CZB1@85004,COG0566@1,COG0566@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family KDBPDICH_00623 566552.BIFCAT_01431 1.4e-281 974.9 Bifidobacteriales Bacteria 2I2F0@201174,4CZ2E@85004,COG0515@1,COG0515@2 NA|NA|NA KLT Domain of unknown function (DUF4032) KDBPDICH_00624 547043.BIFPSEUDO_03195 1.6e-210 738.4 Bifidobacteriales ugpC ko:K10112 ko02010,map02010 M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606 ko00000,ko00001,ko00002,ko02000 3.A.1.1 Bacteria 2GJCM@201174,4CYU6@85004,COG3842@1,COG3842@2 NA|NA|NA E Belongs to the ABC transporter superfamily KDBPDICH_00625 566552.BIFCAT_01428 6.3e-131 473.4 Bifidobacteriales Bacteria 2GKK5@201174,4CZAU@85004,COG3279@1,COG3279@2 NA|NA|NA K LytTr DNA-binding domain KDBPDICH_00626 566552.BIFCAT_01427 2.1e-135 488.4 Bifidobacteriales Bacteria 2IAW1@201174,4CZ3D@85004,COG3290@1,COG3290@2 NA|NA|NA T GHKL domain KDBPDICH_00627 566552.BIFCAT_01426 7.3e-213 746.5 Bifidobacteriales clcA_2 ko:K03281 ko00000 2.A.49 Bacteria 2GPPN@201174,4CZPX@85004,COG0038@1,COG0038@2 NA|NA|NA P Voltage gated chloride channel KDBPDICH_00628 566552.BIFCAT_01425 2e-47 194.9 Bifidobacteriales ko:K07133 ko00000 Bacteria 2GK4E@201174,4CZX6@85004,COG1373@1,COG1373@2 NA|NA|NA S Psort location Cytoplasmic, score KDBPDICH_00629 547043.BIFPSEUDO_03202 7.6e-138 496.5 Bifidobacteriales Bacteria 2EUBW@1,2ICS5@201174,33MU8@2,4D08R@85004 NA|NA|NA KDBPDICH_00630 702459.BBPR_1820 2.2e-174 618.2 Bifidobacteriales 3.4.22.70 ko:K07284 ko00000,ko01000,ko01002,ko01011 Bacteria 2GNWT@201174,4CZMM@85004,COG3764@1,COG3764@2 NA|NA|NA M Sortase family KDBPDICH_00631 547043.BIFPSEUDO_03204 1.5e-244 852.0 Bifidobacteriales Bacteria 2H1EY@201174,4D00Q@85004,COG4932@1,COG4932@2 NA|NA|NA M LPXTG-motif cell wall anchor domain protein KDBPDICH_00632 547043.BIFPSEUDO_03205 0.0 4690.6 Bifidobacteriales Bacteria 2CBRJ@1,2GKSC@201174,2Z7W0@2,4CZAS@85004 NA|NA|NA S LPXTG-motif cell wall anchor domain protein KDBPDICH_00634 566552.BIFCAT_01614 8.5e-91 339.7 Bifidobacteriales lemA ko:K03744 ko00000 Bacteria 2GPS4@201174,4CZE2@85004,COG1704@1,COG1704@2 NA|NA|NA S LemA family KDBPDICH_00635 547043.BIFPSEUDO_02702 0.0 1098.6 Bifidobacteriales Bacteria 2HZD2@201174,4CZV5@85004,COG4907@1,COG4907@2 NA|NA|NA S Predicted membrane protein (DUF2207) KDBPDICH_00636 547043.BIFPSEUDO_02701 9.7e-171 605.9 Bifidobacteriales 1.1.1.65 ko:K05275 ko00750,ko01100,ko01120,map00750,map01100,map01120 R01708 RC00116 ko00000,ko00001,ko01000 Bacteria 2GJ6R@201174,4CZB6@85004,COG0667@1,COG0667@2 NA|NA|NA C Oxidoreductase, aldo keto reductase family protein KDBPDICH_00637 566552.BIFCAT_01611 7e-297 1025.8 Bifidobacteriales yegQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Bacteria 2GKTB@201174,4CZA1@85004,COG0826@1,COG0826@2 NA|NA|NA O Peptidase family U32 C-terminal domain KDBPDICH_00638 566552.BIFCAT_01610 1.4e-184 652.1 Bifidobacteriales yfiH GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0030312,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0055114,GO:0071944 ko:K05810 ko00000,ko01000 Bacteria 2GN1M@201174,4CZBI@85004,COG1496@1,COG1496@2 NA|NA|NA Q Multi-copper polyphenol oxidoreductase laccase KDBPDICH_00639 547043.BIFPSEUDO_02697 2.5e-144 518.1 Bifidobacteriales ispD GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016114,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046490,GO:0046872,GO:0046914,GO:0050518,GO:0051483,GO:0051484,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.405,2.7.7.40,2.7.7.60,4.6.1.12 ko:K00991,ko:K12506,ko:K21681 ko00040,ko00900,ko01100,ko01110,ko01130,map00040,map00900,map01100,map01110,map01130 M00096 R01525,R02921,R05633,R05637 RC00002,RC00089,RC01440 ko00000,ko00001,ko00002,ko01000 Bacteria 2GNHP@201174,4CYVZ@85004,COG1211@1,COG1211@2 NA|NA|NA I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) KDBPDICH_00640 566552.BIFCAT_01608 3.4e-126 457.6 Bifidobacteriales pcp GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:1901564 3.4.19.3 ko:K01304 ko00000,ko01000,ko01002 Bacteria 2GN39@201174,4CZ57@85004,COG2039@1,COG2039@2 NA|NA|NA O Removes 5-oxoproline from various penultimate amino acid residues except L-proline KDBPDICH_00641 547043.BIFPSEUDO_02695 3.8e-58 232.6 Bifidobacteriales Bacteria 2HZ99@201174,4CZ0S@85004,COG1196@1,COG1196@2 NA|NA|NA D nuclear chromosome segregation KDBPDICH_00642 566552.BIFCAT_01606 2.5e-266 924.1 Bifidobacteriales pepC GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.4.22.40 ko:K01372 ko00000,ko01000,ko01002 Bacteria 2GNYU@201174,4CZDZ@85004,COG3579@1,COG3579@2 NA|NA|NA E Peptidase C1-like family KDBPDICH_00643 547043.BIFPSEUDO_02693 9.7e-211 739.2 Bifidobacteriales aroG GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2375,iAPECO1_1312.APECO1_3932,iECNA114_1301.ECNA114_0684,iECOK1_1307.ECOK1_2946,iECS88_1305.ECS88_2787,iECSF_1327.ECSF_0680,iEcSMS35_1347.EcSMS35_0777,iHN637.CLJU_RS07240,iLF82_1304.LF82_0146,iNRG857_1313.NRG857_03335,iSbBS512_1146.SbBS512_E1908,iUMN146_1321.UM146_03705,iUTI89_1310.UTI89_C2934,iYL1228.KPN_00758 Bacteria 2GMVF@201174,4CZMR@85004,COG0722@1,COG0722@2 NA|NA|NA E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) KDBPDICH_00644 547043.BIFPSEUDO_02692 1.3e-221 775.4 Bifidobacteriales aroG GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2375,iAPECO1_1312.APECO1_3932,iECNA114_1301.ECNA114_0684,iECOK1_1307.ECOK1_2946,iECS88_1305.ECS88_2787,iECSF_1327.ECSF_0680,iEcSMS35_1347.EcSMS35_0777,iHN637.CLJU_RS07240,iLF82_1304.LF82_0146,iNRG857_1313.NRG857_03335,iSbBS512_1146.SbBS512_E1908,iUMN146_1321.UM146_03705,iUTI89_1310.UTI89_C2934,iYL1228.KPN_00758 Bacteria 2GMVF@201174,4CZ7I@85004,COG0722@1,COG0722@2 NA|NA|NA E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) KDBPDICH_00645 566552.BIFCAT_01603 1.8e-122 445.3 Bifidobacteriales mtnN 3.2.2.9 ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 M00034,M00609 R00194,R01401 RC00063,RC00318 ko00000,ko00001,ko00002,ko01000 Bacteria 2I8GZ@201174,4CYTM@85004,COG0775@1,COG0775@2 NA|NA|NA E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively KDBPDICH_00646 566552.BIFCAT_01602 9e-219 766.1 Bifidobacteriales senX3 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009405,GO:0009987,GO:0016020,GO:0016310,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0051704,GO:0071704,GO:0071944,GO:1901564 2.7.13.3 ko:K07636,ko:K07768,ko:K11383 ko02020,map02020 M00434,M00443,M00505 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 2GJY7@201174,4CZ42@85004,COG5002@1,COG5002@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain KDBPDICH_00647 547043.BIFPSEUDO_02689 3.4e-129 467.6 Bifidobacteriales Bacteria 2GKFS@201174,4CZTX@85004,COG0745@1,COG0745@2 NA|NA|NA KT Transcriptional regulatory protein, C terminal KDBPDICH_00648 566552.BIFCAT_01600 1.8e-196 691.8 Bifidobacteriales pstS ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 2GJXD@201174,4CYTZ@85004,COG0226@1,COG0226@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import KDBPDICH_00649 547043.BIFPSEUDO_02686 1.7e-163 582.0 Bifidobacteriales pstC GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0009314,GO:0009628,GO:0010921,GO:0015698,GO:0016020,GO:0016021,GO:0019220,GO:0019222,GO:0031224,GO:0031226,GO:0031323,GO:0034220,GO:0035303,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051174,GO:0051179,GO:0051234,GO:0051336,GO:0055085,GO:0065007,GO:0065009,GO:0071944,GO:0098656,GO:0098660,GO:0098661 ko:K02037,ko:K02038 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 iAF987.Gmet_2702,ic_1306.c4652 Bacteria 2GJDA@201174,4CYV0@85004,COG0573@1,COG0573@2 NA|NA|NA P probably responsible for the translocation of the substrate across the membrane KDBPDICH_00650 547043.BIFPSEUDO_02685 4e-168 597.4 Bifidobacteriales pstA GO:0003674,GO:0005215,GO:0005315,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0010921,GO:0015291,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0019220,GO:0019222,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0031323,GO:0033554,GO:0034220,GO:0035303,GO:0035435,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051174,GO:0051179,GO:0051234,GO:0051336,GO:0051716,GO:0055085,GO:0065007,GO:0065009,GO:0071944,GO:0098656,GO:0098660,GO:0098661 ko:K02037,ko:K02038 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 iJN746.PP_2658,iPC815.YPO4115,iYL1228.KPN_04131,iZ_1308.Z5217 Bacteria 2I2F2@201174,4D2UW@85004,COG0581@1,COG0581@2 NA|NA|NA P Phosphate transport system permease KDBPDICH_00651 1435051.BMOU_1668 3.6e-148 530.8 Bifidobacteriales pstB 3.6.3.27 ko:K02036 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 Bacteria 2GJQ3@201174,4CYVE@85004,COG1117@1,COG1117@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system KDBPDICH_00652 547043.BIFPSEUDO_03298 5.2e-184 650.2 Bifidobacteriales Bacteria 2GJDS@201174,4D0SN@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_00653 547043.BIFPSEUDO_03297 4.3e-68 263.8 Bifidobacteriales ko:K02027 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2I3BP@201174,4CZDQ@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_00654 547043.BIFPSEUDO_03297 1.3e-139 502.3 Bifidobacteriales ko:K02027 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2I3BP@201174,4CZDQ@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_00655 547043.BIFPSEUDO_03296 1.4e-162 578.9 Bifidobacteriales ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2GJGB@201174,4D084@85004,COG1175@1,COG1175@2 NA|NA|NA G PFAM binding-protein-dependent transport systems inner membrane component KDBPDICH_00656 547043.BIFPSEUDO_03295 6.6e-145 520.0 Bifidobacteriales ko:K02026 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2GNGG@201174,4CZP2@85004,COG0395@1,COG0395@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_00657 547043.BIFPSEUDO_03294 0.0 1460.7 Bifidobacteriales 3.2.1.177 ko:K01811 ko00000,ko01000 GH31 Bacteria 2GP4V@201174,4D005@85004,COG1501@1,COG1501@2 NA|NA|NA G Belongs to the glycosyl hydrolase 31 family KDBPDICH_00658 547043.BIFPSEUDO_03292 1.1e-54 219.2 Bifidobacteriales yccF Bacteria 2IKS5@201174,4D11K@85004,COG3304@1,COG3304@2 NA|NA|NA S Inner membrane component domain KDBPDICH_00659 78344.BIGA_1478 4.1e-152 544.3 Bifidobacteriales Bacteria 2GJG9@201174,4D03W@85004,COG4823@1,COG4823@2 NA|NA|NA V Abi-like protein KDBPDICH_00660 216816.GS08_00895 1.9e-08 64.3 Bifidobacteriales Bacteria 2GM8F@201174,4D023@85004,COG3328@1,COG3328@2 NA|NA|NA L Transposase, Mutator family KDBPDICH_00661 398513.BBNG_00796 4.3e-100 373.2 Actinobacteria Bacteria 2GJSP@201174,COG0846@1,COG0846@2 NA|NA|NA K SIR2-like domain KDBPDICH_00662 216816.GS08_01605 1.5e-78 298.9 Bifidobacteriales tnp3503b 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 2IEJD@201174,4CZ5C@85004,COG3677@1,COG3677@2 NA|NA|NA L Transposase and inactivated derivatives KDBPDICH_00663 216816.GS08_01605 6e-78 297.0 Bifidobacteriales tnp3503b 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 2IEJD@201174,4CZ5C@85004,COG3677@1,COG3677@2 NA|NA|NA L Transposase and inactivated derivatives KDBPDICH_00664 452863.Achl_4600 1.2e-65 257.3 Actinobacteria ko:K18831 ko00000,ko02048,ko03000 Bacteria 2GRH0@201174,COG2856@1,COG2856@2 NA|NA|NA K Helix-turn-helix domain protein KDBPDICH_00665 452863.Achl_4599 5.2e-10 71.6 Actinobacteria Bacteria 2DQPA@1,2GUJI@201174,337WJ@2 NA|NA|NA KDBPDICH_00666 401473.BDP_0120 2.9e-08 63.5 Bifidobacteriales Bacteria 2IF4K@201174,4D0JP@85004,COG2963@1,COG2963@2 NA|NA|NA L Helix-turn-helix domain KDBPDICH_00667 78346.BRUM_0813 4.3e-19 100.1 Bifidobacteriales Bacteria 2IF4K@201174,4D0JP@85004,COG2963@1,COG2963@2 NA|NA|NA L Helix-turn-helix domain KDBPDICH_00668 78345.BMERY_1180 4.6e-49 200.3 Bifidobacteriales Bacteria 2H714@201174,4CZRM@85004,COG1484@1,COG1484@2 NA|NA|NA L IstB-like ATP binding protein KDBPDICH_00669 702459.BBPR_0057 1.6e-42 178.7 Bifidobacteriales Bacteria 2IBDV@201174,4D0D7@85004,COG4584@1,COG4584@2 NA|NA|NA L PFAM Integrase catalytic KDBPDICH_00670 547043.BIFPSEUDO_02933 4.3e-132 477.2 Bifidobacteriales plsC2 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 2GJ6V@201174,4CZBB@85004,COG0204@1,COG0204@2 NA|NA|NA I Phosphate acyltransferases KDBPDICH_00671 547043.BIFPSEUDO_02934 1.3e-97 362.5 Bifidobacteriales Bacteria 2AP35@1,2IBUY@201174,31E4N@2,4D0R7@85004 NA|NA|NA KDBPDICH_00672 547043.BIFPSEUDO_02936 3.4e-194 684.1 Bifidobacteriales trpD GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 Bacteria 2GM4G@201174,4CZKZ@85004,COG0547@1,COG0547@2 NA|NA|NA F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) KDBPDICH_00673 547043.BIFPSEUDO_02937 0.0 1884.0 Bifidobacteriales secA GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030312,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 2GIRT@201174,4CYX6@85004,COG0653@1,COG0653@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane KDBPDICH_00674 547043.BIFPSEUDO_02938 3.3e-118 431.0 Bifidobacteriales hpf GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 ko:K05808 ko00000,ko03009 Bacteria 2GMYF@201174,4CZ3H@85004,COG1544@1,COG1544@2 NA|NA|NA J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase KDBPDICH_00675 547043.BIFPSEUDO_02940 1.5e-121 442.2 Bifidobacteriales recX GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03565 ko00000,ko03400 Bacteria 2INKM@201174,4D0Y4@85004,COG2137@1,COG2137@2 NA|NA|NA S Modulates RecA activity KDBPDICH_00676 547043.BIFPSEUDO_02941 5.4e-212 743.4 Bifidobacteriales recA GO:0000150,GO:0000166,GO:0000287,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009650,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0031668,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042148,GO:0042221,GO:0042623,GO:0043142,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 ko:K03553 ko03440,map03440 M00729 ko00000,ko00001,ko00002,ko03400 Bacteria 2GJ4P@201174,4CYYY@85004,COG0468@1,COG0468@2 NA|NA|NA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage KDBPDICH_00677 547043.BIFPSEUDO_02942 4.3e-46 190.3 Bifidobacteriales Bacteria 2EFU9@1,2GQJW@201174,339KE@2,4D16T@85004 NA|NA|NA S Protein of unknown function (DUF3046) KDBPDICH_00678 547043.BIFPSEUDO_02943 1.6e-80 305.4 Bifidobacteriales Bacteria 2I2G5@201174,4D0PT@85004,COG1426@1,COG1426@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins KDBPDICH_00679 547043.BIFPSEUDO_02944 6.1e-97 360.1 Bifidobacteriales cinA 3.5.1.42 ko:K03742,ko:K03743 ko00760,map00760 R02322 RC00100 ko00000,ko00001,ko01000 Bacteria 2IQ8T@201174,4D0CM@85004,COG1546@1,COG1546@2 NA|NA|NA S Belongs to the CinA family KDBPDICH_00680 547043.BIFPSEUDO_02945 4.1e-124 450.7 Bifidobacteriales pgsA GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 R01801,R02030 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 Bacteria 2GK5D@201174,4CZ36@85004,COG0558@1,COG0558@2 NA|NA|NA I Belongs to the CDP-alcohol phosphatidyltransferase class-I family KDBPDICH_00681 547043.BIFPSEUDO_02946 0.0 1797.3 Bifidobacteriales ftsK GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 ko:K03466 ko00000,ko03036 3.A.12 Bacteria 2GK3T@201174,4CZ5T@85004,COG1674@1,COG1674@2 NA|NA|NA D FtsK SpoIIIE family protein KDBPDICH_00682 547043.BIFPSEUDO_02947 1.9e-192 678.3 Bifidobacteriales miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008033,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016070,GO:0016740,GO:0016765,GO:0019222,GO:0031323,GO:0031326,GO:0032268,GO:0033554,GO:0034248,GO:0034470,GO:0034605,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0043555,GO:0044237,GO:0044238,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051716,GO:0052381,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1990497,GO:2000112,GO:2000765 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 Bacteria 2GKFT@201174,4CZNS@85004,COG0324@1,COG0324@2 NA|NA|NA F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) KDBPDICH_00683 547043.BIFPSEUDO_02948 3.9e-281 973.4 Bifidobacteriales miaB 2.8.4.3 ko:K06168 R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 Bacteria 2GJEV@201174,4CZFB@85004,COG0621@1,COG0621@2 NA|NA|NA H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine KDBPDICH_00684 547043.BIFPSEUDO_02949 4.2e-155 553.9 Bifidobacteriales relA2 2.7.6.5 ko:K07816 ko00230,map00230 R00429 RC00002,RC00078 ko00000,ko00001,ko01000 Bacteria 2GKF8@201174,4CYXP@85004,COG2357@1,COG2357@2 NA|NA|NA S Region found in RelA / SpoT proteins KDBPDICH_00685 547043.BIFPSEUDO_02950 6.2e-177 626.7 Bifidobacteriales ydeD Bacteria 2I8X5@201174,4D0BH@85004,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family KDBPDICH_00686 547043.BIFPSEUDO_02951 8.6e-116 423.3 Bifidobacteriales ybhL GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K06890 ko00000 Bacteria 2I98Y@201174,4CZIJ@85004,COG0670@1,COG0670@2 NA|NA|NA S Belongs to the BI1 family KDBPDICH_00687 547043.BIFPSEUDO_02952 6.7e-60 237.7 Bifidobacteriales Bacteria 2EGCD@1,2HZ8E@201174,33A46@2,4CYRF@85004 NA|NA|NA S Domain of unknown function (DUF5067) KDBPDICH_00688 547043.BIFPSEUDO_02953 5.1e-243 846.7 Bifidobacteriales Bacteria 2GNBG@201174,4CZG6@85004,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase KDBPDICH_00689 547043.BIFPSEUDO_02954 1.8e-127 461.8 Bifidobacteriales Bacteria 2GN80@201174,4CZRF@85004,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon KDBPDICH_00690 547043.BIFPSEUDO_02955 0.0 1385.2 Bifidobacteriales Bacteria 2I99F@201174,4CZ4G@85004,COG1479@1,COG1479@2 NA|NA|NA S Protein of unknown function DUF262 KDBPDICH_00691 547043.BIFPSEUDO_02956 9e-116 422.9 Bifidobacteriales Bacteria 2IBZ9@201174,4D07J@85004,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon KDBPDICH_00692 547043.BIFPSEUDO_02957 1.2e-244 852.0 Bifidobacteriales Bacteria 2I9G4@201174,4CZHY@85004,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase KDBPDICH_00693 547043.BIFPSEUDO_02958 3.7e-190 670.6 Bifidobacteriales ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GIY8@201174,4CYUQ@85004,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities KDBPDICH_00694 566552.BIFCAT_00509 2.1e-219 768.1 Bifidobacteriales ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 2IBJP@201174,4CZD5@85004,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 family transporter protein KDBPDICH_00695 566552.BIFCAT_00508 9.9e-228 795.8 Bifidobacteriales ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 2H9HW@201174,4CZ1J@85004,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 family transporter protein KDBPDICH_00696 566552.BIFCAT_00507 1.2e-181 642.5 Bifidobacteriales Bacteria 2I2G7@201174,4D06R@85004,COG2207@1,COG2207@2 NA|NA|NA K helix_turn_helix, arabinose operon control protein KDBPDICH_00697 566552.BIFCAT_00506 5.1e-108 397.1 Bifidobacteriales maa 2.3.1.18,2.3.1.79 ko:K00633,ko:K00661 ko00000,ko01000 Bacteria 2GNUB@201174,4CZ5K@85004,COG0110@1,COG0110@2 NA|NA|NA S Bacterial transferase hexapeptide repeat protein KDBPDICH_00698 566552.BIFCAT_00505 2.4e-248 864.4 Bifidobacteriales VP1224 Bacteria 2HZA6@201174,4CZ8I@85004,COG0534@1,COG0534@2 NA|NA|NA V Psort location CytoplasmicMembrane, score 9.99 KDBPDICH_00699 547043.BIFPSEUDO_02964 0.0 1811.6 Bifidobacteriales acnA GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008198,GO:0009060,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015980,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0030312,GO:0030350,GO:0032787,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 2GJD5@201174,4CZ3T@85004,COG1048@1,COG1048@2 NA|NA|NA C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate KDBPDICH_00700 547043.BIFPSEUDO_02965 0.0 1590.5 Bifidobacteriales ctpE GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 ko:K12952 ko00000,ko01000 3.A.3.23 Bacteria 2GJJC@201174,4CYS1@85004,COG0474@1,COG0474@2 NA|NA|NA P E1-E2 ATPase KDBPDICH_00701 547043.BIFPSEUDO_02966 2e-74 285.0 Bifidobacteriales Bacteria 2AVVG@1,2INFG@201174,31MP9@2,4D12J@85004 NA|NA|NA KDBPDICH_00702 547043.BIFPSEUDO_02967 2.8e-243 847.4 Bifidobacteriales trmA GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0019843,GO:0030488,GO:0030696,GO:0030697,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.190,2.1.1.35 ko:K00557,ko:K03215 ko00000,ko01000,ko03009,ko03016 Bacteria 2GIR3@201174,4CYYN@85004,COG2265@1,COG2265@2 NA|NA|NA J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family KDBPDICH_00703 547043.BIFPSEUDO_02968 2.4e-133 481.5 Bifidobacteriales Bacteria 2AVV0@1,2GJKP@201174,31MNQ@2,4CYQX@85004 NA|NA|NA S Protein of unknown function (DUF3159) KDBPDICH_00704 547043.BIFPSEUDO_02969 1.7e-151 542.0 Bifidobacteriales Bacteria 28J4D@1,2GJYC@201174,2Z90C@2,4CZG1@85004 NA|NA|NA S Protein of unknown function (DUF3710) KDBPDICH_00705 547043.BIFPSEUDO_02970 1.4e-172 612.1 Bifidobacteriales exoA 3.1.11.2 ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 2GKIS@201174,4CYVB@85004,COG0708@1,COG0708@2 NA|NA|NA L Endonuclease/Exonuclease/phosphatase family KDBPDICH_00706 547043.BIFPSEUDO_02971 0.0 1315.1 Bifidobacteriales dppD ko:K02031,ko:K02032 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2GIXV@201174,4D2V0@85004,COG0444@1,COG0444@2,COG1123@1,COG4172@2 NA|NA|NA EP Oligopeptide/dipeptide transporter, C-terminal region KDBPDICH_00707 547043.BIFPSEUDO_02972 1.4e-170 605.5 Bifidobacteriales dppC ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 2GJ9E@201174,4CYQF@85004,COG1173@1,COG1173@2 NA|NA|NA EP N-terminal TM domain of oligopeptide transport permease C KDBPDICH_00708 547043.BIFPSEUDO_02973 6.2e-155 553.5 Bifidobacteriales dppB ko:K02033,ko:K13890,ko:K15581,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00348,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.11,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 2GJ2C@201174,4CZSV@85004,COG0601@1,COG0601@2 NA|NA|NA EP Binding-protein-dependent transport system inner membrane component KDBPDICH_00709 566552.BIFCAT_00494 1.5e-305 1054.7 Bifidobacteriales ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 2GIUH@201174,4CZFK@85004,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substrate-binding protein, family 5 KDBPDICH_00710 566552.BIFCAT_00493 8e-171 606.3 Bifidobacteriales xerC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03733,ko:K04763 ko00000,ko03036 Bacteria 2GNDP@201174,4CZCX@85004,COG4974@1,COG4974@2 NA|NA|NA D Belongs to the 'phage' integrase family. XerC subfamily KDBPDICH_00711 566552.BIFCAT_00492 3.7e-34 150.2 Bifidobacteriales Bacteria 2BGJ3@1,2IR91@201174,32AHC@2,4D17H@85004 NA|NA|NA KDBPDICH_00712 566552.BIFCAT_00491 6.4e-193 679.9 Bifidobacteriales tyrA GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12,1.3.1.43 ko:K00210,ko:K00220,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00025,M00040 R00732,R01728 RC00125 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKB4@201174,4CYV2@85004,COG0287@1,COG0287@2 NA|NA|NA E Prephenate dehydrogenase KDBPDICH_00713 566552.BIFCAT_00490 8.2e-190 669.5 Bifidobacteriales pheA 1.3.1.12,4.2.1.51,5.4.99.5 ko:K04517,ko:K04518,ko:K14170 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00024,M00025 R00691,R01373,R01715,R01728 RC00125,RC00360,RC03116 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJQ5@201174,4CZ61@85004,COG0077@1,COG0077@2 NA|NA|NA E Prephenate dehydratase KDBPDICH_00714 566552.BIFCAT_00489 1.2e-73 282.3 Bifidobacteriales Bacteria 2E9EF@1,2IKWQ@201174,333MW@2,4D10T@85004 NA|NA|NA KDBPDICH_00715 566552.BIFCAT_00488 0.0 1275.4 Bifidobacteriales typA GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 ko:K06207 ko00000 Bacteria 2GJUJ@201174,4CYX3@85004,COG1217@1,COG1217@2 NA|NA|NA T Elongation factor G C-terminus KDBPDICH_00716 566552.BIFCAT_00487 2.4e-234 817.8 Bifidobacteriales iscS1 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Bacteria 2GKUT@201174,4CZVW@85004,COG1104@1,COG1104@2 NA|NA|NA E Aminotransferase class-V KDBPDICH_00717 566552.BIFCAT_00486 2.2e-157 561.6 Bifidobacteriales nadC GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016020,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0030312,GO:0034213,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 1.4.3.16,2.4.2.19 ko:K00278,ko:K00767 ko00250,ko00760,ko01100,map00250,map00760,map01100 M00115 R00357,R00481,R03348 RC00006,RC02566,RC02877 ko00000,ko00001,ko00002,ko01000 Bacteria 2GV9P@201174,4CZWA@85004,COG0157@1,COG0157@2 NA|NA|NA H Quinolinate phosphoribosyl transferase, N-terminal domain KDBPDICH_00718 566552.BIFCAT_00485 0.0 1139.4 Bifidobacteriales nadB GO:0008150,GO:0040007 1.3.5.4,1.4.3.16,2.4.2.19 ko:K00244,ko:K00278,ko:K00767 ko00020,ko00190,ko00250,ko00620,ko00650,ko00720,ko00760,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00250,map00620,map00650,map00720,map00760,map01100,map01110,map01120,map01130,map01200,map02020 M00009,M00011,M00115,M00150,M00173 R00357,R00481,R02164,R03348 RC00006,RC00045,RC02566,RC02877 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1595 Bacteria 2I2IJ@201174,4D01P@85004,COG0029@1,COG0029@2 NA|NA|NA H Catalyzes the oxidation of L-aspartate to iminoaspartate KDBPDICH_00719 78346.BRUM_0259 7.3e-247 859.4 Bifidobacteriales nadA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 Bacteria 2GM59@201174,4D0AI@85004,COG0379@1,COG0379@2 NA|NA|NA H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate KDBPDICH_00720 566552.BIFCAT_00483 1.7e-153 548.5 Bifidobacteriales nrtR 3.6.1.55 ko:K03574 ko00000,ko01000,ko03400 Bacteria 2GNMT@201174,4CZNZ@85004,COG1051@1,COG1051@2 NA|NA|NA F NUDIX hydrolase KDBPDICH_00721 566552.BIFCAT_00482 2.6e-152 544.7 Bifidobacteriales soj GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0009295,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044424,GO:0044464,GO:0071944 ko:K03496 ko00000,ko03036,ko04812 Bacteria 2GJX3@201174,4CYV4@85004,COG1192@1,COG1192@2 NA|NA|NA D CobQ CobB MinD ParA nucleotide binding domain protein KDBPDICH_00722 566552.BIFCAT_00481 1.5e-172 612.1 Bifidobacteriales xerD GO:0008150,GO:0040007 ko:K03733,ko:K04763 ko00000,ko03036 Bacteria 2GNDP@201174,4CZ69@85004,COG4974@1,COG4974@2 NA|NA|NA D recombinase XerD KDBPDICH_00723 547043.BIFPSEUDO_02986 9.6e-62 242.7 Bifidobacteriales rplT GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 ko:K02887 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IHTN@201174,4D0QF@85004,COG0292@1,COG0292@2 NA|NA|NA J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit KDBPDICH_00724 547043.BIFPSEUDO_02987 2.1e-25 120.9 Bifidobacteriales rpmI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 ko:K02916 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2HZRM@201174,4D1EV@85004,COG0291@1,COG0291@2 NA|NA|NA J Ribosomal protein L35 KDBPDICH_00725 566552.BIFCAT_00478 2.2e-104 385.2 Bifidobacteriales infC GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 ko:K02520 ko00000,ko03012,ko03029 Bacteria 2GJGT@201174,4CZA3@85004,COG0290@1,COG0290@2 NA|NA|NA J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins KDBPDICH_00726 566552.BIFCAT_00477 4.4e-143 513.8 Bifidobacteriales 2.7.6.2 ko:K00949 ko00730,ko01100,map00730,map01100 R00619 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 2HQZZ@201174,4CZBY@85004,COG1564@1,COG1564@2 NA|NA|NA H Thiamin pyrophosphokinase, vitamin B1 binding domain KDBPDICH_00727 547043.BIFPSEUDO_02991 1.6e-199 701.8 Bifidobacteriales gap GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009986,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0019362,GO:0019637,GO:0019674,GO:0022610,GO:0034641,GO:0036094,GO:0043891,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044464,GO:0044650,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051704,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0097159,GO:0140030,GO:0140032,GO:1901265,GO:1901360,GO:1901363,GO:1901564 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 iJR904.b1416,iJR904.b1417 Bacteria 2GJK4@201174,4CZ97@85004,COG0057@1,COG0057@2 NA|NA|NA G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family KDBPDICH_00728 566552.BIFCAT_00475 5e-90 337.0 Bifidobacteriales ybaK GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0043906,GO:0043907,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 ko:K03976 ko00000,ko01000,ko03016 Bacteria 2IHS8@201174,4CZFI@85004,COG2606@1,COG2606@2 NA|NA|NA J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily KDBPDICH_00729 566552.BIFCAT_00474 5.7e-186 656.8 Bifidobacteriales ispH 1.17.7.4,2.7.4.25 ko:K00945,ko:K02945,ko:K03527 ko00240,ko00900,ko01100,ko01110,ko01130,ko03010,map00240,map00900,map01100,map01110,map01130,map03010 M00052,M00096,M00178 R00158,R00512,R01665,R05884,R08210 RC00002,RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03011 iIT341.HP0400,iLJ478.TM1444 Bacteria 2GIZ7@201174,4CZ8B@85004,COG0761@1,COG0761@2 NA|NA|NA IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis KDBPDICH_00730 566552.BIFCAT_00473 2.2e-187 661.4 Bifidobacteriales galM 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ0H@201174,4CYWN@85004,COG2017@1,COG2017@2 NA|NA|NA G Aldose 1-epimerase KDBPDICH_00731 547043.BIFPSEUDO_02995 7.3e-39 166.0 Bifidobacteriales Bacteria 29M53@1,2GTWX@201174,3082I@2,4D1EJ@85004 NA|NA|NA KDBPDICH_00732 566552.BIFCAT_00470 1.9e-95 355.1 Bifidobacteriales sigH ko:K03088 ko00000,ko03021 Bacteria 2GJ02@201174,4CZ09@85004,COG1595@1,COG1595@2 NA|NA|NA K Belongs to the sigma-70 factor family. ECF subfamily KDBPDICH_00733 566552.BIFCAT_00469 1.2e-283 981.9 Bifidobacteriales murE 6.3.2.13,6.3.2.7 ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 R02786,R02788 RC00064,RC00090 ko00000,ko00001,ko01000,ko01011 Bacteria 2GIS2@201174,4CZAF@85004,COG0769@1,COG0769@2 NA|NA|NA M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan KDBPDICH_00734 566552.BIFCAT_00468 9.2e-189 666.0 Bifidobacteriales ko:K12554 ko00550,ko01100,map00550,map01100 R08780 RC00055,RC00064 ko00000,ko00001,ko01000,ko01011 Bacteria 2GJUD@201174,4CZT9@85004,COG2348@1,COG2348@2 NA|NA|NA V Acetyltransferase (GNAT) domain KDBPDICH_00735 566552.BIFCAT_00466 1.5e-297 1028.1 Bifidobacteriales folC GO:0003674,GO:0003824,GO:0004326,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006761,GO:0006807,GO:0008150,GO:0008152,GO:0008841,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046452,GO:0046483,GO:0046900,GO:0046901,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv2447c Bacteria 2GJP2@201174,4CZG9@85004,COG0285@1,COG0285@2 NA|NA|NA H Mur ligase middle domain KDBPDICH_00736 547043.BIFPSEUDO_03002 0.0 1092.0 Bifidobacteriales pepP 3.4.11.9 ko:K01262 ko00000,ko01000,ko01002 Bacteria 2GM7D@201174,4CZIA@85004,COG0006@1,COG0006@2 NA|NA|NA E Aminopeptidase P, N-terminal domain KDBPDICH_00737 566552.BIFCAT_00464 1.9e-97 361.7 Bifidobacteriales 3.6.1.55 ko:K03574,ko:K06287 ko00000,ko01000,ko03400 Bacteria 2IKKB@201174,4CZS4@85004,COG1051@1,COG1051@2 NA|NA|NA F NUDIX domain KDBPDICH_00738 547043.BIFPSEUDO_03004 9.8e-83 312.8 Bifidobacteriales ko:K02031,ko:K02032 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2H3HY@201174,4CYU0@85004,COG1123@1,COG4172@2 NA|NA|NA P Belongs to the ABC transporter superfamily KDBPDICH_00739 566552.BIFCAT_00462 1e-226 792.3 Bifidobacteriales Bacteria 2GJ2S@201174,4CYV9@85004,COG1940@1,COG1940@2 NA|NA|NA GK ROK family KDBPDICH_00740 566552.BIFCAT_00461 3.9e-170 604.0 Bifidobacteriales 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 2HZB3@201174,4CZFC@85004,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase KDBPDICH_00741 398513.BBNG_00476 4.9e-29 134.0 Bifidobacteriales Bacteria 2B3SJ@1,2GX7W@201174,31WG6@2,4D1T0@85004 NA|NA|NA KDBPDICH_00742 547043.BIFPSEUDO_03011 8.4e-248 862.4 Bifidobacteriales yihS 5.1.3.11 ko:K16213 R01445,R10810 RC00289 ko00000,ko01000 Bacteria 2GMJ7@201174,4CZNY@85004,COG2942@1,COG2942@2 NA|NA|NA G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) KDBPDICH_00743 547043.BIFPSEUDO_03012 1.7e-140 505.8 Bifidobacteriales ftsQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 6.3.2.4 ko:K01921,ko:K03589,ko:K06438 ko00473,ko00550,ko01100,ko01502,ko04112,map00473,map00550,map01100,map01502,map04112 R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011,ko03036 Bacteria 2H4A4@201174,4D04A@85004,COG1589@1,COG1589@2 NA|NA|NA D Cell division protein FtsQ KDBPDICH_00744 547043.BIFPSEUDO_03013 2.3e-271 941.0 Bifidobacteriales murC GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 2I2E7@201174,4CZ3B@85004,COG0773@1,COG0773@2 NA|NA|NA M Belongs to the MurCDEF family KDBPDICH_00745 547043.BIFPSEUDO_03014 6.3e-216 756.5 Bifidobacteriales murG GO:0008150,GO:0040007 2.4.1.227,6.3.2.8 ko:K01924,ko:K02563 ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112 R03193,R05032,R05662 RC00005,RC00049,RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 GT28 iLJ478.TM0232 Bacteria 2GJEM@201174,4CYQS@85004,COG0707@1,COG0707@2 NA|NA|NA M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) KDBPDICH_00746 566552.BIFCAT_00455 8.1e-203 713.0 Bifidobacteriales ftsW GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008360,GO:0009987,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032153,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051301,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071705,GO:0071944,GO:1901264,GO:1901505 2.4.1.227 ko:K02563,ko:K03588 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011,ko02000,ko03036 2.A.103.1 GT28 Bacteria 2GKXP@201174,4CYPZ@85004,COG0772@1,COG0772@2 NA|NA|NA D Belongs to the SEDS family KDBPDICH_00747 566552.BIFCAT_00454 2.1e-255 887.9 Bifidobacteriales murD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iNJ661.Rv2155c Bacteria 2GJZA@201174,4CZKI@85004,COG0771@1,COG0771@2 NA|NA|NA M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) KDBPDICH_00748 547043.BIFPSEUDO_03017 8.8e-193 679.5 Bifidobacteriales mraY GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 iAF987.Gmet_0409,iEC042_1314.EC042_0088,iECABU_c1320.ECABU_c00920,iECED1_1282.ECED1_0088,iECH74115_1262.ECH74115_0095,iECSP_1301.ECSP_0090,iECs_1301.ECs0091,iG2583_1286.G2583_0091,iSDY_1059.SDY_0117,iZ_1308.Z0097,ic_1306.c0105 Bacteria 2GNEH@201174,4CYRX@85004,COG0472@1,COG0472@2 NA|NA|NA M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan KDBPDICH_00749 547043.BIFPSEUDO_03018 6.4e-263 912.9 Bifidobacteriales murF 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 2GK0Y@201174,4CZ7U@85004,COG0770@1,COG0770@2 NA|NA|NA M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein KDBPDICH_00750 547043.BIFPSEUDO_03019 9.3e-153 546.2 Bifidobacteriales yqeC 6.3.2.10,6.3.2.13 ko:K01928,ko:K15792 ko00300,ko00550,map00300,map00550 R02788,R04617 RC00064,RC00090,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 2GMZF@201174,4CYWT@85004,COG0769@1,COG0769@2 NA|NA|NA M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan KDBPDICH_00751 566552.BIFCAT_00450 0.0 1140.2 Bifidobacteriales ftsI GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 ko:K03587,ko:K08384,ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 iSSON_1240.SSON_0092 Bacteria 2GKHH@201174,4CYS8@85004,COG0768@1,COG0768@2 NA|NA|NA M Penicillin-binding protein, transpeptidase domain protein KDBPDICH_00752 1680.BADO_1158 1.7e-60 238.8 Bifidobacteriales ftsL ko:K05589,ko:K12065 ko00000,ko02044,ko03036 3.A.7.11.1 Bacteria 2IKUA@201174,4D109@85004,COG2919@1,COG2919@2 NA|NA|NA D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic KDBPDICH_00753 547043.BIFPSEUDO_03022 2.5e-189 667.9 Bifidobacteriales rsmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 ko:K03438 ko00000,ko01000,ko03009 Bacteria 2GJGK@201174,4CYRM@85004,COG0275@1,COG0275@2 NA|NA|NA J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA KDBPDICH_00754 547043.BIFPSEUDO_03023 1.6e-91 342.0 Bifidobacteriales mraZ GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0040007,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 ko:K03925 ko00000 Bacteria 2IHUB@201174,4D0P1@85004,COG2001@1,COG2001@2 NA|NA|NA K Belongs to the MraZ family KDBPDICH_00755 547043.BIFPSEUDO_03024 0.0 1470.3 Bifidobacteriales Bacteria 2GK30@201174,4CYUF@85004,COG3973@1,COG3973@2 NA|NA|NA L DNA helicase KDBPDICH_00756 1680.BADO_1162 8.7e-218 762.7 Bifidobacteriales serA GO:0003674,GO:0003824,GO:0004617,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008219,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0012501,GO:0016053,GO:0016491,GO:0016597,GO:0016614,GO:0016616,GO:0019752,GO:0031406,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047545,GO:0055114,GO:0070905,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 iYL1228.KPN_03348 Bacteria 2GJGA@201174,4CYPT@85004,COG0111@1,COG0111@2 NA|NA|NA EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KDBPDICH_00757 547043.BIFPSEUDO_03027 2.9e-84 317.8 Bifidobacteriales nrdR GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K07738 ko00000,ko03000 Bacteria 2IHU9@201174,4D0P7@85004,COG1327@1,COG1327@2 NA|NA|NA K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes KDBPDICH_00758 547043.BIFPSEUDO_03028 1e-53 215.7 Bifidobacteriales Bacteria 2HVH4@201174,4D1G8@85004,COG1388@1,COG1388@2 NA|NA|NA M Lysin motif KDBPDICH_00759 547043.BIFPSEUDO_03029 2.2e-131 474.9 Bifidobacteriales lexA 3.4.21.88 ko:K01356 M00729 ko00000,ko00002,ko01000,ko01002,ko03400 Bacteria 2GMBN@201174,4CZ26@85004,COG1974@1,COG1974@2 NA|NA|NA K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair KDBPDICH_00760 547043.BIFPSEUDO_03030 1.3e-149 535.8 Bifidobacteriales czcD ko:K16264 ko00000,ko02000 2.A.4.1 Bacteria 2GMRZ@201174,4CZAB@85004,COG1230@1,COG1230@2 NA|NA|NA P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family KDBPDICH_00761 547043.BIFPSEUDO_03031 2.3e-176 624.8 Bifidobacteriales ldh 1.1.1.27,1.1.1.37 ko:K00016,ko:K00024 ko00010,ko00020,ko00270,ko00620,ko00630,ko00640,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04922,map00010,map00020,map00270,map00620,map00630,map00640,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200,map04922 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R00703,R01000,R03104,R07136 RC00031,RC00044 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GN5S@201174,4CYWK@85004,COG0039@1,COG0039@2 NA|NA|NA C Belongs to the LDH MDH superfamily. LDH family KDBPDICH_00762 547043.BIFPSEUDO_03032 4.9e-271 939.9 Bifidobacteriales hflX GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 ko:K03665 ko00000,ko03009 Bacteria 2GK55@201174,4CZCB@85004,COG2262@1,COG2262@2 NA|NA|NA S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis KDBPDICH_00763 547043.BIFPSEUDO_03033 2.9e-113 414.5 Bifidobacteriales rsmC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 2.1.1.172 ko:K00564 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 2IFG7@201174,4CZP1@85004,COG2813@1,COG2813@2 NA|NA|NA J Ribosomal protein L11 methyltransferase (PrmA) KDBPDICH_00764 547043.BIFPSEUDO_03034 0.0 2682.5 Bifidobacteriales hrpA GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 ko:K03578 ko00000,ko01000 Bacteria 2GIWX@201174,4CZ3C@85004,COG1643@1,COG1643@2 NA|NA|NA L Helicase associated domain (HA2) Add an annotation KDBPDICH_00765 547043.BIFPSEUDO_03035 2.1e-191 674.9 Bifidobacteriales Bacteria 2C746@1,2I2G8@201174,340R4@2,4CZHI@85004 NA|NA|NA KDBPDICH_00766 547043.BIFPSEUDO_03036 9.5e-184 649.4 Bifidobacteriales Bacteria 2I9EN@201174,4D025@85004,COG3023@1,COG3023@2 NA|NA|NA V N-Acetylmuramoyl-L-alanine amidase KDBPDICH_00767 547043.BIFPSEUDO_03037 7.6e-83 313.5 Bifidobacteriales Bacteria 2F769@1,2IFMJ@201174,33ZMP@2,4D0UD@85004 NA|NA|NA KDBPDICH_00768 1680.BADO_1176 5.4e-57 227.6 Bifidobacteriales Bacteria 2GPC6@201174,4D16R@85004,COG2197@1,COG2197@2 NA|NA|NA T helix_turn_helix, Lux Regulon KDBPDICH_00769 1680.BADO_0036 8.7e-29 134.8 Bifidobacteriales 2.7.13.3 ko:K07675,ko:K20263 ko02020,ko02024,map02020,map02024 M00473,M00818 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 2II1W@201174,4D0V3@85004,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase KDBPDICH_00770 547043.BIFPSEUDO_03038 1.1e-118 432.6 Bifidobacteriales ytrE ko:K02003,ko:K09810,ko:K10038 ko02010,map02010 M00227,M00255,M00258 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.125,3.A.1.3.2 Bacteria 2ICH8@201174,4CZF8@85004,COG1136@1,COG1136@2 NA|NA|NA V ATPases associated with a variety of cellular activities KDBPDICH_00771 547043.BIFPSEUDO_03039 9.5e-220 769.2 Bifidobacteriales Bacteria 2GK8C@201174,4CZH1@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_00772 547043.BIFPSEUDO_03040 2.4e-138 498.4 Bifidobacteriales Bacteria 2HYIN@201174,4CYU1@85004,COG5479@1,COG5479@2 NA|NA|NA M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses KDBPDICH_00773 547043.BIFPSEUDO_03041 5.6e-219 766.9 Bifidobacteriales Bacteria 2AZXA@1,2GQBM@201174,31S72@2,4D1E0@85004 NA|NA|NA S Domain of unknown function (DUF5067) KDBPDICH_00774 547043.BIFPSEUDO_03042 3.1e-264 917.1 Bifidobacteriales glnA2 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050001,GO:0071944 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 Bacteria 2GJ2I@201174,4CZ0G@85004,COG0174@1,COG0174@2 NA|NA|NA E glutamine synthetase KDBPDICH_00775 547043.BIFPSEUDO_03043 1.4e-130 472.2 Bifidobacteriales hisA GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16,5.3.1.24 ko:K01814,ko:K01817 ko00340,ko00400,ko01100,ko01110,ko01130,ko01230,map00340,map00400,map01100,map01110,map01130,map01230 M00023,M00026 R03509,R04640 RC00945 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ4V@201174,4CZEA@85004,COG0106@1,COG0106@2 NA|NA|NA E Histidine biosynthesis protein KDBPDICH_00776 547043.BIFPSEUDO_03044 6.3e-122 443.4 Bifidobacteriales hisH GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 Bacteria 2GIYS@201174,4CZGA@85004,COG0118@1,COG0118@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR KDBPDICH_00777 547043.BIFPSEUDO_03045 1.5e-122 445.7 Bifidobacteriales Bacteria 2EKCN@1,2GNIC@201174,33E2Y@2,4D0B5@85004 NA|NA|NA KDBPDICH_00778 547043.BIFPSEUDO_03046 1.5e-109 402.1 Bifidobacteriales hisB GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0004424,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042578,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,2.6.1.9,3.1.3.15,4.2.1.19 ko:K00013,ko:K00817,ko:K01089,ko:K01693 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R01158,R01163,R03012,R03013,R03243,R03457 RC00006,RC00017,RC00099,RC00242,RC00463,RC00888,RC00932 ko00000,ko00001,ko00002,ko01000,ko01007 iECO111_1330.ECO111_2746,iECS88_1305.ECS88_2121,iJN746.PP_0289,iLJ478.TM1039,iSB619.SA_RS14130,iUMNK88_1353.UMNK88_2570 Bacteria 2GKMD@201174,4CZDD@85004,COG0131@1,COG0131@2 NA|NA|NA E Imidazoleglycerol-phosphate dehydratase KDBPDICH_00779 547043.BIFPSEUDO_03047 2.5e-225 787.7 Bifidobacteriales hisC GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 2GJ9W@201174,4CZDT@85004,COG0079@1,COG0079@2 NA|NA|NA E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily KDBPDICH_00780 547043.BIFPSEUDO_03048 2.4e-259 901.0 Bifidobacteriales hisD GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,1.1.1.308 ko:K00013,ko:K15509 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01158,R01163,R03012 RC00099,RC00242,RC00463 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1599 Bacteria 2GKKA@201174,4CZ3E@85004,COG0141@1,COG0141@2 NA|NA|NA E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine KDBPDICH_00781 547043.BIFPSEUDO_03049 0.0 2412.1 Bifidobacteriales dnaE 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 2GJ1P@201174,4CZKT@85004,COG0587@1,COG0587@2 NA|NA|NA L DNA polymerase III alpha subunit KDBPDICH_00782 547043.BIFPSEUDO_03050 1.9e-175 621.7 Bifidobacteriales rluD GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 ko00000,ko01000,ko03009,ko03016 iE2348C_1286.E2348C_2868,iECED1_1282.ECED1_3035,iECSF_1327.ECSF_2432 Bacteria 2GIY1@201174,4CYYR@85004,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil KDBPDICH_00783 547043.BIFPSEUDO_03051 3.6e-86 324.3 Bifidobacteriales lspA 3.4.23.36 ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 2GKRX@201174,4D0WR@85004,COG0597@1,COG0597@2 NA|NA|NA MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins KDBPDICH_00784 547043.BIFPSEUDO_03052 4.5e-31 142.9 Bifidobacteriales 3.1.21.3 ko:K01153,ko:K02557,ko:K10352,ko:K18682 ko02030,ko02040,ko03018,ko04530,map02030,map02040,map03018,map04530 ko00000,ko00001,ko01000,ko02000,ko02035,ko02048,ko03019,ko04147,ko04812 1.A.30.1 Bacteria 2I2G9@201174,4CZ5W@85004,COG1566@1,COG1566@2 NA|NA|NA V DivIVA protein KDBPDICH_00785 547043.BIFPSEUDO_03053 1.2e-40 172.2 Bifidobacteriales yggT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02221 ko00000,ko02044 Bacteria 2GQI1@201174,4D17B@85004,COG0762@1,COG0762@2 NA|NA|NA S YGGT family KDBPDICH_00786 547043.BIFPSEUDO_03054 8.9e-81 306.2 Bifidobacteriales sepF GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0032506,GO:0042802,GO:0044085,GO:0051301,GO:0071840,GO:0090529 ko:K09772 ko00000,ko03036 Bacteria 2GNVH@201174,4D0RJ@85004,COG1799@1,COG1799@2 NA|NA|NA D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA KDBPDICH_00787 547043.BIFPSEUDO_03055 5.6e-220 770.0 Bifidobacteriales ftsZ GO:0000166,GO:0000287,GO:0000910,GO:0000921,GO:0000935,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022402,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032155,GO:0032185,GO:0032506,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0045787,GO:0046872,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051258,GO:0051301,GO:0051726,GO:0065003,GO:0065007,GO:0070925,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Bacteria 2GJWC@201174,4CZ10@85004,COG0206@1,COG0206@2 NA|NA|NA D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity KDBPDICH_00788 547043.BIFPSEUDO_03056 5.5e-244 849.7 Bifidobacteriales dus GO:0008150,GO:0010565,GO:0019216,GO:0019217,GO:0019222,GO:0031323,GO:0050789,GO:0050794,GO:0062012,GO:0065007,GO:0080090 Bacteria 2GJ8I@201174,4CZFD@85004,COG0042@1,COG0042@2 NA|NA|NA J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines KDBPDICH_00789 547043.BIFPSEUDO_03057 1.3e-295 1021.5 Bifidobacteriales glyQS GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 ko:K01880 ko00970,map00970 M00359,M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iSB619.SA_RS07880 Bacteria 2GIT3@201174,4CYZU@85004,COG0423@1,COG0423@2 NA|NA|NA J Catalyzes the attachment of glycine to tRNA(Gly) KDBPDICH_00790 547043.BIFPSEUDO_03058 1e-105 389.4 Bifidobacteriales ko:K02664 ko00000,ko02035,ko02044 Bacteria 2C85K@1,2HZWT@201174,3482I@2,4D004@85004 NA|NA|NA S Pilus assembly protein, PilO KDBPDICH_00791 547043.BIFPSEUDO_03059 8.1e-166 589.7 Bifidobacteriales pilN ko:K02663 ko00000,ko02035,ko02044 Bacteria 2IBVZ@201174,4D002@85004,COG3166@1,COG3166@2 NA|NA|NA NU PFAM Fimbrial assembly family protein KDBPDICH_00792 547043.BIFPSEUDO_03060 7.9e-191 672.9 Bifidobacteriales pilM ko:K02662 ko00000,ko02035,ko02044 Bacteria 2IBNF@201174,4D02I@85004,COG4972@1,COG4972@2 NA|NA|NA NU Type IV pilus assembly protein PilM; KDBPDICH_00793 547043.BIFPSEUDO_03061 2.4e-150 538.1 Bifidobacteriales pilD 3.4.23.43 ko:K02278,ko:K02654 M00331 ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 3.A.15.2 Bacteria 2GJ7K@201174,4D0GI@85004,COG1989@1,COG1989@2 NA|NA|NA NOU Bacterial Peptidase A24 N-terminal domain KDBPDICH_00794 547043.BIFPSEUDO_03062 2.2e-73 281.6 Bifidobacteriales Bacteria 2AMW2@1,2I96K@201174,31CSW@2,4D06S@85004 NA|NA|NA KDBPDICH_00795 547043.BIFPSEUDO_03062 0.0 1092.4 Bifidobacteriales Bacteria 2AMW2@1,2I96K@201174,31CSW@2,4D06S@85004 NA|NA|NA KDBPDICH_00796 547043.BIFPSEUDO_03063 2.3e-229 801.2 Bifidobacteriales pilC ko:K02653 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 2GQW0@201174,4D03V@85004,COG1459@1,COG1459@2 NA|NA|NA U Type II secretion system (T2SS), protein F KDBPDICH_00797 547043.BIFPSEUDO_03064 3.1e-72 277.7 Bifidobacteriales pilA ko:K02650 ko02020,map02020 ko00000,ko00001,ko02035,ko02044 3.A.15.2 Bacteria 2GTN8@201174,4D13E@85004,COG2165@1,COG2165@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif KDBPDICH_00798 547043.BIFPSEUDO_03066 2.5e-105 388.3 Bifidobacteriales Bacteria 2ARXR@1,2IGG9@201174,31H9N@2,4D0QT@85004 NA|NA|NA S Prokaryotic N-terminal methylation motif KDBPDICH_00799 547043.BIFPSEUDO_03067 2.4e-136 491.5 Bifidobacteriales ppdC ko:K02458,ko:K02671,ko:K02681 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02035,ko02044 3.A.15 Bacteria 2IA38@201174,4D0NY@85004,COG4967@1,COG4967@2 NA|NA|NA NU Prokaryotic N-terminal methylation motif KDBPDICH_00800 547043.BIFPSEUDO_03068 0.0 1137.5 Bifidobacteriales pulE ko:K02652 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 2I8C2@201174,4CZG8@85004,COG2804@1,COG2804@2 NA|NA|NA NU Type II/IV secretion system protein KDBPDICH_00801 547043.BIFPSEUDO_03069 0.0 1177.2 Bifidobacteriales pilT ko:K02669 ko00000,ko02035,ko02044 3.A.15.2 Bacteria 2I9GT@201174,4D04P@85004,COG2805@1,COG2805@2 NA|NA|NA NU Type II/IV secretion system protein KDBPDICH_00802 547043.BIFPSEUDO_03070 0.0 1252.7 Bifidobacteriales Bacteria 28N8A@1,2ICHB@201174,2ZQTH@2,4CZQ0@85004 NA|NA|NA KDBPDICH_00803 547043.BIFPSEUDO_03071 9.9e-155 552.7 Bifidobacteriales thiM 2.7.1.50 ko:K00878 ko00730,ko01100,map00730,map01100 M00127 R04448 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 2IC73@201174,4CZU8@85004,COG2145@1,COG2145@2 NA|NA|NA H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) KDBPDICH_00804 547043.BIFPSEUDO_03072 1.1e-133 482.6 Bifidobacteriales thiE GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3,2.7.1.49,2.7.4.7,4.1.99.17 ko:K00788,ko:K03147,ko:K14153 ko00730,ko01100,map00730,map01100 M00127 R03223,R03471,R03472,R04509,R10712 RC00002,RC00017,RC00224,RC03251,RC03252,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 iYO844.BSU38290 Bacteria 2I2GC@201174,4D2V2@85004,COG0352@1,COG0352@2 NA|NA|NA H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) KDBPDICH_00805 547043.BIFPSEUDO_03073 2.9e-151 541.2 Bifidobacteriales thiD 2.5.1.3,2.7.1.49,2.7.4.7,4.1.99.17 ko:K00941,ko:K03147,ko:K14153 ko00730,ko01100,map00730,map01100 M00127 R03223,R03471,R03472,R04509,R10712 RC00002,RC00017,RC00224,RC03251,RC03252,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2909 Bacteria 2GKZM@201174,4CYQA@85004,COG0351@1,COG0351@2 NA|NA|NA H Phosphomethylpyrimidine kinase KDBPDICH_00806 547043.BIFPSEUDO_03074 3e-60 237.7 Bifidobacteriales GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 Bacteria 2IQ7E@201174,4D14E@85004,COG0011@1,COG0011@2 NA|NA|NA S Thiamine-binding protein KDBPDICH_00807 566552.BIFCAT_00412 1.6e-191 675.2 Bifidobacteriales ko:K02529 ko00000,ko03000 Bacteria 2GJY9@201174,4CYU5@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_00808 401473.BDP_1602 1.4e-240 838.6 Bifidobacteriales lacY ko:K02532,ko:K05820,ko:K08167,ko:K08218,ko:K08369 ko01501,map01501 M00628,M00713,M00714 ko00000,ko00001,ko00002,ko01504,ko02000 2.A.1,2.A.1.25,2.A.1.27,2.A.1.3,2.A.1.5 Bacteria 2GJRD@201174,4CYTK@85004,COG2807@1,COG2807@2 NA|NA|NA P LacY proton/sugar symporter KDBPDICH_00809 547043.BIFPSEUDO_03078 0.0 1092.4 Bifidobacteriales cscA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.26 ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 R00801,R00802,R02410,R03635,R03921,R06088 RC00028,RC00077 ko00000,ko00001,ko01000 GH32 iE2348C_1286.E2348C_2556,iEC55989_1330.EC55989_2656,iECIAI1_1343.ECIAI1_2428 Bacteria 2GJ9T@201174,4CZ8W@85004,COG1621@1,COG1621@2 NA|NA|NA G Belongs to the glycosyl hydrolase 32 family KDBPDICH_00810 547043.BIFPSEUDO_03079 1.4e-142 512.3 Bifidobacteriales ytlD1 2.7.1.50 ko:K00878,ko:K15599 ko00730,ko01100,ko02010,map00730,map01100,map02010 M00127,M00442 R04448 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.17.3,3.A.1.17.6 Bacteria 2GKKZ@201174,4CZ9Q@85004,COG0600@1,COG0600@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_00811 547043.BIFPSEUDO_03080 9.1e-206 722.6 Bifidobacteriales ko:K02051 M00188 ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 Bacteria 2HZ9T@201174,4CZ56@85004,COG0715@1,COG0715@2 NA|NA|NA P NMT1/THI5 like KDBPDICH_00812 547043.BIFPSEUDO_03081 1.7e-216 758.4 Bifidobacteriales iunH1 3.2.2.1 ko:K01239 ko00230,ko00760,ko01100,map00230,map00760,map01100 R01245,R01273,R01677,R01770,R02143 RC00033,RC00063,RC00122,RC00318,RC00485 ko00000,ko00001,ko01000 Bacteria 2I9SG@201174,4CZWE@85004,COG1957@1,COG1957@2 NA|NA|NA F nucleoside hydrolase KDBPDICH_00813 547043.BIFPSEUDO_03082 4e-155 553.9 Bifidobacteriales uppS GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008834,GO:0009058,GO:0009987,GO:0016020,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0030145,GO:0033850,GO:0040007,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0046872,GO:0046914,GO:0050347,GO:0071704,GO:0071944,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.86,2.5.1.88 ko:K00806,ko:K14215,ko:K21273 ko00900,ko01110,map00900,map01110 R06447,R09244,R09731 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 Bacteria 2GIXF@201174,4CZAR@85004,COG0020@1,COG0020@2 NA|NA|NA H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids KDBPDICH_00814 547043.BIFPSEUDO_03083 7.3e-135 486.5 Bifidobacteriales recO GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 2GK81@201174,4CZCN@85004,COG1381@1,COG1381@2 NA|NA|NA L Involved in DNA repair and RecF pathway recombination KDBPDICH_00815 547043.BIFPSEUDO_03084 0.0 1104.4 Bifidobacteriales Bacteria 2I2GD@201174,4CZUD@85004,COG0657@1,COG0657@2 NA|NA|NA I acetylesterase activity KDBPDICH_00816 547043.BIFPSEUDO_03085 3.3e-225 787.3 Bifidobacteriales ispG GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009055,GO:0009058,GO:0009240,GO:0009987,GO:0016020,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0022900,GO:0030312,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044464,GO:0046429,GO:0046490,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0052592,GO:0055114,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R08689,R10859 RC01486 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS06430,iJN678.gcpE Bacteria 2GK2S@201174,4CYQB@85004,COG0821@1,COG0821@2 NA|NA|NA I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate KDBPDICH_00817 547043.BIFPSEUDO_03086 8.5e-218 762.7 Bifidobacteriales dxr GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1814,iECOK1_1307.ECOK1_0174,iECS88_1305.ECS88_0183,iHN637.CLJU_RS06420,iUMN146_1321.UM146_23670,iUTI89_1310.UTI89_C0188 Bacteria 2GIRV@201174,4CZVC@85004,COG0743@1,COG0743@2 NA|NA|NA I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) KDBPDICH_00818 547043.BIFPSEUDO_03087 3.4e-238 830.9 Bifidobacteriales 2.7.11.1 ko:K08884,ko:K12132 ko00000,ko01000,ko01001 Bacteria 2I2GE@201174,4CZDF@85004,COG3170@1,COG3170@2 NA|NA|NA NU Tfp pilus assembly protein FimV KDBPDICH_00820 547043.BIFPSEUDO_03090 6.5e-75 286.6 Bifidobacteriales Bacteria 2B57P@1,2IFRB@201174,31Y1M@2,4D307@85004 NA|NA|NA S Protein of unknown function (DUF3052) KDBPDICH_00821 566552.BIFCAT_00397 3.8e-154 550.8 Bifidobacteriales lon ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Bacteria 2GMFX@201174,4CYUP@85004,COG3480@1,COG3480@2 NA|NA|NA T Belongs to the peptidase S16 family KDBPDICH_00822 547043.BIFPSEUDO_03092 1.7e-285 988.0 Bifidobacteriales Bacteria 2GJ9K@201174,4CYU7@85004,COG5282@1,COG5282@2 NA|NA|NA S Zincin-like metallopeptidase KDBPDICH_00823 547043.BIFPSEUDO_03093 1.8e-281 974.5 Bifidobacteriales uvrD2 GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0006996,GO:0008094,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0040007,GO:0042623,GO:0043167,GO:0043169,GO:0046872,GO:0051276,GO:0071103,GO:0071840,GO:0140097 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 2GKRW@201174,4CZ3A@85004,COG0210@1,COG0210@2 NA|NA|NA L DNA helicase KDBPDICH_00824 547043.BIFPSEUDO_03094 1.1e-270 938.7 Bifidobacteriales mphA Bacteria 2I8R6@201174,4CYPR@85004,COG3173@1,COG3173@2 NA|NA|NA S Aminoglycoside phosphotransferase KDBPDICH_00825 547043.BIFPSEUDO_03095 3.6e-32 143.7 Bifidobacteriales Bacteria 2AS45@1,2HZSD@201174,31HGW@2,4D1H9@85004 NA|NA|NA S Protein of unknown function (DUF3107) KDBPDICH_00826 547043.BIFPSEUDO_03096 5e-173 613.6 Bifidobacteriales PPA1328 3.1.3.97 ko:K07053 R00188,R11188 RC00078 ko00000,ko01000 Bacteria 2GNAP@201174,4CYQ5@85004,COG0613@1,COG0613@2 NA|NA|NA S DNA polymerase alpha chain like domain KDBPDICH_00827 547043.BIFPSEUDO_03097 2.1e-117 428.3 Bifidobacteriales Bacteria 2GMVK@201174,4CZN1@85004,COG4243@1,COG4243@2 NA|NA|NA S Vitamin K epoxide reductase KDBPDICH_00828 547043.BIFPSEUDO_03098 1.7e-170 605.1 Bifidobacteriales dapF GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 iIT341.HP0566,iLJ478.TM1522 Bacteria 2GKUD@201174,4CYQP@85004,COG0253@1,COG0253@2 NA|NA|NA E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine KDBPDICH_00829 547043.BIFPSEUDO_03099 2.2e-145 521.5 Bifidobacteriales murI GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.3 ko:K01776 ko00471,ko01100,map00471,map01100 R00260 RC00302 ko00000,ko00001,ko01000,ko01011 Bacteria 2GN4I@201174,4CZ54@85004,COG0796@1,COG0796@2 NA|NA|NA M Provides the (R)-glutamate required for cell wall biosynthesis KDBPDICH_00830 547043.BIFPSEUDO_03102 3.5e-21 106.7 Bifidobacteriales ko:K07001 ko00000 Bacteria 2I8R7@201174,4CZUH@85004,COG4667@1,COG4667@2 NA|NA|NA S Patatin-like phospholipase KDBPDICH_00831 547043.BIFPSEUDO_03101 5e-301 1039.6 Bifidobacteriales ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 2GIUH@201174,4CZFK@85004,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substrate-binding protein, family 5 KDBPDICH_00832 547043.BIFPSEUDO_03103 4.9e-176 623.6 Bifidobacteriales iaaA 3.4.19.5,3.5.1.1 ko:K01424,ko:K13051 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 R00485 RC00010,RC02798 ko00000,ko00001,ko01000,ko01002 Bacteria 2IDMF@201174,4D073@85004,COG1446@1,COG1446@2 NA|NA|NA E Asparaginase KDBPDICH_00833 547043.BIFPSEUDO_03102 1.5e-160 572.0 Bifidobacteriales ko:K07001 ko00000 Bacteria 2I8R7@201174,4CZUH@85004,COG4667@1,COG4667@2 NA|NA|NA S Patatin-like phospholipase KDBPDICH_00834 547043.BIFPSEUDO_03104 5.1e-187 660.2 Bifidobacteriales Bacteria 2GKT0@201174,4D04F@85004,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain protein KDBPDICH_00835 547043.BIFPSEUDO_03105 4.8e-240 836.6 Bifidobacteriales patB 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 Bacteria 2GJFQ@201174,4CZFH@85004,COG1168@1,COG1168@2 NA|NA|NA E Aminotransferase, class I II KDBPDICH_00836 547043.BIFPSEUDO_03107 2.5e-121 441.4 Bifidobacteriales ko:K06999 ko00000 Bacteria 2GNIF@201174,4D0TH@85004,COG0400@1,COG0400@2 NA|NA|NA S Phospholipase/Carboxylesterase KDBPDICH_00837 77635.BISU_1071 3.8e-34 150.6 Bifidobacteriales cas2 GO:0000287,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 ko:K09951 ko00000,ko02048 Bacteria 2ISFY@201174,4D16B@85004,COG1343@1,COG1343@2 NA|NA|NA L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette KDBPDICH_00838 762211.BSTEL_1364 2.9e-153 548.1 Bifidobacteriales cas1 ko:K15342 ko00000,ko02048,ko03400 Bacteria 2I8M0@201174,4CZYS@85004,COG1518@1,COG1518@2 NA|NA|NA L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette KDBPDICH_00839 326426.Bbr_1407 3.6e-96 357.8 Bifidobacteriales cas4 3.1.12.1 ko:K07464,ko:K15342 ko00000,ko01000,ko02048,ko03400 Bacteria 2IAV6@201174,4D0B8@85004,COG1468@1,COG1468@2 NA|NA|NA L Domain of unknown function DUF83 KDBPDICH_00840 762211.BSTEL_1362 2.2e-144 518.5 Bifidobacteriales cas7c ko:K19118 ko00000,ko02048 Bacteria 2H4JU@201174,4CZQ5@85004,COG3649@1,COG3649@2 NA|NA|NA L CRISPR-associated protein Cas7 KDBPDICH_00841 762211.BSTEL_1361 2e-218 765.4 Bifidobacteriales csd1 ko:K19117 ko00000,ko02048 Bacteria 28HN3@1,2HVM1@201174,2Z7WH@2,4D2CS@85004 NA|NA|NA S CRISPR-associated protein (Cas_Csd1) KDBPDICH_00842 762211.BSTEL_1360 1.8e-100 372.1 Bifidobacteriales cas5d ko:K19119 ko00000,ko02048 Bacteria 2DBAF@1,2IDEP@201174,2Z82V@2,4CYQ7@85004 NA|NA|NA S CRISPR-associated protein (Cas_Cas5) KDBPDICH_00843 762211.BSTEL_1359 1.9e-301 1041.6 Bifidobacteriales ko:K07012 ko00000,ko01000,ko02048 Bacteria 2IC92@201174,4D0E8@85004,COG1203@1,COG1203@2,COG1418@1,COG1418@2 NA|NA|NA L DEAD-like helicases superfamily KDBPDICH_00844 78346.BRUM_1536 4.1e-128 464.2 Bifidobacteriales Bacteria 2GN3K@201174,4D03F@85004,COG3177@1,COG3177@2 NA|NA|NA S Fic/DOC family KDBPDICH_00845 78346.BRUM_1536 1.1e-18 98.6 Bifidobacteriales Bacteria 2GN3K@201174,4D03F@85004,COG3177@1,COG3177@2 NA|NA|NA S Fic/DOC family KDBPDICH_00846 518635.BIFANG_03359 4.7e-88 330.9 Bifidobacteriales ko:K06999 ko00000 Bacteria 2GNIF@201174,4D0TH@85004,COG0400@1,COG0400@2 NA|NA|NA S Phospholipase/Carboxylesterase KDBPDICH_00848 566552.BIFCAT_00368 0.0 2229.5 Bifidobacteriales ileS GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GK9M@201174,4CYT7@85004,COG0060@1,COG0060@2 NA|NA|NA J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) KDBPDICH_00849 547043.BIFPSEUDO_03121 8.7e-257 892.5 Bifidobacteriales lacS ko:K03292,ko:K11104,ko:K16209 ko00000,ko02000 2.A.2,2.A.2.1,2.A.2.2 Bacteria 2HD4Y@201174,4CZRA@85004,COG2211@1,COG2211@2 NA|NA|NA G Psort location CytoplasmicMembrane, score 10.00 KDBPDICH_00850 547043.BIFPSEUDO_03122 2.4e-184 651.4 Bifidobacteriales lacR ko:K02529 ko00000,ko03000 Bacteria 2H5ZG@201174,4CZ8A@85004,COG1609@1,COG1609@2 NA|NA|NA K Transcriptional regulator, LacI family KDBPDICH_00851 566552.BIFCAT_00365 0.0 1290.0 Bifidobacteriales ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 2GITR@201174,4CZPJ@85004,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region KDBPDICH_00852 547043.BIFPSEUDO_03126 0.0 1108.2 Bifidobacteriales ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 2GITR@201174,4CZMX@85004,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter, ATP-binding protein KDBPDICH_00853 547043.BIFPSEUDO_03127 9.2e-98 363.2 Bifidobacteriales Bacteria 2IIWT@201174,4D0WT@85004,COG1846@1,COG1846@2 NA|NA|NA K MarR family KDBPDICH_00854 566552.BIFCAT_00362 0.0 1465.3 Bifidobacteriales bglB 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 GH3 Bacteria 2GJ5H@201174,4CZ2P@85004,COG1472@1,COG1472@2 NA|NA|NA G Glycosyl hydrolase family 3 N-terminal domain protein KDBPDICH_00855 1680.BADO_1341 1.8e-104 385.2 Bifidobacteriales Bacteria 2I8DN@201174,4CZXN@85004,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family KDBPDICH_00856 566552.BIFCAT_00360 4.7e-200 703.7 Bifidobacteriales glxK GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.7.1.165 ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 R08572 RC00002,RC00428 ko00000,ko00001,ko01000 Bacteria 2GKHX@201174,4CZRH@85004,COG1929@1,COG1929@2 NA|NA|NA G Belongs to the glycerate kinase type-1 family KDBPDICH_00857 401473.BDP_0162 1.9e-181 642.1 Bifidobacteriales Bacteria 2GJZG@201174,4CZ93@85004,COG2211@1,COG2211@2 NA|NA|NA G Transporter major facilitator family protein KDBPDICH_00858 762211.BSTEL_1485 0.0 1543.5 Bifidobacteriales 3.2.1.40 ko:K05989 ko00000,ko01000 Bacteria 2GMR5@201174,4CZUE@85004,COG0174@1,COG0174@2 NA|NA|NA E Bacterial alpha-L-rhamnosidase C-terminal domain KDBPDICH_00859 762211.BSTEL_1484 4.4e-215 753.8 Bifidobacteriales ko:K06610 ko00000,ko02000 2.A.1.1.27 Bacteria 2I41G@201174,4D0JW@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_00860 762211.BSTEL_1483 1.2e-117 429.9 Bifidobacteriales ko:K02529 ko00000,ko03000 Bacteria 2GNVD@201174,4D0HB@85004,COG1609@1,COG1609@2 NA|NA|NA K Periplasmic binding protein domain KDBPDICH_00861 1435051.BMOU_0483 6.3e-14 82.8 Bifidobacteriales Bacteria 2HZI7@201174,4D0IN@85004,COG0789@1,COG0789@2 NA|NA|NA K helix_turn_helix, mercury resistance KDBPDICH_00862 518635.BIFANG_03379 8e-221 773.1 Bifidobacteriales lmrB ko:K03466,ko:K18926 M00715 ko00000,ko00002,ko02000,ko03036 2.A.1.3.30,3.A.12 Bacteria 2I2QX@201174,4CZRY@85004,COG0477@1,COG0477@2 NA|NA|NA U Major Facilitator Superfamily KDBPDICH_00863 1680.BADO_1344 0.0 1565.8 Bifidobacteriales bgl2 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 GH3 Bacteria 2GJ5H@201174,4CZT6@85004,COG1472@1,COG1472@2 NA|NA|NA G Fibronectin type III-like domain KDBPDICH_00864 1680.BADO_1345 2.8e-219 767.7 Bifidobacteriales Bacteria 2IFA0@201174,4D0EP@85004,COG0477@1,COG2814@2 NA|NA|NA P Major Facilitator Superfamily KDBPDICH_00865 1680.BADO_1346 3.8e-226 790.4 Bifidobacteriales hsvB 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 2I2GF@201174,4D0FN@85004,COG1181@1,COG1181@2 NA|NA|NA M Belongs to the D-alanine--D-alanine ligase family KDBPDICH_00866 547043.BIFPSEUDO_03137 3.4e-111 407.5 Bifidobacteriales Bacteria 2ICYK@201174,4CYZC@85004,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family KDBPDICH_00867 547043.BIFPSEUDO_03138 1.2e-238 832.0 Bifidobacteriales 3.2.1.58 ko:K01210 ko00500,map00500 R00308,R03115 RC00467 ko00000,ko00001,ko01000 Bacteria 2I8WH@201174,4CZV7@85004,COG2730@1,COG2730@2 NA|NA|NA G Belongs to the glycosyl hydrolase 5 (cellulase A) family KDBPDICH_00868 547043.BIFPSEUDO_03139 0.0 1179.9 Bifidobacteriales 3.2.1.37 ko:K01198 ko00520,ko01100,map00520,map01100 R01433 RC00467 ko00000,ko00001,ko01000 GH43 Bacteria 2GIW3@201174,4D037@85004,COG3507@1,COG3507@2 NA|NA|NA G Glycosyl hydrolases family 43 KDBPDICH_00869 547043.BIFPSEUDO_03140 6e-251 872.8 Bifidobacteriales 3.2.1.58 ko:K01210 ko00500,map00500 R00308,R03115 RC00467 ko00000,ko00001,ko01000 Bacteria 2I8WH@201174,4CZV7@85004,COG2730@1,COG2730@2 NA|NA|NA G Belongs to the glycosyl hydrolase 5 (cellulase A) family KDBPDICH_00871 566552.BIFCAT_00349 0.0 1084.3 Bifidobacteriales 3.2.1.55 ko:K01209 ko00520,map00520 R01762 ko00000,ko00001,ko01000 GH51 Bacteria 2GMAK@201174,4CZS3@85004,COG3534@1,COG3534@2 NA|NA|NA G Alpha-L-arabinofuranosidase C-terminus KDBPDICH_00872 566552.BIFCAT_00348 6.1e-222 776.5 Bifidobacteriales blt ko:K03761 ko00000,ko02000 2.A.1.6.2 Bacteria 2I2GW@201174,4D2V8@85004,COG2271@1,COG2271@2 NA|NA|NA G MFS/sugar transport protein KDBPDICH_00873 566552.BIFCAT_00347 3.9e-136 490.7 Bifidobacteriales Bacteria 2IJJG@201174,4D100@85004,COG1309@1,COG1309@2 NA|NA|NA K transcriptional regulator KDBPDICH_00874 566552.BIFCAT_00346 1.9e-274 951.0 Bifidobacteriales srfJ1 3.2.1.45 ko:K01201 ko00511,ko00600,ko01100,ko04142,map00511,map00600,map01100,map04142 R01498 RC00059,RC00451 ko00000,ko00001,ko01000 GH30 Bacteria 2GMWN@201174,4CYYZ@85004,COG5520@1,COG5520@2 NA|NA|NA G Glycosyl hydrolase family 30 TIM-barrel domain KDBPDICH_00875 566552.BIFCAT_00345 7.5e-239 832.8 Bifidobacteriales Bacteria 2GJZG@201174,4CZ93@85004,COG2211@1,COG2211@2 NA|NA|NA G Transporter major facilitator family protein KDBPDICH_00876 566552.BIFCAT_00344 6.7e-113 413.3 Bifidobacteriales Bacteria 2ICY9@201174,4D0I5@85004,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family KDBPDICH_00877 547043.BIFPSEUDO_03150 0.0 1428.3 Bifidobacteriales lacZ3 3.2.1.23 ko:K01190,ko:K12308 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 Bacteria 2GK4P@201174,4CZKE@85004,COG1874@1,COG1874@2 NA|NA|NA G Beta-galactosidase trimerisation domain KDBPDICH_00878 547043.BIFPSEUDO_03151 2e-120 438.3 Bifidobacteriales Bacteria 2ICYK@201174,4CYZC@85004,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family KDBPDICH_00879 547043.BIFPSEUDO_03152 3.7e-259 900.2 Bifidobacteriales gshA 6.3.2.2 ko:K01919 ko00270,ko00480,ko01100,map00270,map00480,map01100 M00118 R00894,R10993 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJPI@201174,4CYZP@85004,COG3572@1,COG3572@2 NA|NA|NA H Glutamate-cysteine ligase family 2(GCS2) KDBPDICH_00880 547043.BIFPSEUDO_03153 0.0 2595.1 Bifidobacteriales hgdC Bacteria 2I1VH@201174,4CZ6Y@85004,COG1924@1,COG1924@2,COG3580@1,COG3580@2,COG3581@1,COG3581@2 NA|NA|NA I CoA enzyme activase uncharacterised domain (DUF2229) KDBPDICH_00881 547043.BIFPSEUDO_03154 1.5e-155 555.4 Bifidobacteriales hgdC Bacteria 2HI6K@201174,4CZN6@85004,COG1924@1,COG1924@2 NA|NA|NA I BadF/BadG/BcrA/BcrD ATPase family KDBPDICH_00882 547043.BIFPSEUDO_03155 2.4e-138 498.0 Bifidobacteriales nrdG GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008998,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0031250,GO:0032991,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046385,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576 1.97.1.4 ko:K04068 R04710 ko00000,ko01000 iE2348C_1286.E2348C_4563 Bacteria 2H0HA@201174,4CYSC@85004,COG0602@1,COG0602@2 NA|NA|NA O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine KDBPDICH_00883 566552.BIFCAT_00336 0.0 1652.1 Bifidobacteriales nrdD GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008998,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016491,GO:0016725,GO:0016728,GO:0017076,GO:0018130,GO:0019001,GO:0019103,GO:0019438,GO:0019637,GO:0019692,GO:0030554,GO:0031250,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032556,GO:0032558,GO:0032559,GO:0032560,GO:0032564,GO:0032567,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046385,GO:0046483,GO:0046872,GO:0046914,GO:0051065,GO:0055086,GO:0055114,GO:0071704,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576 1.1.98.6 ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R11633,R11634,R11635,R11636 RC00613 ko00000,ko00001,ko00002,ko01000 iECIAI39_1322.ECIAI39_4713,iPC815.YPO3454 Bacteria 2GMGA@201174,4CYV3@85004,COG1328@1,COG1328@2 NA|NA|NA F Anaerobic ribonucleoside-triphosphate reductase KDBPDICH_00884 547043.BIFPSEUDO_03157 2.6e-244 850.9 Bifidobacteriales xseA GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 3.1.11.6 ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 2GJAS@201174,4CZU4@85004,COG1570@1,COG1570@2 NA|NA|NA L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides KDBPDICH_00885 566552.BIFCAT_00334 7e-41 172.9 Bifidobacteriales xseB GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 2GR0U@201174,4D18C@85004,COG1722@1,COG1722@2 NA|NA|NA L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides KDBPDICH_00887 547043.BIFPSEUDO_03160 4.6e-202 710.3 Bifidobacteriales ko:K18353 ko01502,ko02020,map01502,map02020 M00651 ko00000,ko00001,ko00002,ko01504 Bacteria 2I2GX@201174,4CYTX@85004,COG3568@1,COG3568@2 NA|NA|NA S Endonuclease/Exonuclease/phosphatase family KDBPDICH_00888 547043.BIFPSEUDO_03161 6.1e-126 456.8 Bifidobacteriales tmp1 Bacteria 28XY7@1,2GN31@201174,2ZJU4@2,4CZQG@85004 NA|NA|NA S Domain of unknown function (DUF4391) KDBPDICH_00889 547043.BIFPSEUDO_03163 2.9e-179 634.4 Bifidobacteriales ppx GO:0003674,GO:0003824,GO:0006793,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0044237 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 R03409 RC00002 ko00000,ko00001,ko01000 Bacteria 2GMME@201174,4CYW8@85004,COG0248@1,COG0248@2 NA|NA|NA FP Ppx/GppA phosphatase family KDBPDICH_00890 547043.BIFPSEUDO_03164 3.5e-235 820.5 Bifidobacteriales aspB Bacteria 2GJ7R@201174,4CZQP@85004,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase class-V KDBPDICH_00891 547043.BIFPSEUDO_03166 6.6e-74 283.1 Bifidobacteriales vsr ko:K07458 ko00000,ko01000,ko03400 Bacteria 2IKPY@201174,4D0R6@85004,COG3727@1,COG3727@2 NA|NA|NA L May nick specific sequences that contain T G mispairs resulting from m5C-deamination KDBPDICH_00892 547043.BIFPSEUDO_03168 9e-192 676.0 Bifidobacteriales afr_2 Bacteria 2GKW0@201174,4CYXG@85004,COG0673@1,COG0673@2 NA|NA|NA S Oxidoreductase family, NAD-binding Rossmann fold KDBPDICH_00893 547043.BIFPSEUDO_03169 0.0 1183.3 Bifidobacteriales helD GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1902494 3.6.4.12 ko:K03658 ko00000,ko01000,ko03400 Bacteria 2IA1B@201174,4D066@85004,COG0210@1,COG0210@2 NA|NA|NA L Psort location Cytoplasmic, score 8.87 KDBPDICH_00894 547043.BIFPSEUDO_03170 1.2e-21 108.2 Bifidobacteriales nudG GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.6.1.55,3.6.1.65 ko:K03574,ko:K08320 ko00000,ko01000,ko03400 iE2348C_1286.E2348C_1887,iECP_1309.ECP_1705,iLF82_1304.LF82_1533,iNRG857_1313.NRG857_08815,iPC815.YPO2167,iSSON_1240.SSON_1397 Bacteria 2I2GY@201174,4D0UJ@85004,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain KDBPDICH_00895 547043.BIFPSEUDO_03172 1.1e-222 778.9 Bifidobacteriales ko:K07496 ko00000 Bacteria 2GM6K@201174,4D14G@85004,COG0675@1,COG0675@2 NA|NA|NA L Psort location Cytoplasmic, score 8.87 KDBPDICH_00896 547043.BIFPSEUDO_03173 4.1e-71 273.9 Bifidobacteriales ko:K07491 ko00000 Bacteria 2IMQ2@201174,4D1F4@85004,COG1943@1,COG1943@2 NA|NA|NA L Transposase IS200 like KDBPDICH_00897 547043.BIFPSEUDO_03174 5.4e-104 383.6 Bifidobacteriales Bacteria 2GJ4Y@201174,4CZNN@85004,COG1061@1,COG1061@2 NA|NA|NA KL Domain of unknown function (DUF3427) KDBPDICH_00898 547043.BIFPSEUDO_03175 1.7e-262 911.4 Bifidobacteriales Bacteria 2I4ZJ@201174,4D2X3@85004,COG3587@1,COG3587@2 NA|NA|NA V Domain of unknown function (DUF3427) KDBPDICH_00899 547043.BIFPSEUDO_03177 1.5e-76 292.0 Bifidobacteriales Bacteria 29SSD@1,2IJ1J@201174,30DYB@2,4D0SG@85004 NA|NA|NA KDBPDICH_00900 547043.BIFPSEUDO_03178 2e-71 275.0 Bifidobacteriales Bacteria 2IFD2@201174,4D0RX@85004,COG3428@1,COG3428@2 NA|NA|NA S Bacterial PH domain KDBPDICH_00901 547043.BIFPSEUDO_03180 7.4e-247 859.4 Bifidobacteriales Bacteria 2GJ39@201174,4CZC0@85004,COG4279@1,COG4279@2 NA|NA|NA S zinc finger KDBPDICH_00903 547043.BIFPSEUDO_03207 1.3e-72 279.3 Bifidobacteriales Bacteria 2A9VD@1,2I88K@201174,30Z38@2,4D0A0@85004 NA|NA|NA S GtrA-like protein KDBPDICH_00904 547043.BIFPSEUDO_03208 0.0 1586.6 Bifidobacteriales 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 GH3 Bacteria 2GJ5H@201174,4CZ2P@85004,COG1472@1,COG1472@2 NA|NA|NA G Glycosyl hydrolase family 3 N-terminal domain protein KDBPDICH_00905 547043.BIFPSEUDO_03209 3.2e-119 434.5 Bifidobacteriales ybjG GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0042221,GO:0044464,GO:0046677,GO:0050380,GO:0050896,GO:0071944 3.6.1.27 ko:K06153,ko:K19302 ko00550,map00550 R05627 RC00002 ko00000,ko00001,ko01000,ko01011 iEC042_1314.EC042_0932 Bacteria 2GNTK@201174,4D0FE@85004,COG0671@1,COG0671@2 NA|NA|NA I Psort location CytoplasmicMembrane, score KDBPDICH_00906 547043.BIFPSEUDO_03210 6.9e-80 303.1 Bifidobacteriales ypeA 2.3.1.1 ko:K03826,ko:K22477 ko00220,ko01210,ko01230,map00220,map01210,map01230 M00028 R00259 RC00004,RC00064 ko00000,ko00001,ko00002,ko01000 Bacteria 2IHRD@201174,4D10V@85004,COG0454@1,COG0456@2 NA|NA|NA K Psort location Cytoplasmic, score 8.87 KDBPDICH_00907 1680.BADO_0941 2.6e-112 411.4 Bifidobacteriales vex2 ko:K02003,ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2I7UV@201174,4CZ1C@85004,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein KDBPDICH_00908 566552.BIFCAT_01413 3e-210 737.6 Bifidobacteriales vex1 ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2IA7B@201174,4CZJM@85004,COG0577@1,COG0577@2 NA|NA|NA V Efflux ABC transporter, permease protein KDBPDICH_00909 566552.BIFCAT_01412 4.6e-239 833.6 Bifidobacteriales vex3 ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2I99G@201174,4D0H6@85004,COG0577@1,COG0577@2 NA|NA|NA V ABC transporter permease KDBPDICH_00910 566552.BIFCAT_01411 5.9e-264 916.4 Bifidobacteriales lacS ko:K03292,ko:K11104,ko:K16209 ko00000,ko02000 2.A.2,2.A.2.1,2.A.2.2 Bacteria 2HD4Y@201174,4CZRA@85004,COG2211@1,COG2211@2 NA|NA|NA G Psort location CytoplasmicMembrane, score 10.00 KDBPDICH_00911 566552.BIFCAT_01410 0.0 2112.4 Bifidobacteriales lacL 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 Bacteria 2GMAT@201174,4CYYS@85004,COG3250@1,COG3250@2 NA|NA|NA G Psort location Cytoplasmic, score 8.87 KDBPDICH_00912 547043.BIFPSEUDO_03227 1.9e-52 212.6 Bifidobacteriales ko:K02529,ko:K17640 ko00000,ko03000 Bacteria 2GJRG@201174,4CZI0@85004,COG1609@1,COG1609@2 NA|NA|NA K Bacterial regulatory proteins, lacI family KDBPDICH_00913 547043.BIFPSEUDO_04260 1.1e-11 75.5 Bifidobacteriales Bacteria 2B4NV@1,2HB5J@201174,325VP@2,4D2KK@85004 NA|NA|NA S Psort location Extracellular, score 8.82 KDBPDICH_00914 566552.BIFCAT_01407 0.0 1090.5 Bifidobacteriales trxB1 1.8.1.9 ko:K00384 ko00450,map00450 R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 Bacteria 2GKD2@201174,4CZ6G@85004,COG0492@1,COG0492@2,COG3634@1,COG3634@2 NA|NA|NA C Thioredoxin domain KDBPDICH_00915 547043.BIFPSEUDO_04262 1.9e-106 391.7 Bifidobacteriales ahpC 1.11.1.15 ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 Bacteria 2GM74@201174,4CZXS@85004,COG0450@1,COG0450@2 NA|NA|NA O C-terminal domain of 1-Cys peroxiredoxin KDBPDICH_00916 1680.BADO_1467 1.8e-183 648.3 Bifidobacteriales Bacteria 28Q1R@1,2IIRX@201174,2ZCK0@2,4D1XZ@85004 NA|NA|NA KDBPDICH_00917 547043.BIFPSEUDO_03497 1.7e-223 781.6 Bifidobacteriales 2.1.1.72 ko:K00571,ko:K03497 ko00000,ko01000,ko02048,ko03000,ko03036,ko04812 Bacteria 2GNZR@201174,4D1DE@85004,COG0863@1,COG0863@2 NA|NA|NA L Belongs to the N(4) N(6)-methyltransferase family KDBPDICH_00918 1680.BADO_1469 1.1e-23 115.2 Bifidobacteriales relB ko:K07473 ko00000,ko02048 Bacteria 2GRBT@201174,4D1GU@85004,COG3077@1,COG3077@2 NA|NA|NA L RelB antitoxin KDBPDICH_00919 547043.BIFPSEUDO_03495 1.8e-203 714.9 Bifidobacteriales Bacteria 2IF22@201174,4D0MK@85004,COG3677@1,COG3677@2 NA|NA|NA L Transposase KDBPDICH_00920 764298.STRMA_0402 5e-107 394.4 Bacilli Bacteria 1TQXV@1239,4HD04@91061,COG4974@1,COG4974@2 NA|NA|NA L Belongs to the 'phage' integrase family KDBPDICH_00921 411483.FAEPRAA2165_00815 3.5e-08 63.5 Clostridia 3.1.21.3 ko:K01154 ko00000,ko01000,ko02048 Bacteria 1UG01@1239,24SB9@186801,COG0732@1,COG0732@2 NA|NA|NA V Type I restriction modification DNA specificity domain protein KDBPDICH_00922 1121934.AUDX01000068_gene2395 2.8e-180 638.3 Microbacteriaceae tnp7109-2 Bacteria 2GM8F@201174,4FMJD@85023,COG3328@1,COG3328@2 NA|NA|NA L Transposase, Mutator family KDBPDICH_00923 471855.Shel_17670 1.2e-245 855.5 Coriobacteriia hsdM 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 2GKAQ@201174,4CURP@84998,COG0286@1,COG0286@2 NA|NA|NA V HsdM N-terminal domain KDBPDICH_00924 471855.Shel_17680 0.0 1698.3 Coriobacteriia hsdR 3.1.21.3 ko:K01153 ko00000,ko01000,ko02048 Bacteria 2HI69@201174,4CVYG@84998,COG0610@1,COG0610@2 NA|NA|NA L Subunit R is required for both nuclease and ATPase activities, but not for modification KDBPDICH_00925 1193128.A200_05257 5.1e-37 161.0 Actinobacteria pcrA1 3.6.4.12 ko:K03657,ko:K16898 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 2H52U@201174,COG0210@1,COG0210@2 NA|NA|NA F DNA helicase KDBPDICH_00926 401473.BDP_0700 8.2e-101 373.2 Bifidobacteriales ko:K10009 ko02010,map02010 M00234 ko00000,ko00001,ko00002,ko02000 3.A.1.3.10,3.A.1.3.14 Bacteria 2GJJ9@201174,4CZIX@85004,COG0765@1,COG0765@2 NA|NA|NA E Binding-protein-dependent transport system inner membrane component KDBPDICH_00927 78346.BRUM_1281 1.4e-121 442.6 Bifidobacteriales tcyA ko:K02424,ko:K10009 ko02010,map02010 M00234 ko00000,ko00001,ko00002,ko02000,ko02035 3.A.1.3.10,3.A.1.3.14 Bacteria 2GJQW@201174,4D0FX@85004,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial periplasmic substrate-binding proteins KDBPDICH_00928 78346.BRUM_1282 3.2e-115 421.4 Bifidobacteriales 3.6.3.21 ko:K02028,ko:K10010,ko:K16963 ko02010,map02010 M00234,M00236,M00586 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.10,3.A.1.3.14 Bacteria 2GIZW@201174,4D0CN@85004,COG1126@1,COG1126@2 NA|NA|NA E ATPases associated with a variety of cellular activities KDBPDICH_00929 78346.BRUM_1283 1e-194 686.0 Bifidobacteriales metC 4.4.1.8 ko:K01760 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ5S@201174,4CZKK@85004,COG0626@1,COG0626@2 NA|NA|NA E Cys/Met metabolism PLP-dependent enzyme KDBPDICH_00931 552531.BIF_02196 2.9e-18 97.4 Bifidobacteriales relB ko:K07473,ko:K18918 ko00000,ko02048,ko03000 Bacteria 2GV25@201174,4D179@85004,COG3077@1,COG3077@2 NA|NA|NA L RelB antitoxin KDBPDICH_00933 547043.BIFPSEUDO_03481 2.5e-305 1053.9 Bifidobacteriales pyk GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016043,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042802,GO:0042866,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 e_coli_core.b1854,iAF1260.b1854,iB21_1397.B21_01813,iBWG_1329.BWG_1668,iEC042_1314.EC042_2021,iECBD_1354.ECBD_1784,iECB_1328.ECB_01825,iECDH10B_1368.ECDH10B_1995,iECDH1ME8569_1439.ECDH1ME8569_1801,iECD_1391.ECD_01825,iECO103_1326.ECO103_2044,iECO111_1330.ECO111_2362,iECO26_1355.ECO26_2692,iECUMN_1333.ECUMN_2152,iETEC_1333.ETEC_1887,iEcDH1_1363.EcDH1_1786,iEcE24377_1341.EcE24377A_2084,iEcHS_1320.EcHS_A1947,iEcSMS35_1347.EcSMS35_1332,iEcolC_1368.EcolC_1778,iG2583_1286.G2583_2306,iJO1366.b1854,iJR904.b1854,iSBO_1134.SBO_1162,iSSON_1240.SSON_1294,iSbBS512_1146.SbBS512_E2130,iUMNK88_1353.UMNK88_2326,iY75_1357.Y75_RS09740 Bacteria 2GJY8@201174,4CZA8@85004,COG0469@1,COG0469@2 NA|NA|NA G Pyruvate kinase KDBPDICH_00934 547043.BIFPSEUDO_03480 8.8e-176 622.9 Bifidobacteriales terC ko:K05794 ko00000 Bacteria 2GIWU@201174,4CYW2@85004,COG0861@1,COG0861@2 NA|NA|NA P Integral membrane protein, TerC family KDBPDICH_00935 547043.BIFPSEUDO_03479 0.0 1376.3 Bifidobacteriales uvrB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K03702,ko:K08999 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 2GJ03@201174,4CZR0@85004,COG0556@1,COG0556@2 NA|NA|NA L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage KDBPDICH_00936 547043.BIFPSEUDO_03478 3.4e-115 421.0 Bifidobacteriales coaE GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 2GN96@201174,4D0PG@85004,COG0237@1,COG0237@2 NA|NA|NA H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A KDBPDICH_00937 547043.BIFPSEUDO_03477 8.3e-255 885.9 Bifidobacteriales rpsA ko:K02945 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GJAK@201174,4CZ6S@85004,COG0539@1,COG0539@2 NA|NA|NA J Ribosomal protein S1 KDBPDICH_00938 547043.BIFPSEUDO_03476 1.9e-161 575.1 Bifidobacteriales folD GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJZS@201174,4CZ53@85004,COG0190@1,COG0190@2 NA|NA|NA F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate KDBPDICH_00939 547043.BIFPSEUDO_03475 1.3e-172 612.5 Bifidobacteriales ko:K02077 M00244 ko00000,ko00002,ko02000 3.A.1.15 Bacteria 2GM1K@201174,4CZ99@85004,COG0803@1,COG0803@2 NA|NA|NA P Zinc-uptake complex component A periplasmic KDBPDICH_00940 547043.BIFPSEUDO_03474 2e-160 571.6 Bifidobacteriales znuC ko:K02074,ko:K09817 ko02010,map02010 M00242,M00244 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 Bacteria 2GP3A@201174,4CZEV@85004,COG1121@1,COG1121@2 NA|NA|NA P ATPases associated with a variety of cellular activities KDBPDICH_00941 547043.BIFPSEUDO_03473 3.9e-140 504.2 Bifidobacteriales znuB ko:K02075,ko:K09816 ko02010,map02010 M00242,M00244 ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 Bacteria 2GJ7H@201174,4CYTG@85004,COG1108@1,COG1108@2 NA|NA|NA U ABC 3 transport family KDBPDICH_00942 547043.BIFPSEUDO_03472 7.8e-88 329.7 Bifidobacteriales ispF GO:0003674,GO:0003824,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008685,GO:0009058,GO:0009987,GO:0016114,GO:0016829,GO:0016849,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0051483,GO:0071704,GO:1901576 2.1.1.228,2.7.7.60,4.6.1.12 ko:K00554,ko:K01770,ko:K12506 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R00597,R05633,R05637 RC00002,RC00003,RC00334,RC01440 ko00000,ko00001,ko00002,ko01000,ko03016 iNJ661.Rv3581c Bacteria 2II8H@201174,4D0X6@85004,COG0245@1,COG0245@2 NA|NA|NA H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) KDBPDICH_00943 547043.BIFPSEUDO_03471 3e-102 377.9 Bifidobacteriales carD GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009405,GO:0009605,GO:0009987,GO:0009991,GO:0015968,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0040007,GO:0042594,GO:0044419,GO:0050896,GO:0051704,GO:0051716,GO:0071496 ko:K07736 ko00000,ko03000 Bacteria 2GKSU@201174,4CZXD@85004,COG1329@1,COG1329@2 NA|NA|NA K CarD-like/TRCF domain KDBPDICH_00944 547043.BIFPSEUDO_03470 0.0 1603.2 Bifidobacteriales glgB GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 ko00000,ko00001,ko00002,ko01000,ko04147 CBM48,GH13 Bacteria 2GJ5C@201174,4CZMD@85004,COG0296@1,COG0296@2 NA|NA|NA G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position KDBPDICH_00945 547043.BIFPSEUDO_03469 2e-129 468.4 Bifidobacteriales Bacteria 2GJE6@201174,4CZS5@85004,COG0745@1,COG0745@2 NA|NA|NA T Response regulator receiver domain protein KDBPDICH_00946 547043.BIFPSEUDO_03468 6.8e-188 663.3 Bifidobacteriales Bacteria 2GIX7@201174,4CZNA@85004,COG5002@1,COG5002@2 NA|NA|NA T ATPase histidine kinase DNA gyrase B HSP90 domain protein KDBPDICH_00947 547043.BIFPSEUDO_03467 5.8e-90 337.0 Bifidobacteriales ctsW ko:K02242 M00429 ko00000,ko00002,ko02044 Bacteria 2I9PA@201174,4D11A@85004,COG1040@1,COG1040@2 NA|NA|NA S Phosphoribosyl transferase domain KDBPDICH_00948 547043.BIFPSEUDO_03466 1.1e-152 545.8 Bifidobacteriales cof 5.2.1.8 ko:K01802 ko00000,ko01000 Bacteria 2HZD0@201174,4CZ4N@85004,COG0561@1,COG0561@2 NA|NA|NA T Eukaryotic phosphomannomutase KDBPDICH_00949 1680.BADO_0706 1.5e-71 275.4 Bifidobacteriales MA20_43655 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 Bacteria 2IS6W@201174,4D0YK@85004,COG3824@1,COG3824@2 NA|NA|NA S Zincin-like metallopeptidase KDBPDICH_00950 547043.BIFPSEUDO_03463 6.7e-223 780.0 Bifidobacteriales Bacteria 2DNQG@1,2I2FY@201174,32YJZ@2,4CZE9@85004 NA|NA|NA KDBPDICH_00951 547043.BIFPSEUDO_03462 0.0 1968.4 Bifidobacteriales Bacteria 2I2FX@201174,4CYVM@85004,COG1216@1,COG1216@2,COG5617@1,COG5617@2 NA|NA|NA S Glycosyl transferase, family 2 KDBPDICH_00952 547043.BIFPSEUDO_03461 3.4e-54 217.2 Bifidobacteriales whiB ko:K18955 ko00000,ko03000 Bacteria 2CC1Y@1,2IQ4Q@201174,32RUK@2,4D12I@85004 NA|NA|NA K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA KDBPDICH_00953 547043.BIFPSEUDO_03460 1.7e-199 702.2 Bifidobacteriales Bacteria 2GJM3@201174,4CZ5B@85004,COG1316@1,COG1316@2 NA|NA|NA K Cell envelope-related transcriptional attenuator domain KDBPDICH_00955 547043.BIFPSEUDO_03458 3.4e-169 600.9 Bifidobacteriales Bacteria 2GJJJ@201174,4CYQY@85004,COG1316@1,COG1316@2 NA|NA|NA K Cell envelope-related transcriptional attenuator domain KDBPDICH_00956 547043.BIFPSEUDO_03457 0.0 1179.9 Bifidobacteriales ko:K03466 ko00000,ko03036 3.A.12 Bacteria 2GJBR@201174,4CYU3@85004,COG1674@1,COG1674@2 NA|NA|NA D FtsK/SpoIIIE family KDBPDICH_00957 1437610.BREU_1071 1.9e-46 191.4 Bifidobacteriales whiB GO:0000302,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0010035,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015035,GO:0015036,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042221,GO:0042493,GO:0045892,GO:0045934,GO:0047134,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0060255,GO:0065007,GO:0071731,GO:0080090,GO:0097159,GO:0097366,GO:1901363,GO:1901698,GO:1901700,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K18955 ko00000,ko03000 Bacteria 2DMIE@1,2IQCG@201174,32RSG@2,4D11W@85004 NA|NA|NA K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA KDBPDICH_00958 547043.BIFPSEUDO_03455 6e-277 959.5 Bifidobacteriales pdtaS GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 ko:K00936 M00839 ko00000,ko00002,ko01000,ko01001,ko02022 Bacteria 2GKMP@201174,4CYV1@85004,COG3920@1,COG3920@2 NA|NA|NA T ATPase histidine kinase DNA gyrase B HSP90 domain protein KDBPDICH_00959 547043.BIFPSEUDO_03454 2.7e-144 518.1 Bifidobacteriales yplQ ko:K11068 ko00000,ko02042 Bacteria 2GJGQ@201174,4CZGT@85004,COG1272@1,COG1272@2 NA|NA|NA S Haemolysin-III related KDBPDICH_00960 547043.BIFPSEUDO_03453 2.6e-80 304.7 Bifidobacteriales greA GO:0001098,GO:0001108,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006354,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030312,GO:0031323,GO:0031326,GO:0032774,GO:0032784,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 ko:K03624 ko00000,ko03021 Bacteria 2GNZV@201174,4D0QM@85004,COG0782@1,COG0782@2 NA|NA|NA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides KDBPDICH_00961 566552.BIFCAT_01064 1.2e-73 282.3 Bifidobacteriales fkbP 5.2.1.8 ko:K01802 ko00000,ko01000 Bacteria 2GJK2@201174,4D0V6@85004,COG0545@1,COG0545@2 NA|NA|NA G Peptidyl-prolyl cis-trans KDBPDICH_00962 547043.BIFPSEUDO_03451 5.5e-283 979.5 Bifidobacteriales sdaA 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 Bacteria 2GJPA@201174,4CZ6I@85004,COG1760@1,COG1760@2 NA|NA|NA E Serine dehydratase alpha chain KDBPDICH_00963 547043.BIFPSEUDO_03450 1.8e-91 342.0 Bifidobacteriales Bacteria 2ASIR@1,2IHD9@201174,31HZA@2,4D0QP@85004 NA|NA|NA KDBPDICH_00965 547043.BIFPSEUDO_03448 4.4e-183 647.1 Bifidobacteriales ppx GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 R03409 RC00002 ko00000,ko00001,ko01000 Bacteria 2GJBN@201174,4CZCS@85004,COG0248@1,COG0248@2 NA|NA|NA FP Ppx/GppA phosphatase family KDBPDICH_00966 547043.BIFPSEUDO_03447 2e-103 381.7 Bifidobacteriales ppx2 3.6.1.11,3.6.1.40 ko:K01524,ko:K09009 ko00230,map00230 R03409 RC00002 ko00000,ko00001,ko01000 Bacteria 2I8CS@201174,4CZQX@85004,COG1507@1,COG1507@2 NA|NA|NA S Protein of unknown function (DUF501) KDBPDICH_00967 547043.BIFPSEUDO_03446 2e-71 275.4 Bifidobacteriales divIC ko:K05589,ko:K13052 ko00000,ko03036 Bacteria 2IR5G@201174,4D0SS@85004,COG2919@1,COG2919@2 NA|NA|NA D Septum formation initiator KDBPDICH_00968 547043.BIFPSEUDO_03445 1.5e-244 851.7 Bifidobacteriales eno 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Bacteria 2GJAY@201174,4CYT3@85004,COG0148@1,COG0148@2 NA|NA|NA G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis KDBPDICH_00969 547043.BIFPSEUDO_03444 0.0 2313.9 Bifidobacteriales mfd ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Bacteria 2GJ42@201174,4CZ8X@85004,COG1197@1,COG1197@2 NA|NA|NA L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site KDBPDICH_00970 547043.BIFPSEUDO_03443 1.7e-113 415.2 Bifidobacteriales pth GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016788,GO:0040007,GO:0044464,GO:0052689,GO:0071944,GO:0140098,GO:0140101 3.1.1.29 ko:K01056 ko00000,ko01000,ko03012 Bacteria 2GKCV@201174,4CZBE@85004,COG0193@1,COG0193@2 NA|NA|NA J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis KDBPDICH_00971 566552.BIFCAT_01074 3.3e-103 380.9 Bifidobacteriales 2.3.1.183 ko:K03823 ko00440,ko01130,map00440,map01130 R08871,R08938 RC00004,RC00064 ko00000,ko00001,ko01000 Bacteria 2HZCB@201174,4CZQI@85004,COG1247@1,COG1247@2 NA|NA|NA M Acetyltransferase (GNAT) domain KDBPDICH_00972 547043.BIFPSEUDO_03441 0.0 1967.2 Bifidobacteriales GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K09118 ko00000 Bacteria 2GMP3@201174,4CYW1@85004,COG1615@1,COG1615@2 NA|NA|NA S Uncharacterised protein family (UPF0182) KDBPDICH_00973 547043.BIFPSEUDO_03440 4e-178 630.9 Bifidobacteriales ybbD 3.2.1.52 ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 M00628 R00022,R05963,R07809,R07810,R10831 RC00049 ko00000,ko00001,ko00002,ko01000 Bacteria 2GM43@201174,4CZ6R@85004,COG1472@1,COG1472@2 NA|NA|NA G Glycosyl hydrolase family 3 N-terminal domain protein KDBPDICH_00974 547043.BIFPSEUDO_03439 6.2e-40 169.5 Bifidobacteriales ybdD Bacteria 2GQWY@201174,4D1IG@85004,COG2879@1,COG2879@2 NA|NA|NA S Selenoprotein, putative KDBPDICH_00975 547043.BIFPSEUDO_03438 0.0 1513.4 Bifidobacteriales cstA GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042594,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071944 ko:K06200 ko00000 Bacteria 2GIYX@201174,4CZWH@85004,COG1966@1,COG1966@2 NA|NA|NA T 5TM C-terminal transporter carbon starvation CstA KDBPDICH_00976 547043.BIFPSEUDO_03437 3.2e-53 214.2 Bifidobacteriales azlD Bacteria 2HZNQ@201174,4D12M@85004,COG1687@1,COG1687@2 NA|NA|NA E Branched-chain amino acid transport protein (AzlD) KDBPDICH_00977 547043.BIFPSEUDO_03436 8.8e-142 509.6 Bifidobacteriales azlC Bacteria 2HZA0@201174,4CZ7Q@85004,COG1296@1,COG1296@2 NA|NA|NA E AzlC protein KDBPDICH_00978 547043.BIFPSEUDO_03435 1.7e-87 329.3 Bifidobacteriales Bacteria 2GN7I@201174,4CZ0M@85004,COG5434@1,COG5434@2 NA|NA|NA M Protein of unknown function (DUF3737) KDBPDICH_00979 547043.BIFPSEUDO_03434 8.4e-84 316.2 Bifidobacteriales dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106026,GO:0106074,GO:0140098,GO:0140101,GO:1901360 ko:K07560 ko00000,ko01000,ko03016 Bacteria 2IKVR@201174,4D0VE@85004,COG1490@1,COG1490@2 NA|NA|NA J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality KDBPDICH_00980 547043.BIFPSEUDO_03432 8.4e-145 519.6 Bifidobacteriales pgl GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0071944,GO:0072524,GO:1901135,GO:1901360,GO:1901564 3.1.1.31,3.5.99.6 ko:K01057,ko:K02003,ko:K02564 ko00030,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00520,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008,M00258 R00765,R02035 RC00163,RC00537 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1 Bacteria 2GMQ2@201174,4CZRG@85004,COG0363@1,COG0363@2 NA|NA|NA G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KDBPDICH_00981 547043.BIFPSEUDO_03431 2.6e-180 637.9 Bifidobacteriales opcA Bacteria 2GJ1H@201174,4CZI4@85004,COG3429@1,COG3429@2 NA|NA|NA G Glucose-6-phosphate dehydrogenase subunit KDBPDICH_00982 566552.BIFCAT_01084 3.6e-304 1050.0 Bifidobacteriales zwf 1.1.1.363,1.1.1.49 ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 M00004,M00006,M00008 R00835,R02736,R10907 RC00001,RC00066 ko00000,ko00001,ko00002,ko01000,ko04147 iIT341.HP1101 Bacteria 2GISI@201174,4CYQM@85004,COG0364@1,COG0364@2 NA|NA|NA G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone KDBPDICH_00983 547043.BIFPSEUDO_03429 3.5e-235 820.5 Bifidobacteriales patB 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 Bacteria 2GJFQ@201174,4CZFH@85004,COG1168@1,COG1168@2 NA|NA|NA E Aminotransferase, class I II KDBPDICH_00984 547043.BIFPSEUDO_03427 1.2e-146 525.8 Bifidobacteriales ko:K07124 ko00000 Bacteria 2GKJE@201174,4CZUC@85004,COG0300@1,COG0300@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family KDBPDICH_00985 547043.BIFPSEUDO_03426 1.2e-277 961.8 Bifidobacteriales gnd GO:0003674,GO:0003824,GO:0004616,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019362,GO:0019520,GO:0019521,GO:0019637,GO:0019682,GO:0019693,GO:0019752,GO:0032787,GO:0034641,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046176,GO:0046177,GO:0046395,GO:0046483,GO:0046496,GO:0046983,GO:0051156,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072329,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 iECS88_1305.ECS88_2128,iECW_1372.ECW_m2189,iEKO11_1354.EKO11_1765,iPC815.YPO1541,iWFL_1372.ECW_m2189 Bacteria 2GJ2J@201174,4CZFG@85004,COG0362@1,COG0362@2 NA|NA|NA H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH KDBPDICH_00986 566552.BIFCAT_01098 0.0 1669.8 Bifidobacteriales lysX Bacteria 2GM2C@201174,4CYW5@85004,COG2898@1,COG2898@2 NA|NA|NA S Uncharacterised conserved protein (DUF2156) KDBPDICH_00987 566552.BIFCAT_01100 1.1e-259 902.1 Bifidobacteriales Bacteria 2GP6Q@201174,4CYXF@85004,COG0627@1,COG0627@2 NA|NA|NA S Putative esterase KDBPDICH_00988 547043.BIFPSEUDO_03421 1.2e-34 152.1 Bifidobacteriales Bacteria 2ADTQ@1,2HDB8@201174,313JB@2,4D2IT@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00989 547043.BIFPSEUDO_03420 6.7e-142 510.0 Bifidobacteriales ybbL ko:K01990,ko:K02003,ko:K02068,ko:K05685 ko02010,map02010 M00211,M00254,M00258,M00709 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.122.1,3.A.1.122.12 Bacteria 2I8QP@201174,4CZZG@85004,COG1136@1,COG1136@2 NA|NA|NA V ATPases associated with a variety of cellular activities KDBPDICH_00990 566552.BIFCAT_01103 4.6e-135 487.3 Bifidobacteriales ybbM ko:K02069 M00211 ko00000,ko00002,ko02000 9.B.25.1 Bacteria 2GMHX@201174,4CYRQ@85004,COG0390@1,COG0390@2 NA|NA|NA V Uncharacterised protein family (UPF0014) KDBPDICH_00991 566552.BIFCAT_01104 1.2e-275 955.7 Bifidobacteriales deaD 3.6.4.13 ko:K05592,ko:K11927 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 2GIUR@201174,4CZ4K@85004,COG0513@1,COG0513@2 NA|NA|NA JKL helicase superfamily c-terminal domain KDBPDICH_00992 547043.BIFPSEUDO_03417 2.1e-126 458.4 Bifidobacteriales Bacteria 2GMGQ@201174,4CZA7@85004,COG4221@1,COG4221@2 NA|NA|NA S Enoyl-(Acyl carrier protein) reductase KDBPDICH_00993 547043.BIFPSEUDO_03415 2.9e-227 794.3 Bifidobacteriales rutG GO:0003674,GO:0005215,GO:0005350,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0006810,GO:0006855,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0015205,GO:0015210,GO:0015238,GO:0015851,GO:0015855,GO:0015857,GO:0015893,GO:0016020,GO:0016021,GO:0017144,GO:0019860,GO:0022857,GO:0031224,GO:0031226,GO:0034641,GO:0042221,GO:0042493,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072527,GO:0072529,GO:0072531,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1903791,GO:1904082 ko:K02824,ko:K03458,ko:K09016 ko00000,ko02000 2.A.40,2.A.40.1.1,2.A.40.1.2,2.A.40.1.3 iECO103_1326.ECO103_1052,iECUMN_1333.ECUMN_1189 Bacteria 2GMH6@201174,4CZR8@85004,COG2233@1,COG2233@2 NA|NA|NA F Permease family KDBPDICH_00994 547043.BIFPSEUDO_03414 7.3e-160 569.7 Bifidobacteriales 3.1.3.73 ko:K02226,ko:K07814 ko00860,ko01100,map00860,map01100 M00122 R04594,R11173 RC00017 ko00000,ko00001,ko00002,ko01000,ko02022 Bacteria 2GN7B@201174,4CZFM@85004,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family KDBPDICH_00995 547043.BIFPSEUDO_03412 1.4e-141 508.8 Bifidobacteriales Bacteria 2I2FW@201174,4CYW3@85004,COG2207@1,COG2207@2 NA|NA|NA K helix_turn_helix, arabinose operon control protein KDBPDICH_00996 547043.BIFPSEUDO_03411 0.0 2100.5 Bifidobacteriales hsdR 3.1.21.3 ko:K01153 ko00000,ko01000,ko02048 Bacteria 2HI69@201174,4CZER@85004,COG0610@1,COG0610@2 NA|NA|NA V Subunit R is required for both nuclease and ATPase activities, but not for modification KDBPDICH_00997 1680.BADO_0655 3.1e-81 307.8 Bifidobacteriales ko:K09935 ko00000 Bacteria 2HQRT@201174,4D04N@85004,COG3236@2,COG5113@1 NA|NA|NA O peptidyl-tyrosine sulfation KDBPDICH_00998 566552.BIFCAT_00303 3.8e-72 277.3 Bifidobacteriales Bacteria 29AZ1@1,2IDRR@201174,2ZXY1@2,4D0MM@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_00999 547043.BIFPSEUDO_03407 2e-120 438.3 Bifidobacteriales Bacteria 2C83V@1,2I2FV@201174,2Z8U2@2,4CZW1@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_01000 547043.BIFPSEUDO_04478 1.4e-143 516.2 Bifidobacteriales 3.1.21.3 ko:K01154 ko00000,ko01000,ko02048 Bacteria 2IKB8@201174,4D2TZ@85004,COG0732@1,COG0732@2 NA|NA|NA V type I restriction enzyme, S subunit K01154 KDBPDICH_01001 547043.BIFPSEUDO_03409 0.0 1667.1 Bifidobacteriales hsdM 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 2GKAQ@201174,4CZNR@85004,COG0286@1,COG0286@2 NA|NA|NA V modification (methylase) protein of type I restriction-modification system K03427 KDBPDICH_01002 78345.BMERY_0844 4.4e-189 667.5 Bifidobacteriales hsdS-1 3.1.21.3 ko:K01154 ko00000,ko01000,ko02048 Bacteria 2HUXN@201174,4CZ21@85004,COG0582@1,COG0582@2,COG0732@1,COG0732@2 NA|NA|NA L Phage integrase family KDBPDICH_01003 566552.BIFCAT_01933 1.2e-144 519.2 Bifidobacteriales ko:K07090 ko00000 Bacteria 2GJCC@201174,4CZ65@85004,COG0730@1,COG0730@2 NA|NA|NA S Sulfite exporter TauE/SafE KDBPDICH_01004 566552.BIFCAT_01932 6.2e-92 343.6 Bifidobacteriales ko:K16788 ko00000,ko02000 2.A.88.5 Bacteria 298ZI@1,2GP6V@201174,2ZW3A@2,4D056@85004 NA|NA|NA S ECF transporter, substrate-specific component KDBPDICH_01005 547043.BIFPSEUDO_04446 1.4e-112 412.1 Bifidobacteriales 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 2HZFA@201174,4D08J@85004,COG0572@1,COG0572@2 NA|NA|NA F uridine kinase KDBPDICH_01006 547043.BIFPSEUDO_04445 2.6e-174 617.8 Bifidobacteriales korD 1.2.7.3 ko:K00176,ko:K07138 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 2IBJZ@201174,4CZFQ@85004,COG2768@1,COG2768@2 NA|NA|NA C Domain of unknown function (DUF362) KDBPDICH_01007 547043.BIFPSEUDO_04444 3.2e-226 790.8 Bifidobacteriales ko:K03315 ko00000,ko02000 2.A.35 Bacteria 2I8CQ@201174,4CZ4U@85004,COG1757@1,COG1757@2 NA|NA|NA C Na H antiporter family protein KDBPDICH_01008 1680.BADO_0648 2.4e-179 634.8 Bifidobacteriales MA20_14895 Bacteria 2GS6E@201174,4CZWB@85004,COG2855@1,COG2855@2 NA|NA|NA S Conserved hypothetical protein 698 KDBPDICH_01010 547043.BIFPSEUDO_04441 2e-120 438.7 Bifidobacteriales Bacteria 2AUIM@1,2IKCM@201174,31K74@2,4D0UW@85004 NA|NA|NA KDBPDICH_01011 547043.BIFPSEUDO_04439 0.0 1255.0 Bifidobacteriales cysB 4.2.1.22 ko:K01697,ko:K18926 ko00260,ko00270,ko01100,ko01130,ko01230,map00260,map00270,map01100,map01130,map01230 M00035,M00338,M00715 R00891,R01290,R04942 RC00056,RC00069,RC00256,RC00489,RC01246 ko00000,ko00001,ko00002,ko01000,ko02000 2.A.1.3.30 Bacteria 2GIZX@201174,4CZWX@85004,COG0477@1,COG0517@1,COG0517@2,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_01012 547043.BIFPSEUDO_04438 5.9e-12 75.5 Bifidobacteriales Bacteria 29G83@1,2GQWW@201174,3035W@2,4D1G9@85004 NA|NA|NA KDBPDICH_01013 547043.BIFPSEUDO_04437 6.8e-26 122.5 Bifidobacteriales yccF Bacteria 2H931@201174,4D2ET@85004,COG3304@1,COG3304@2 NA|NA|NA S Inner membrane component domain KDBPDICH_01014 547043.BIFPSEUDO_04436 4.7e-202 710.3 Bifidobacteriales ychF GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 ko:K06942 ko00000,ko03009 Bacteria 2GIXI@201174,4CZBU@85004,COG0012@1,COG0012@2 NA|NA|NA J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner KDBPDICH_01015 547043.BIFPSEUDO_04435 1.4e-142 512.3 Bifidobacteriales proC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_0899,iIT341.HP1158 Bacteria 2GJ7D@201174,4CZIV@85004,COG0345@1,COG0345@2 NA|NA|NA E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline KDBPDICH_01016 547043.BIFPSEUDO_04434 9.9e-271 938.7 Bifidobacteriales pip 3.4.11.5 ko:K01259 ko00330,map00330 R00135 ko00000,ko00001,ko01000,ko01002 Bacteria 2GK03@201174,4CZ9T@85004,COG0596@1,COG0596@2 NA|NA|NA S alpha/beta hydrolase fold KDBPDICH_01017 547043.BIFPSEUDO_04433 0.0 1612.8 Bifidobacteriales tcsS2 Bacteria 2GJEG@201174,4CZ1M@85004,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase KDBPDICH_01018 547043.BIFPSEUDO_04432 1.9e-130 471.9 Bifidobacteriales Bacteria 2GJ46@201174,4CYQW@85004,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon KDBPDICH_01019 547043.BIFPSEUDO_04431 0.0 1610.1 Bifidobacteriales ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GJTZ@201174,4CZUR@85004,COG0577@1,COG0577@2,COG4591@1,COG4591@2 NA|NA|NA MV MacB-like periplasmic core domain KDBPDICH_01020 547043.BIFPSEUDO_04430 5.1e-142 510.4 Bifidobacteriales ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GJN6@201174,4CZ04@85004,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein KDBPDICH_01021 547043.BIFPSEUDO_04429 8.2e-193 679.5 Bifidobacteriales ko:K03718 ko00000,ko03000 Bacteria 2GP1P@201174,4CZ0V@85004,COG1522@1,COG1522@2 NA|NA|NA K helix_turn_helix ASNC type KDBPDICH_01022 547043.BIFPSEUDO_04428 6.9e-150 536.6 Bifidobacteriales ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 2GM93@201174,4CZXW@85004,COG0619@1,COG0619@2 NA|NA|NA P Cobalt transport protein KDBPDICH_01023 547043.BIFPSEUDO_04427 5.1e-306 1056.2 Bifidobacteriales 3.6.3.24 ko:K02031,ko:K02032,ko:K10824,ko:K15587,ko:K16784,ko:K16786,ko:K16787 ko02010,ko02024,map02010,map02024 M00239,M00440,M00581,M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35,3.A.1.5 Bacteria 2H2BQ@201174,4CZBA@85004,COG1123@1,COG4172@2 NA|NA|NA P AAA domain, putative AbiEii toxin, Type IV TA system KDBPDICH_01024 547043.BIFPSEUDO_04426 4.3e-95 354.0 Bifidobacteriales XK27_01265 ko:K16923,ko:K16924 M00582 ko00000,ko00002,ko02000 3.A.1.28,3.A.1.29 Bacteria 2ICFG@201174,4CZMV@85004,COG4720@1,COG4720@2 NA|NA|NA S ECF-type riboflavin transporter, S component KDBPDICH_01025 547043.BIFPSEUDO_04425 5.9e-252 876.3 Bifidobacteriales metY 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 Bacteria 2I2EB@201174,4CZCT@85004,COG2873@1,COG2873@2 NA|NA|NA E Aminotransferase class-V KDBPDICH_01026 547043.BIFPSEUDO_04423 1.5e-166 592.0 Bifidobacteriales pdxK 2.7.1.35 ko:K00868 ko00750,ko01100,map00750,map01100 R00174,R01909,R02493 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 2HS59@201174,4CYQC@85004,COG2240@1,COG2240@2 NA|NA|NA H Phosphomethylpyrimidine kinase KDBPDICH_01027 547043.BIFPSEUDO_04422 6.2e-84 316.6 Bifidobacteriales yraN ko:K07460 ko00000 Bacteria 2IQ3X@201174,4D191@85004,COG0792@1,COG0792@2 NA|NA|NA L Belongs to the UPF0102 family KDBPDICH_01028 547043.BIFPSEUDO_04421 1e-292 1011.9 Bifidobacteriales comM ko:K07391 ko00000 Bacteria 2GJIQ@201174,4CYUB@85004,COG0606@1,COG0606@2 NA|NA|NA O Magnesium chelatase, subunit ChlI C-terminal KDBPDICH_01029 547043.BIFPSEUDO_04420 2.7e-255 887.5 Bifidobacteriales dprA 5.99.1.2 ko:K03168,ko:K04096 ko00000,ko01000,ko03032,ko03400 Bacteria 2GKDA@201174,4CYVW@85004,COG0758@1,COG0758@2 NA|NA|NA LU DNA recombination-mediator protein A KDBPDICH_01030 547043.BIFPSEUDO_04419 0.0 1249.2 Bifidobacteriales sdhA GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0043436,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071704,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0072350,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_0603,iJN746.PP_4191,iPC815.YPO1111 Bacteria 2GJ45@201174,4CYT5@85004,COG1053@1,COG1053@2 NA|NA|NA C Succinate dehydrogenase flavoprotein subunit KDBPDICH_01031 547043.BIFPSEUDO_04418 5.2e-178 630.2 Bifidobacteriales sdhB GO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0022904,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 e_coli_core.b0724,iAF1260.b0724,iBWG_1329.BWG_0583,iEC042_1314.EC042_0742,iECDH10B_1368.ECDH10B_0791,iECDH1ME8569_1439.ECDH1ME8569_0683,iECUMN_1333.ECUMN_0802,iEcDH1_1363.EcDH1_2911,iJO1366.b0724,iJR904.b0724,iY75_1357.Y75_RS03765 Bacteria 2GP9C@201174,4CZWJ@85004,COG0479@1,COG0479@2 NA|NA|NA C 4Fe-4S dicluster domain KDBPDICH_01032 547043.BIFPSEUDO_04417 4.8e-117 427.2 Bifidobacteriales safC GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 Bacteria 2HXV7@201174,4CZZN@85004,COG4122@1,COG4122@2 NA|NA|NA S O-methyltransferase KDBPDICH_01033 547043.BIFPSEUDO_04416 3.9e-246 857.1 Bifidobacteriales nhaA ko:K03313 ko00000,ko02000 2.A.33.1 Bacteria 2GKIK@201174,4CZES@85004,COG3004@1,COG3004@2 NA|NA|NA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons KDBPDICH_01035 547043.BIFPSEUDO_04411 6.1e-241 839.7 Bifidobacteriales clpX GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 Bacteria 2GJXQ@201174,4CYT6@85004,COG1219@1,COG1219@2 NA|NA|NA O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP KDBPDICH_01036 547043.BIFPSEUDO_04410 8.6e-125 453.0 Bifidobacteriales clpP GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 3.4.21.92 ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Bacteria 2GKNK@201174,4CZVF@85004,COG0740@1,COG0740@2 NA|NA|NA O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins KDBPDICH_01037 1435051.BMOU_2043 1e-113 416.0 Bifidobacteriales clpP 3.4.21.92 ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Bacteria 2GK5C@201174,4CYUU@85004,COG0740@1,COG0740@2 NA|NA|NA O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins KDBPDICH_01038 547043.BIFPSEUDO_04408 0.0 1079.7 Bifidobacteriales ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 2GIUH@201174,4CZFK@85004,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substrate-binding protein, family 5 KDBPDICH_01039 566552.BIFCAT_01892 2.9e-258 897.5 Bifidobacteriales ko:K18926 M00715 ko00000,ko00002,ko02000 2.A.1.3.30 Bacteria 2GIZX@201174,4CZ0R@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_01040 566552.BIFCAT_01891 1.1e-251 875.5 Bifidobacteriales rarA ko:K07478 ko00000 Bacteria 2GKDP@201174,4CZ2K@85004,COG2256@1,COG2256@2 NA|NA|NA L Recombination factor protein RarA KDBPDICH_01041 547043.BIFPSEUDO_04398 0.0 1708.7 Bifidobacteriales ko:K03727 ko00000,ko01000 Bacteria 2GJSV@201174,4CZVX@85004,COG4581@1,COG4581@2 NA|NA|NA L DEAD DEAH box helicase KDBPDICH_01042 547043.BIFPSEUDO_04397 4.3e-191 673.7 Bifidobacteriales 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 2GKRN@201174,4CZZU@85004,COG2326@1,COG2326@2 NA|NA|NA S Polyphosphate kinase 2 (PPK2) KDBPDICH_01043 547043.BIFPSEUDO_04396 1.7e-199 701.8 Bifidobacteriales gluD ko:K02029,ko:K10007 ko02010,map02010 M00233,M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.9 Bacteria 2GNBH@201174,4CZB4@85004,COG0765@1,COG0765@2 NA|NA|NA E Binding-protein-dependent transport system inner membrane component KDBPDICH_01044 547043.BIFPSEUDO_04395 1.8e-111 408.7 Bifidobacteriales gluC GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039 ko:K10006,ko:K10040 ko02010,map02010 M00228,M00233 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.9 Bacteria 2GNUR@201174,4CZ5M@85004,COG0765@1,COG0765@2 NA|NA|NA E Binding-protein-dependent transport system inner membrane component KDBPDICH_01045 547043.BIFPSEUDO_04394 4e-153 547.4 Bifidobacteriales gluB ko:K10005 ko02010,map02010 M00233 ko00000,ko00001,ko00002,ko02000 3.A.1.3.9 Bacteria 2GJH8@201174,4CZA4@85004,COG0834@1,COG0834@2 NA|NA|NA ET Belongs to the bacterial solute-binding protein 3 family KDBPDICH_01046 547043.BIFPSEUDO_04393 6.2e-137 493.4 Bifidobacteriales gluA 3.6.3.21 ko:K02028,ko:K10008 ko02010,map02010 M00233,M00236 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.9 Bacteria 2GIZW@201174,4CYXE@85004,COG1126@1,COG1126@2 NA|NA|NA E ATP-binding protein of ABC transporter for glutamate K02028 KDBPDICH_01047 547043.BIFPSEUDO_04391 6.7e-139 500.0 Bifidobacteriales glnQ 3.6.3.21 ko:K02028,ko:K10038 ko02010,map02010 M00227,M00236 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.2 Bacteria 2GIZW@201174,4CZ3R@85004,COG1126@1,COG1126@2 NA|NA|NA E ATPases associated with a variety of cellular activities KDBPDICH_01048 547043.BIFPSEUDO_04390 7.1e-281 972.6 Bifidobacteriales glnP ko:K02029,ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 2GJJ9@201174,4CZIX@85004,COG0765@1,COG0765@2,COG0834@1,COG0834@2 NA|NA|NA E Binding-protein-dependent transport system inner membrane component KDBPDICH_01049 547043.BIFPSEUDO_04389 0.0 1203.3 Bifidobacteriales aspS GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 2GJHU@201174,4CYWQ@85004,COG0173@1,COG0173@2 NA|NA|NA J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) KDBPDICH_01050 1680.BADO_0588 5.3e-251 873.2 Bifidobacteriales hisS 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GIYJ@201174,4CYR9@85004,COG0124@1,COG0124@2 NA|NA|NA J Histidyl-tRNA synthetase KDBPDICH_01051 547043.BIFPSEUDO_04386 3.3e-216 757.7 Bifidobacteriales 3.1.26.12,3.2.1.8 ko:K01181,ko:K08300,ko:K08301 ko03018,map03018 M00394 ko00000,ko00001,ko00002,ko01000,ko03009,ko03019 Bacteria 2I2EC@201174,4CYYM@85004,COG3266@1,COG3266@2 NA|NA|NA S Domain of Unknown Function (DUF349) KDBPDICH_01052 547043.BIFPSEUDO_04385 4.6e-140 503.8 Bifidobacteriales 3.5.2.10 ko:K01470 ko00330,map00330 R01884 RC00615 ko00000,ko00001,ko01000 Bacteria 2HCRK@201174,4CZW9@85004,COG1402@1,COG1402@2 NA|NA|NA S Creatinine amidohydrolase KDBPDICH_01053 547043.BIFPSEUDO_04384 1.5e-245 855.1 Bifidobacteriales proP ko:K03762 ko00000,ko02000 2.A.1.6.4 Bacteria 2GIYR@201174,4CYY8@85004,COG0477@1,COG0477@2 NA|NA|NA EGP Sugar (and other) transporter KDBPDICH_01054 547043.BIFPSEUDO_04383 4.7e-285 986.5 Bifidobacteriales purR ko:K09684 ko00000,ko03000 Bacteria 2HPPC@201174,4D0FM@85004,COG2508@1,COG2508@2 NA|NA|NA QT Purine catabolism regulatory protein-like family KDBPDICH_01055 547043.BIFPSEUDO_04382 1.5e-255 888.3 Bifidobacteriales codA 3.5.4.1,3.5.4.21 ko:K01485,ko:K03365 ko00240,ko00330,ko01100,map00240,map00330,map01100 R00974,R01411,R02922 RC00074,RC00514,RC00809 ko00000,ko00001,ko01000 Bacteria 2GKKM@201174,4D07T@85004,COG0402@1,COG0402@2 NA|NA|NA F Amidohydrolase family KDBPDICH_01056 547043.BIFPSEUDO_04381 0.0 1595.1 Bifidobacteriales clpC ko:K03696 ko01100,map01100 ko00000,ko03110 Bacteria 2GJ77@201174,4CZCH@85004,COG0542@1,COG0542@2 NA|NA|NA O ATPase family associated with various cellular activities (AAA) KDBPDICH_01057 547043.BIFPSEUDO_04380 4.6e-188 663.7 Bifidobacteriales uspA Bacteria 2IA7S@201174,4CZZ0@85004,COG0589@1,COG0589@2 NA|NA|NA T Belongs to the universal stress protein A family KDBPDICH_01058 547043.BIFPSEUDO_04379 1.2e-182 646.0 Bifidobacteriales Bacteria 28NWB@1,2GJ74@201174,2ZBU7@2,4CYW9@85004 NA|NA|NA S Protein of unknown function (DUF3027) KDBPDICH_01059 547043.BIFPSEUDO_04378 4.5e-67 260.4 Bifidobacteriales cspB ko:K03704 ko00000,ko03000 Bacteria 2IKXN@201174,4D0V4@85004,COG1278@1,COG1278@2 NA|NA|NA K 'Cold-shock' DNA-binding domain KDBPDICH_01060 547043.BIFPSEUDO_04377 0.0 1169.5 Bifidobacteriales 2.7.13.3 ko:K02484,ko:K07653,ko:K07768 ko02020,map02020 M00443,M00460 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 2I2DU@201174,4CZNF@85004,COG3850@1,COG3850@2,COG5002@1,COG5002@2 NA|NA|NA T ATPase histidine kinase DNA gyrase B HSP90 domain protein KDBPDICH_01061 547043.BIFPSEUDO_04376 6.8e-133 479.9 Bifidobacteriales Bacteria 2GIZB@201174,4CYPS@85004,COG0745@1,COG0745@2 NA|NA|NA KT Response regulator receiver domain protein KDBPDICH_01062 547043.BIFPSEUDO_04374 1.3e-124 452.6 Bifidobacteriales Bacteria 2B59T@1,2HZNR@201174,31Y3Y@2,4D12Q@85004 NA|NA|NA KDBPDICH_01064 547043.BIFPSEUDO_04372 8.7e-290 1002.3 Bifidobacteriales groL GO:0001666,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006458,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016020,GO:0016465,GO:0022610,GO:0030112,GO:0030312,GO:0030313,GO:0031975,GO:0032991,GO:0036293,GO:0040007,GO:0042026,GO:0042603,GO:0043388,GO:0044093,GO:0044183,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051082,GO:0051098,GO:0051099,GO:0051101,GO:0051704,GO:0061077,GO:0065007,GO:0065009,GO:0070482,GO:0071944,GO:0101031,GO:1990220,GO:2000677,GO:2000679 ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Bacteria 2GKC9@201174,4CZJK@85004,COG0459@1,COG0459@2 NA|NA|NA O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions KDBPDICH_01065 547043.BIFPSEUDO_02300 8.5e-77 293.5 Bifidobacteriales Bacteria 2DP6P@1,2GQYA@201174,330SA@2,4CZYT@85004 NA|NA|NA S LytR cell envelope-related transcriptional attenuator KDBPDICH_01066 547043.BIFPSEUDO_02301 4.4e-137 493.8 Bifidobacteriales ung GO:0003674,GO:0003824,GO:0004844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Bacteria 2GJ9Z@201174,4CZ3Y@85004,COG0692@1,COG0692@2 NA|NA|NA L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine KDBPDICH_01067 547043.BIFPSEUDO_02302 6.8e-182 643.3 Bifidobacteriales moxR ko:K03924 ko00000,ko01000 Bacteria 2GK07@201174,4CZ2I@85004,COG0714@1,COG0714@2 NA|NA|NA S ATPase family associated with various cellular activities (AAA) KDBPDICH_01068 547043.BIFPSEUDO_02303 5.5e-175 620.2 Bifidobacteriales Bacteria 2GKSJ@201174,4CYYD@85004,COG1721@1,COG1721@2 NA|NA|NA S Protein of unknown function DUF58 KDBPDICH_01069 547043.BIFPSEUDO_02304 1.4e-90 339.0 Bifidobacteriales Bacteria 2AUTC@1,2IKRN@201174,31KGE@2,4D134@85004 NA|NA|NA KDBPDICH_01070 547043.BIFPSEUDO_02305 4.7e-191 673.7 Bifidobacteriales ko:K07114 ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 Bacteria 2I9VM@201174,4CZ00@85004,COG2304@1,COG2304@2 NA|NA|NA S von Willebrand factor (vWF) type A domain KDBPDICH_01071 547043.BIFPSEUDO_02306 1.9e-181 641.7 Bifidobacteriales ko:K07114 ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 Bacteria 2GJMP@201174,4CZ8P@85004,COG2304@1,COG2304@2 NA|NA|NA S von Willebrand factor (vWF) type A domain KDBPDICH_01072 547043.BIFPSEUDO_02307 1.1e-61 243.0 Bifidobacteriales Bacteria 2BG6D@1,2IR67@201174,32A37@2,4D18W@85004 NA|NA|NA KDBPDICH_01073 547043.BIFPSEUDO_02310 3.5e-277 960.3 Bifidobacteriales Bacteria 2IHFB@201174,4CZ17@85004,COG1075@1,COG1075@2 NA|NA|NA S PGAP1-like protein KDBPDICH_01074 547043.BIFPSEUDO_02311 1.1e-278 965.3 Bifidobacteriales purB GO:0003674,GO:0003824,GO:0004018,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 iAF1260.b1131,iBWG_1329.BWG_0979,iE2348C_1286.E2348C_1272,iEC042_1314.EC042_1202,iECABU_c1320.ECABU_c13450,iECDH10B_1368.ECDH10B_1203,iECP_1309.ECP_1126,iECUMN_1333.ECUMN_1375,iETEC_1333.ETEC_1255,iEcHS_1320.EcHS_A1251,iEcolC_1368.EcolC_2472,iJO1366.b1131,iJR904.b1131,iLF82_1304.LF82_1774,iNRG857_1313.NRG857_05460,iY75_1357.Y75_RS05905,ic_1306.c1510 Bacteria 2GM71@201174,4CYV6@85004,COG0015@1,COG0015@2 NA|NA|NA F Adenylosuccinate lyase C-terminal KDBPDICH_01075 547043.BIFPSEUDO_02312 0.0 1524.2 Bifidobacteriales Bacteria 2GMAV@201174,4CYRT@85004,COG0392@1,COG0392@2 NA|NA|NA S Lysylphosphatidylglycerol synthase TM region KDBPDICH_01076 1435051.BMOU_2003 1.4e-41 175.3 Bifidobacteriales hup GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141 ko:K03530 ko00000,ko03032,ko03036,ko03400 Bacteria 2IKQR@201174,4D11V@85004,COG0776@1,COG0776@2 NA|NA|NA L Belongs to the bacterial histone-like protein family KDBPDICH_01077 547043.BIFPSEUDO_02314 1.8e-57 228.4 Bifidobacteriales Bacteria 2AUT3@1,2IKR4@201174,31KG5@2,4D141@85004 NA|NA|NA KDBPDICH_01078 547043.BIFPSEUDO_02315 9.7e-141 506.1 Bifidobacteriales Bacteria 2HHRH@201174,4CZI2@85004,COG1304@1,COG1304@2 NA|NA|NA C FMN binding KDBPDICH_01079 547043.BIFPSEUDO_02316 6.7e-281 972.6 Bifidobacteriales pafA GO:0000166,GO:0000302,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0016020,GO:0016740,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0030312,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034599,GO:0034614,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044464,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070490,GO:0070647,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097159,GO:0097366,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170 6.3.1.19 ko:K13571 M00342 R11207 RC00090,RC00096 ko00000,ko00002,ko01000,ko03051 Bacteria 2GMC6@201174,4CZ12@85004,COG0638@1,COG0638@2 NA|NA|NA O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine KDBPDICH_01080 547043.BIFPSEUDO_02317 1.4e-24 118.2 Bifidobacteriales pup ko:K13570 ko00000,ko04121 Bacteria 2B5FT@1,2GV5R@201174,31YAF@2,4D1NH@85004 NA|NA|NA S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation KDBPDICH_01081 547043.BIFPSEUDO_02318 3.3e-160 570.9 Bifidobacteriales hisN 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 2HGP2@201174,4CYWZ@85004,COG0483@1,COG0483@2 NA|NA|NA G Inositol monophosphatase family KDBPDICH_01082 547043.BIFPSEUDO_02319 1.6e-302 1044.6 Bifidobacteriales dop GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006464,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0016810,GO:0016811,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019941,GO:0030163,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0070490,GO:0070647,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.5.1.119,6.3.1.19 ko:K13571,ko:K20814 M00342 R11207 RC00090,RC00096 ko00000,ko00002,ko01000,ko03051 Bacteria 2GJGI@201174,4CZAN@85004,COG4122@1,COG4122@2 NA|NA|NA S Pup-ligase protein KDBPDICH_01083 547043.BIFPSEUDO_02320 4.4e-283 979.9 Bifidobacteriales arc GO:0000302,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0010499,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0019941,GO:0022623,GO:0022624,GO:0030163,GO:0030312,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042802,GO:0043170,GO:0043335,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0044877,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070628,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097366,GO:0140030,GO:0140035,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902494,GO:1905368,GO:1905369 ko:K13527 ko03050,map03050 M00342 ko00000,ko00001,ko00002,ko03051 Bacteria 2GMR1@201174,4CZ86@85004,COG1222@1,COG1222@2 NA|NA|NA O AAA ATPase forming ring-shaped complexes KDBPDICH_01084 547043.BIFPSEUDO_02321 3.5e-123 447.6 Bifidobacteriales serB 3.1.3.3 ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R00582 RC00017 ko00000,ko00001,ko00002,ko01000,ko01009 Bacteria 2GJDH@201174,4CYWC@85004,COG0560@1,COG0560@2 NA|NA|NA E haloacid dehalogenase-like hydrolase KDBPDICH_01085 547043.BIFPSEUDO_02322 1.1e-178 632.5 Bifidobacteriales fmt GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.1.176,2.1.2.9 ko:K00604,ko:K03500 ko00670,ko00970,map00670,map00970 R03940 RC00026,RC00165 ko00000,ko00001,ko01000,ko03009 iECABU_c1320.ECABU_c37050,iECUMN_1333.ECUMN_3761,ic_1306.c4048 Bacteria 2GKH5@201174,4CZ8C@85004,COG0223@1,COG0223@2 NA|NA|NA J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus KDBPDICH_01086 547043.BIFPSEUDO_02323 2.7e-134 484.6 Bifidobacteriales 3.8.1.2 ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 R05287 RC00697 ko00000,ko00001,ko01000 Bacteria 2I8XE@201174,4CZGV@85004,COG1011@1,COG1011@2 NA|NA|NA S Haloacid dehalogenase-like hydrolase KDBPDICH_01087 547043.BIFPSEUDO_02324 0.0 1468.8 Bifidobacteriales priA GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 2GKES@201174,4D04J@85004,COG1198@1,COG1198@2 NA|NA|NA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA KDBPDICH_01088 547043.BIFPSEUDO_02325 4.2e-228 797.0 Bifidobacteriales metK GO:0000096,GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004478,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006556,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009069,GO:0009108,GO:0009116,GO:0009119,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0019752,GO:0019899,GO:0030312,GO:0030554,GO:0030955,GO:0031420,GO:0032553,GO:0032555,GO:0032559,GO:0033353,GO:0034641,GO:0035375,GO:0035639,GO:0036094,GO:0040007,GO:0042278,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046872,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1901605,GO:1901657 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 iJN678.metX,iJN746.PP_4967,iYL1228.KPN_03375 Bacteria 2GJ4U@201174,4CZ5D@85004,COG0192@1,COG0192@2 NA|NA|NA H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme KDBPDICH_01089 547043.BIFPSEUDO_02326 1.4e-46 191.8 Bifidobacteriales rpoZ GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 2IQHU@201174,4D12C@85004,COG1758@1,COG1758@2 NA|NA|NA K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits KDBPDICH_01090 547043.BIFPSEUDO_02327 0.0 1243.4 Bifidobacteriales ilvD GO:0003674,GO:0003824,GO:0004160,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.9 ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R01209,R04441,R05070 RC00468,RC01714 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1259,iECIAI39_1322.ECIAI39_3015 Bacteria 2GJIJ@201174,4CZ1T@85004,COG0129@1,COG0129@2 NA|NA|NA H Belongs to the IlvD Edd family KDBPDICH_01092 547043.BIFPSEUDO_02330 2.6e-106 391.3 Bifidobacteriales gmk GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8,4.1.1.23 ko:K00942,ko:K01591 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00050,M00051 R00332,R00965,R02090 RC00002,RC00409 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_2813,iIT341.HP0321,iPC815.YPO0040,iSBO_1134.SBO_3729,iSFV_1184.SFV_3881,iSFxv_1172.SFxv_4016,iUTI89_1310.UTI89_C4193 Bacteria 2I2FT@201174,4CYUT@85004,COG0194@1,COG0194@2 NA|NA|NA F Essential for recycling GMP and indirectly, cGMP KDBPDICH_01093 547043.BIFPSEUDO_02331 3.7e-171 607.4 Bifidobacteriales pyrF GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10,4.1.1.23 ko:K01591,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS17585 Bacteria 2GKWK@201174,4D2UX@85004,COG0284@1,COG0284@2 NA|NA|NA F Essential for recycling GMP and indirectly, cGMP KDBPDICH_01094 547043.BIFPSEUDO_02332 0.0 2221.8 Bifidobacteriales carB GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 iAF1260.b0033,iBWG_1329.BWG_0031,iECDH10B_1368.ECDH10B_0034,iECDH1ME8569_1439.ECDH1ME8569_0031,iECUMN_1333.ECUMN_0034,iEcDH1_1363.EcDH1_3566,iJN746.PP_4723,iJO1366.b0033,iJR904.b0033,iPC815.YPO0482,iY75_1357.Y75_RS00170,iYL1228.KPN_00041 Bacteria 2GK5N@201174,4CZJ4@85004,COG0458@1,COG0458@2 NA|NA|NA EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain KDBPDICH_01095 547043.BIFPSEUDO_02333 1.1e-239 835.5 Bifidobacteriales carA GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01955,ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1950,iNJ661.Rv1383,iUTI89_1310.UTI89_C0036,iYO844.BSU15510,ic_1306.c0040 Bacteria 2GKFA@201174,4CYQ1@85004,COG0505@1,COG0505@2 NA|NA|NA F Belongs to the CarA family KDBPDICH_01096 547043.BIFPSEUDO_02334 1.8e-75 288.5 Bifidobacteriales nusB GO:0008150,GO:0040007 ko:K03625 ko00000,ko03009,ko03021 Bacteria 2IM3D@201174,4D0WG@85004,COG0781@1,COG0781@2 NA|NA|NA K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons KDBPDICH_01097 547043.BIFPSEUDO_02335 2e-103 381.7 Bifidobacteriales efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02356 ko00000,ko03012 Bacteria 2GJMS@201174,4CYY6@85004,COG0231@1,COG0231@2 NA|NA|NA J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase KDBPDICH_01098 547043.BIFPSEUDO_02336 9.5e-233 812.4 Bifidobacteriales tuf GO:0001666,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0019899,GO:0030312,GO:0035375,GO:0036293,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 ko:K02358 ko00000,ko03012,ko03029,ko04147 Bacteria 2GK4T@201174,4CYY7@85004,COG0050@1,COG0050@2 NA|NA|NA J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis KDBPDICH_01099 547043.BIFPSEUDO_02338 0.0 1370.9 Bifidobacteriales fusA GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02355 ko00000,ko03012,ko03029 Bacteria 2GKB3@201174,4CYTB@85004,COG0480@1,COG0480@2 NA|NA|NA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome KDBPDICH_01100 1435051.BMOU_1979 3.3e-80 304.3 Bifidobacteriales rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02992 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GMVW@201174,4CZQJ@85004,COG0049@1,COG0049@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA KDBPDICH_01101 1437600.JDUI01000001_gene562 1.2e-61 242.3 Bifidobacteriales rpsL GO:0000372,GO:0000375,GO:0000376,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015935,GO:0016070,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0031323,GO:0031325,GO:0032991,GO:0033120,GO:0034336,GO:0034337,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 ko:K02950 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IHUF@201174,4D0PK@85004,COG0048@1,COG0048@2 NA|NA|NA J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit KDBPDICH_01103 547043.BIFPSEUDO_02342 8.1e-188 662.9 Bifidobacteriales yocS ko:K03453 ko00000 2.A.28 Bacteria 2GMAM@201174,4CZ1K@85004,COG0385@1,COG0385@2 NA|NA|NA S SBF-like CPA transporter family (DUF4137) KDBPDICH_01105 547043.BIFPSEUDO_02344 2.9e-198 697.6 Bifidobacteriales ltaE 4.1.2.48 ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 R00751,R06171 RC00312,RC00372 ko00000,ko00001,ko01000 Bacteria 2GJ0V@201174,4CZ7G@85004,COG2008@1,COG2008@2 NA|NA|NA E Beta-eliminating lyase KDBPDICH_01106 547043.BIFPSEUDO_02345 6.5e-226 789.6 Bifidobacteriales Bacteria 2HEH6@201174,4CZSN@85004,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferase 4-like domain KDBPDICH_01107 547043.BIFPSEUDO_02346 4.2e-231 807.0 Bifidobacteriales purT GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008776,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016741,GO:0016742,GO:0016772,GO:0016774,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.2 ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0389,iSDY_1059.SDY_1135 Bacteria 2GMCS@201174,4CZXH@85004,COG0027@1,COG0027@2 NA|NA|NA F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate KDBPDICH_01108 547043.BIFPSEUDO_02347 4.3e-138 497.3 Bifidobacteriales purC GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016879,GO:0016881,GO:0044424,GO:0044444,GO:0044464 4.1.1.21,4.3.2.2,6.3.2.6 ko:K01587,ko:K01756,ko:K01923 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04209,R04559,R04591 RC00064,RC00162,RC00379,RC00444,RC00445,RC00590 ko00000,ko00001,ko00002,ko01000 iAF1260.b2476,iB21_1397.B21_02330,iBWG_1329.BWG_2240,iE2348C_1286.E2348C_2713,iEC042_1314.EC042_2677,iEC55989_1330.EC55989_2759,iECABU_c1320.ECABU_c27880,iECBD_1354.ECBD_1213,iECB_1328.ECB_02368,iECDH10B_1368.ECDH10B_2642,iECDH1ME8569_1439.ECDH1ME8569_2402,iECDH1ME8569_1439.EcDH1_1193,iECD_1391.ECD_02368,iECED1_1282.ECED1_2911,iECH74115_1262.ECH74115_3698,iECIAI1_1343.ECIAI1_2527,iECNA114_1301.ECNA114_2561,iECO103_1326.ECO103_2988,iECO111_1330.ECO111_3199,iECO26_1355.ECO26_3522,iECOK1_1307.ECOK1_2784,iECP_1309.ECP_2490,iECS88_1305.ECS88_2658,iECSE_1348.ECSE_2760,iECSF_1327.ECSF_2329,iECSP_1301.ECSP_3415,iECUMN_1333.ECUMN_2789,iECW_1372.ECW_m2698,iECs_1301.ECs3338,iEKO11_1354.EKO11_1259,iETEC_1333.ETEC_2581,iEcDH1_1363.EcDH1_1193,iEcE24377_1341.EcE24377A_2757,iEcHS_1320.EcHS_A2607,iEcSMS35_1347.EcSMS35_2623,iEcolC_1368.EcolC_1200,iG2583_1286.G2583_2999,iJN746.PP_1240,iJO1366.b2476,iJR904.b2476,iLF82_1304.LF82_1775,iNRG857_1313.NRG857_12360,iSFV_1184.SFV_2521,iSF_1195.SF2519,iSFxv_1172.SFxv_2773,iS_1188.S2669,iSbBS512_1146.SbBS512_E2848,iUMNK88_1353.UMNK88_3071,iWFL_1372.ECW_m2698,iY75_1357.Y75_RS12925,iYL1228.KPN_02810,iZ_1308.Z3735 Bacteria 2GK3H@201174,4CZGQ@85004,COG0152@1,COG0152@2 NA|NA|NA F Belongs to the SAICAR synthetase family KDBPDICH_01109 547043.BIFPSEUDO_02348 0.0 2469.1 Bifidobacteriales purL 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKG6@201174,4CZ7C@85004,COG0046@1,COG0046@2,COG0047@1,COG0047@2 NA|NA|NA F CobB/CobQ-like glutamine amidotransferase domain KDBPDICH_01110 547043.BIFPSEUDO_02349 1.9e-36 157.9 Bifidobacteriales Bacteria 2DTWH@1,2GUGG@201174,33MZC@2,4D1FM@85004 NA|NA|NA KDBPDICH_01111 547043.BIFPSEUDO_02350 2.3e-311 1074.7 Bifidobacteriales umuC 2.7.7.7 ko:K02346,ko:K03502,ko:K14161 ko00000,ko01000,ko03400 Bacteria 2GQX7@201174,4CZ0D@85004,COG0389@1,COG0389@2 NA|NA|NA L DNA-damage repair protein (DNA polymerase IV) K00961 KDBPDICH_01112 1435051.BMOU_1969 1e-284 985.3 Bifidobacteriales purF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 iSB619.SA_RS05225 Bacteria 2GK6I@201174,4CZ89@85004,COG0034@1,COG0034@2 NA|NA|NA F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine KDBPDICH_01113 547043.BIFPSEUDO_02353 8.3e-185 652.9 Bifidobacteriales purM GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1,6.3.4.13 ko:K01933,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144,R04208 RC00090,RC00166,RC01100 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1844,iECSF_1327.ECSF_2340 Bacteria 2GJNY@201174,4CZ3K@85004,COG0150@1,COG0150@2 NA|NA|NA F Phosphoribosylformylglycinamidine cyclo-ligase KDBPDICH_01114 547043.BIFPSEUDO_02354 2.8e-235 820.8 Bifidobacteriales purD 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS05245,iYO844.BSU06530 Bacteria 2I2F5@201174,4CZ3I@85004,COG0151@1,COG0151@2 NA|NA|NA F Belongs to the GARS family KDBPDICH_01115 547043.BIFPSEUDO_02355 2.1e-247 861.3 Bifidobacteriales Bacteria 2H8UD@201174,4CZ16@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_01116 547043.BIFPSEUDO_02356 1.1e-183 649.0 Bifidobacteriales rihB 3.2.2.1 ko:K01239,ko:K01250 ko00230,ko00760,ko01100,map00230,map00760,map01100 R01245,R01273,R01677,R01770,R02143 RC00033,RC00063,RC00122,RC00318,RC00485 ko00000,ko00001,ko01000 Bacteria 2GP6N@201174,4CZIN@85004,COG1957@1,COG1957@2 NA|NA|NA F Inosine-uridine preferring nucleoside hydrolase KDBPDICH_01117 547043.BIFPSEUDO_02357 2.1e-213 748.0 Bifidobacteriales 1.1.1.1 ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 Bacteria 2I2FD@201174,4D24P@85004,COG1454@1,COG1454@2 NA|NA|NA C Iron-containing alcohol dehydrogenase KDBPDICH_01118 547043.BIFPSEUDO_02358 3.3e-129 467.6 Bifidobacteriales trpF 5.3.1.24 ko:K01817 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03509 RC00945 ko00000,ko00001,ko00002,ko01000 Bacteria 2IHPP@201174,4D17S@85004,COG0135@1,COG0135@2 NA|NA|NA E N-(5'phosphoribosyl)anthranilate (PRA) isomerase KDBPDICH_01119 547043.BIFPSEUDO_02359 9.1e-189 666.0 Bifidobacteriales yeiI GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050225 2.7.1.15,2.7.1.45,2.7.1.83 ko:K00852,ko:K00874,ko:K16328 ko00030,ko00240,ko01100,ko01120,ko01200,map00030,map00240,map01100,map01120,map01200 M00061,M00308,M00631 R01051,R01541,R02750,R03315 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 2HZA1@201174,4CZ7T@85004,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase KDBPDICH_01120 547043.BIFPSEUDO_02360 2.7e-202 711.1 Bifidobacteriales psuK GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050225 2.7.1.15,2.7.1.45,2.7.1.83 ko:K00852,ko:K00874,ko:K16328 ko00030,ko00240,ko01100,ko01120,ko01200,map00030,map00240,map01100,map01120,map01200 M00061,M00308,M00631 R01051,R01541,R02750,R03315 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 2HZA1@201174,4CZ7T@85004,COG0524@1,COG0524@2,COG1522@1,COG1522@2 NA|NA|NA G pfkB family carbohydrate kinase KDBPDICH_01121 547043.BIFPSEUDO_02361 0.0 1362.1 Bifidobacteriales XK27_08315 Bacteria 2HVID@201174,4CZ6J@85004,COG1368@1,COG1368@2 NA|NA|NA M Psort location CytoplasmicMembrane, score 9.26 KDBPDICH_01122 547043.BIFPSEUDO_02362 2.3e-89 334.7 Bifidobacteriales zur GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K02076,ko:K03711,ko:K09823 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria 2IKS3@201174,4D0XG@85004,COG0735@1,COG0735@2 NA|NA|NA P Belongs to the Fur family KDBPDICH_01123 547043.BIFPSEUDO_02363 6.4e-226 789.6 Bifidobacteriales purK 6.3.4.18 ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07404 RC01927 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJCU@201174,4CYWP@85004,COG0026@1,COG0026@2 NA|NA|NA F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) KDBPDICH_01124 547043.BIFPSEUDO_02364 1.1e-84 319.3 Bifidobacteriales purE GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016866,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034023,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 iETEC_1333.ETEC_0575,iJN746.PP_5336,iPC815.YPO3076,iUTI89_1310.UTI89_C0551 Bacteria 2IFFD@201174,4CYQZ@85004,COG0041@1,COG0041@2 NA|NA|NA F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) KDBPDICH_01125 547043.BIFPSEUDO_02365 9.7e-183 646.0 Bifidobacteriales adh3 Bacteria 2GMHR@201174,4D00X@85004,COG0604@1,COG0604@2 NA|NA|NA C Zinc-binding dehydrogenase KDBPDICH_01126 547043.BIFPSEUDO_02366 0.0 1243.0 Bifidobacteriales dxs GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0008661,GO:0009058,GO:0009240,GO:0009987,GO:0016740,GO:0016744,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0019842,GO:0030145,GO:0030975,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901363,GO:1901576,GO:1901681 2.2.1.7 ko:K01662 ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130 M00096 R05636 RC00032 ko00000,ko00001,ko00002,ko01000 Bacteria 2GMFA@201174,4CZ2M@85004,COG1154@1,COG1154@2 NA|NA|NA H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) KDBPDICH_01127 566552.BIFCAT_01798 2.9e-255 887.5 Bifidobacteriales macB_8 ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GIRW@201174,4CZMQ@85004,COG0577@1,COG0577@2 NA|NA|NA V MacB-like periplasmic core domain KDBPDICH_01128 547043.BIFPSEUDO_02368 4.4e-147 527.7 Bifidobacteriales Bacteria 2GP6I@201174,4D013@85004,COG1361@1,COG1361@2 NA|NA|NA M Conserved repeat domain KDBPDICH_01129 547043.BIFPSEUDO_02369 9.6e-135 486.1 Bifidobacteriales ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GJN6@201174,4D2SJ@85004,COG1136@1,COG1136@2 NA|NA|NA V ATPases associated with a variety of cellular activities KDBPDICH_01130 547043.BIFPSEUDO_02370 7.4e-75 286.6 Bifidobacteriales Bacteria 2AU97@1,2IJXF@201174,31JWK@2,4D0W5@85004 NA|NA|NA KDBPDICH_01131 78345.BMERY_1643 1.7e-13 81.6 Bifidobacteriales ko:K07133 ko00000 Bacteria 2HJ52@201174,4D2TQ@85004,COG1373@1,COG1373@2 NA|NA|NA S Domain of unknown function (DUF4143) KDBPDICH_01132 547043.BIFPSEUDO_02371 3.1e-127 461.5 Bifidobacteriales XK27_08050 Bacteria 2GJ1U@201174,4CYTU@85004,COG0330@1,COG0330@2 NA|NA|NA O prohibitin homologues KDBPDICH_01133 547043.BIFPSEUDO_02373 1.4e-43 181.8 Bifidobacteriales XAC3035 ko:K06191 ko00000 Bacteria 2HZQB@201174,4D18H@85004,COG0695@1,COG0695@2 NA|NA|NA O Glutaredoxin KDBPDICH_01134 547043.BIFPSEUDO_02374 2.8e-15 86.7 Bifidobacteriales ko:K02031,ko:K02032 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2H8A5@201174,4D2HM@85004,COG1123@1,COG4172@2 NA|NA|NA P Belongs to the ABC transporter superfamily KDBPDICH_01135 547043.BIFPSEUDO_02375 1.2e-74 285.8 Bifidobacteriales metC 2.5.1.48,4.4.1.8 ko:K01739,ko:K01760 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04941,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00382,RC00420,RC00488,RC00710,RC01245,RC02303,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ5S@201174,4CZKK@85004,COG0626@1,COG0626@2 NA|NA|NA E Cys/Met metabolism PLP-dependent enzyme KDBPDICH_01136 547043.BIFPSEUDO_02377 1.7e-221 775.0 Bifidobacteriales mtnE GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009987,GO:0016740,GO:0016769,GO:0016999,GO:0017000,GO:0017144,GO:0044237,GO:0044249 2.6.1.83 ko:K08969,ko:K10206,ko:K19549 ko00270,ko00300,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map01100,map01110,map01130,map01230 M00034,M00527,M00787 R07396,R07613,R11068 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 2GJ7R@201174,4CZCF@85004,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase class I and II KDBPDICH_01137 547043.BIFPSEUDO_02378 4.9e-98 364.0 Bifidobacteriales metI ko:K02072 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 2GY65@201174,4CZP5@85004,COG2011@1,COG2011@2 NA|NA|NA P Psort location CytoplasmicMembrane, score 9.99 KDBPDICH_01138 547043.BIFPSEUDO_02379 1e-193 682.6 Bifidobacteriales metN ko:K02071 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 2GJ9P@201174,4CZYI@85004,COG1135@1,COG1135@2 NA|NA|NA P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system KDBPDICH_01139 547043.BIFPSEUDO_02380 2.8e-157 561.2 Bifidobacteriales metQ ko:K02073 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 2GMNI@201174,4CZAI@85004,COG1464@1,COG1464@2 NA|NA|NA M NLPA lipoprotein KDBPDICH_01140 547043.BIFPSEUDO_02381 1.4e-200 705.3 Bifidobacteriales panE1 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 Bacteria 2HZCX@201174,4CZN4@85004,COG1893@1,COG1893@2 NA|NA|NA H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid KDBPDICH_01141 547043.BIFPSEUDO_02383 6.9e-143 513.5 Bifidobacteriales cjaA ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 2GJH8@201174,4CZAC@85004,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial periplasmic substrate-binding proteins KDBPDICH_01142 547043.BIFPSEUDO_02384 1.5e-152 545.4 Bifidobacteriales glnQ 3.6.3.21 ko:K02028 M00236 ko00000,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 2H1ZM@201174,4CZTK@85004,COG1126@1,COG1126@2 NA|NA|NA E ATP binding protein of ABC transporter for glutamate aspartate K02028 KDBPDICH_01143 547043.BIFPSEUDO_02385 3.6e-120 437.6 Bifidobacteriales ko:K02029,ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 2GN44@201174,4CZG7@85004,COG0765@1,COG0765@2 NA|NA|NA E Binding-protein-dependent transport system inner membrane component KDBPDICH_01144 547043.BIFPSEUDO_02386 1.8e-108 398.7 Bifidobacteriales papP ko:K02029 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 2GM0I@201174,4CZ8E@85004,COG0765@1,COG0765@2 NA|NA|NA E Binding-protein-dependent transport system inner membrane component KDBPDICH_01145 547043.BIFPSEUDO_02388 2.7e-114 417.9 Bifidobacteriales ko:K03830 ko00000,ko01000 Bacteria 2IB9K@201174,4D0M3@85004,COG0454@1,COG0456@2 NA|NA|NA K acetyltransferase KDBPDICH_01146 78346.BRUM_0079 5.3e-29 132.9 Bifidobacteriales insK GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 ko:K07497 ko00000 Bacteria 2H928@201174,4CZCP@85004,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain KDBPDICH_01147 547043.BIFPSEUDO_03625 3.3e-63 247.7 Bifidobacteriales Bacteria 2A3Y6@1,2IM76@201174,30SGI@2,4D10Z@85004 NA|NA|NA KDBPDICH_01148 566552.BIFCAT_00825 3.3e-96 357.8 Bifidobacteriales Bacteria 2IQ64@201174,4D199@85004,COG0739@1,COG0739@2 NA|NA|NA M Peptidase family M23 KDBPDICH_01149 547043.BIFPSEUDO_03627 0.0 1199.1 Bifidobacteriales fadD1 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 Bacteria 2GIXQ@201174,4CYYC@85004,COG1022@1,COG1022@2 NA|NA|NA I AMP-binding enzyme KDBPDICH_01150 547043.BIFPSEUDO_03628 1.1e-268 932.2 Bifidobacteriales ko:K10439,ko:K10546 ko02010,ko02030,map02010,map02030 M00212,M00216 ko00000,ko00001,ko00002,ko02000 3.A.1.2.1,3.A.1.2.13,3.A.1.2.19,3.A.1.2.5 Bacteria 2HZAK@201174,4CZCR@85004,COG4213@1,COG4213@2 NA|NA|NA G ABC transporter substrate-binding protein KDBPDICH_01151 547043.BIFPSEUDO_03629 5.3e-231 806.6 Bifidobacteriales icd GO:0000287,GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006102,GO:0008150,GO:0008152,GO:0008270,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044464,GO:0045333,GO:0046487,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:0071944,GO:0072350 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 2GM3D@201174,4CZ8V@85004,COG0538@1,COG0538@2 NA|NA|NA C Belongs to the isocitrate and isopropylmalate dehydrogenases family KDBPDICH_01152 547043.BIFPSEUDO_03630 8.1e-210 736.1 Bifidobacteriales guaB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GKVS@201174,4CZDK@85004,COG0516@1,COG0516@2 NA|NA|NA F IMP dehydrogenase family protein KDBPDICH_01153 547043.BIFPSEUDO_03631 6.1e-108 396.7 Bifidobacteriales dnaQ 2.7.7.7 ko:K02342,ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 2I2FU@201174,4D10C@85004,COG2176@1,COG2176@2 NA|NA|NA L Exonuclease, DNA polymerase III, epsilon subunit family KDBPDICH_01154 547043.BIFPSEUDO_03634 9e-72 276.2 Bifidobacteriales ko:K06956 ko00000 Bacteria 2I862@201174,4D08P@85004,COG1823@1,COG1823@2 NA|NA|NA U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family KDBPDICH_01155 547043.BIFPSEUDO_03635 2.6e-242 844.3 Bifidobacteriales glmU GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0019134,GO:0022610,GO:0030203,GO:0030260,GO:0033692,GO:0034637,GO:0034645,GO:0035635,GO:0040007,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044650,GO:0046872,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 ko:K04042,ko:K11528,ko:K16203 ko00520,ko01100,ko01130,map00520,map01100,map01130 M00362 R00416,R05332 RC00002,RC00004,RC00166 ko00000,ko00001,ko00002,ko01000,ko01002 3.A.1.5.2 iJN678.glmU,iLJ478.TM1629 Bacteria 2GJS1@201174,4CZ4C@85004,COG1207@1,COG1207@2 NA|NA|NA M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain KDBPDICH_01156 547043.BIFPSEUDO_03636 3.6e-67 260.8 Bifidobacteriales rsfS GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 2.7.7.18 ko:K00969,ko:K09710 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000,ko03009 Bacteria 2IKZ3@201174,4D11U@85004,COG0799@1,COG0799@2 NA|NA|NA J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation KDBPDICH_01157 547043.BIFPSEUDO_03637 9.5e-143 512.7 Bifidobacteriales 3.1.3.85,5.4.2.11,5.4.2.12 ko:K01834,ko:K15634,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 2GJYU@201174,4CYXK@85004,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family KDBPDICH_01158 547043.BIFPSEUDO_03638 2.1e-117 429.1 Bifidobacteriales Bacteria 2DQFC@1,2I8B6@201174,336HV@2,4D309@85004 NA|NA|NA KDBPDICH_01160 547043.BIFPSEUDO_03641 1.3e-232 812.0 Bifidobacteriales XK27_00240 Bacteria 2HZGJ@201174,4D0D3@85004,COG1510@1,COG1510@2,COG3177@1,COG3177@2 NA|NA|NA K Fic/DOC family KDBPDICH_01161 547043.BIFPSEUDO_03644 2.7e-70 271.2 Bifidobacteriales pdxH ko:K07006 ko00000 Bacteria 2IJK2@201174,4D0W8@85004,COG3576@1,COG3576@2 NA|NA|NA S Pfam:Pyridox_oxidase KDBPDICH_01162 547043.BIFPSEUDO_03646 2.7e-302 1043.9 Bifidobacteriales Bacteria 2HVUZ@201174,4CZTB@85004,COG4932@1,COG4932@2 NA|NA|NA M domain protein KDBPDICH_01163 547043.BIFPSEUDO_03647 5.6e-83 313.5 Bifidobacteriales 3.4.22.70 ko:K07284 ko00000,ko01000,ko01002,ko01011 Bacteria 2GNWT@201174,4D223@85004,COG3764@1,COG3764@2 NA|NA|NA M Sortase family KDBPDICH_01164 547043.BIFPSEUDO_03647 5.2e-65 253.4 Bifidobacteriales 3.4.22.70 ko:K07284 ko00000,ko01000,ko01002,ko01011 Bacteria 2GNWT@201174,4D223@85004,COG3764@1,COG3764@2 NA|NA|NA M Sortase family KDBPDICH_01165 547043.BIFPSEUDO_03648 1.5e-163 582.0 Bifidobacteriales 3.1.3.85,5.4.2.11,5.4.2.12 ko:K01834,ko:K15634,ko:K22306 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 2GJYU@201174,4CZI8@85004,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family KDBPDICH_01166 547043.BIFPSEUDO_03649 5.7e-172 610.1 Bifidobacteriales corA ko:K03284 ko00000,ko02000 1.A.35.1,1.A.35.3 Bacteria 2HZ8V@201174,4CYWX@85004,COG0598@1,COG0598@2 NA|NA|NA P CorA-like Mg2+ transporter protein KDBPDICH_01167 566552.BIFCAT_00803 1.5e-142 512.3 Bifidobacteriales ko:K10005 ko02010,map02010 M00233 ko00000,ko00001,ko00002,ko02000 3.A.1.3.9 Bacteria 2I9PU@201174,4D09U@85004,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial periplasmic substrate-binding proteins KDBPDICH_01168 547043.BIFPSEUDO_03651 0.0 2060.4 Bifidobacteriales leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 2GJI1@201174,4CZHV@85004,COG0495@1,COG0495@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family KDBPDICH_01169 547043.BIFPSEUDO_03652 1.3e-92 346.3 Bifidobacteriales comEA 2.4.1.21 ko:K00703,ko:K02237,ko:K02238 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00429,M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003,ko02044 3.A.11.1,3.A.11.2 GT5 Bacteria 2IQDC@201174,4D176@85004,COG1555@1,COG1555@2 NA|NA|NA L Helix-hairpin-helix motif KDBPDICH_01170 547043.BIFPSEUDO_03653 0.0 1122.1 Bifidobacteriales comE ko:K02238 M00429 ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 Bacteria 2GJGR@201174,4CZ6X@85004,COG0658@1,COG0658@2 NA|NA|NA S Competence protein KDBPDICH_01171 547043.BIFPSEUDO_03654 6.5e-179 633.3 Bifidobacteriales holA 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 2GNMZ@201174,4CZ07@85004,COG1466@1,COG1466@2 NA|NA|NA L DNA polymerase III delta subunit KDBPDICH_01172 566552.BIFCAT_00798 9.2e-94 349.7 Bifidobacteriales ydiB GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.7.1.221,5.1.1.1 ko:K01775,ko:K06925,ko:K07102 ko00473,ko00520,ko01100,ko01502,map00473,map00520,map01100,map01502 R00401,R08968,R11024 RC00002,RC00078,RC00285 ko00000,ko00001,ko01000,ko01011,ko03016 Bacteria 2IKV2@201174,4D0PH@85004,COG0802@1,COG0802@2 NA|NA|NA S Threonylcarbamoyl adenosine biosynthesis protein TsaE KDBPDICH_01173 547043.BIFPSEUDO_03657 6.4e-148 530.0 Bifidobacteriales yeaZ GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0071944,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K14742 R10648 RC00070,RC00416 ko00000,ko01000,ko03016 Bacteria 2GMTM@201174,4D0A2@85004,COG1214@1,COG1214@2 NA|NA|NA O Glycoprotease family KDBPDICH_01174 547043.BIFPSEUDO_03658 7.6e-103 379.8 Bifidobacteriales rimI GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008999,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017189,GO:0018193,GO:0018194,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.3.1.128,2.3.1.234 ko:K01409,ko:K03789,ko:K14742 R10648 RC00070,RC00416 ko00000,ko01000,ko03009,ko03016 Bacteria 2IM9R@201174,4D0Q0@85004,COG0454@1,COG0456@2 NA|NA|NA K FR47-like protein KDBPDICH_01175 547043.BIFPSEUDO_03659 3.1e-195 687.6 Bifidobacteriales tsaD GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 R10648 RC00070,RC00416 ko00000,ko00001,ko00002,ko01000,ko02044,ko03016 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 2GJ98@201174,4CZ0K@85004,COG0533@1,COG0533@2 NA|NA|NA O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction KDBPDICH_01177 657322.FPR_07630 2.1e-119 435.3 Ruminococcaceae yoaP Bacteria 1TRN6@1239,2484V@186801,3WGHV@541000,COG1246@1,COG1246@2 NA|NA|NA E YoaP-like KDBPDICH_01178 547043.BIFPSEUDO_03662 4.5e-185 653.7 Bifidobacteriales cbh 3.5.1.24 ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 R02797,R03975,R03977,R04486,R04487,R05835 RC00090,RC00096 ko00000,ko00001,ko01000 Bacteria 2GK9Z@201174,4CZNU@85004,COG3049@1,COG3049@2 NA|NA|NA M Linear amide C-N hydrolase, choloylglycine hydrolase family protein KDBPDICH_01179 547043.BIFPSEUDO_03663 5.3e-119 433.7 Bifidobacteriales ykoE ko:K16925 M00582 ko00000,ko00002,ko02000 3.A.1.30 Bacteria 2H5VZ@201174,4CZ6M@85004,COG4721@1,COG4721@2 NA|NA|NA S ABC-type cobalt transport system, permease component KDBPDICH_01180 547043.BIFPSEUDO_03666 6.7e-72 276.6 Bifidobacteriales Bacteria 2HZK3@201174,4D0RM@85004,COG0789@1,COG0789@2 NA|NA|NA K MerR family regulatory protein KDBPDICH_01181 547043.BIFPSEUDO_03667 4.6e-199 700.3 Bifidobacteriales adhB 1.1.1.1,1.1.1.14 ko:K00001,ko:K00008 ko00010,ko00040,ko00051,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00040,map00051,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 M00014 R00623,R00754,R00875,R01896,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00085,RC00087,RC00088,RC00099,RC00102,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko00002,ko01000 Bacteria 2GISW@201174,4CZJY@85004,COG1063@1,COG1063@2 NA|NA|NA C Zinc-binding dehydrogenase KDBPDICH_01182 547043.BIFPSEUDO_03668 2.4e-144 518.1 Bifidobacteriales 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 R03470 RC00938 ko00000,ko00001,ko01000 Bacteria 2GITB@201174,4CZBK@85004,COG0599@1,COG0599@2 NA|NA|NA S Carboxymuconolactone decarboxylase family KDBPDICH_01183 547043.BIFPSEUDO_03669 2.7e-221 774.2 Bifidobacteriales yxjG_1 Bacteria 2I9RI@201174,4CZKN@85004,COG0620@1,COG0620@2 NA|NA|NA E Psort location Cytoplasmic, score 8.87 KDBPDICH_01184 547043.BIFPSEUDO_03670 2.9e-54 217.6 Bifidobacteriales Bacteria 2II4Y@201174,4D0YG@85004,COG2246@1,COG2246@2 NA|NA|NA S Psort location CytoplasmicMembrane, score KDBPDICH_01185 547043.BIFPSEUDO_03671 3.5e-183 647.5 Bifidobacteriales cat Bacteria 2GKSG@201174,4D05T@85004,COG0053@1,COG0053@2 NA|NA|NA P Cation efflux family KDBPDICH_01188 547043.BIFPSEUDO_03674 4.8e-112 411.0 Bifidobacteriales ko:K03646 ko00000,ko02000 2.C.1.2 Bacteria 2DDMI@1,2ICIR@201174,2ZIJN@2,4D112@85004 NA|NA|NA KDBPDICH_01189 547043.BIFPSEUDO_03675 1e-146 526.2 Bifidobacteriales Bacteria 2BAGB@1,2H8N0@201174,323WV@2,4D2EW@85004 NA|NA|NA KDBPDICH_01190 547043.BIFPSEUDO_03676 2e-143 515.0 Bifidobacteriales mazG GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0022607,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0035539,GO:0042454,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044464,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0047693,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.66 ko:K02428 ko00230,map00230 R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 Bacteria 2GNKC@201174,4CZ9U@85004,COG1694@1,COG3956@2 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_01191 547043.BIFPSEUDO_03678 1.8e-278 964.5 Bifidobacteriales pepC GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.4.22.40 ko:K01372 ko00000,ko01000,ko01002 Bacteria 2HCVR@201174,4CZD8@85004,COG3579@1,COG3579@2 NA|NA|NA E Peptidase C1-like family KDBPDICH_01192 547043.BIFPSEUDO_03679 1.3e-179 635.6 Bifidobacteriales ko:K02806 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 Bacteria 2HZMJ@201174,4D0Y3@85004,COG0517@1,COG0517@2 NA|NA|NA S IMP dehydrogenase activity KDBPDICH_01194 547043.BIFPSEUDO_03680 1.3e-298 1031.6 Bifidobacteriales ybiT Bacteria 2GKQ4@201174,4CYS2@85004,COG0488@1,COG0488@2 NA|NA|NA S ABC transporter KDBPDICH_01195 547043.BIFPSEUDO_03681 2e-109 401.7 Bifidobacteriales pncA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008936,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0018130,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.11.1,3.5.1.19 ko:K08281,ko:K12132 ko00760,ko01100,map00760,map01100 R01268 RC00100 ko00000,ko00001,ko01000,ko01001 iE2348C_1286.E2348C_1895,iECs_1301.ECs2475,iZ_1308.Z2802 Bacteria 2IFQW@201174,4CYTT@85004,COG1335@1,COG1335@2 NA|NA|NA Q Isochorismatase family KDBPDICH_01196 547043.BIFPSEUDO_03682 2.8e-66 257.7 Bifidobacteriales ogt 2.1.1.63 ko:K00567,ko:K07443,ko:K07452 ko00000,ko01000,ko02048,ko03400 Bacteria 2IHXW@201174,4D10F@85004,COG0350@1,COG0350@2 NA|NA|NA L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated KDBPDICH_01198 547043.BIFPSEUDO_03685 2e-13 80.5 Bifidobacteriales Bacteria 2B5HZ@1,2H0JJ@201174,31YCP@2,4D1QQ@85004 NA|NA|NA KDBPDICH_01199 547043.BIFPSEUDO_03686 6.4e-272 943.0 Bifidobacteriales Bacteria 2ETEZ@1,2HXGA@201174,33KYW@2,4CZSC@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_01200 547043.BIFPSEUDO_03687 6.2e-124 450.3 Bifidobacteriales Bacteria 2APK1@1,2IEAB@201174,31EP8@2,4D0C3@85004 NA|NA|NA S Domain of unknown function (DUF4194) KDBPDICH_01201 78346.BRUM_1116 0.0 1698.3 Bifidobacteriales Bacteria 2GMIP@201174,4CYWR@85004,COG4913@1,COG4913@2 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_01202 547043.BIFPSEUDO_03690 0.0 1974.5 Bifidobacteriales uvrA GO:0000018,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031324,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0045910,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0071944,GO:0080090 ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 2GJUV@201174,4CYRU@85004,COG0178@1,COG0178@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate KDBPDICH_01203 566552.BIFCAT_00764 0.0 1378.2 Bifidobacteriales uvrC GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016787,GO:0016788,GO:0030312,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1902494,GO:1905347,GO:1905348,GO:1990391 ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 2GIS4@201174,4CYVX@85004,COG0322@1,COG0322@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision KDBPDICH_01204 566552.BIFCAT_00763 1.5e-180 638.6 Bifidobacteriales aroE GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv2552c Bacteria 2GPQQ@201174,4CZCM@85004,COG0169@1,COG0169@2 NA|NA|NA E Shikimate dehydrogenase substrate binding domain KDBPDICH_01205 566552.BIFCAT_00762 2.8e-168 597.8 Bifidobacteriales rapZ GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K06958 ko00000,ko03019 Bacteria 2GMWB@201174,4CZ70@85004,COG1660@1,COG1660@2 NA|NA|NA S Displays ATPase and GTPase activities KDBPDICH_01206 566552.BIFCAT_00761 4.4e-172 610.5 Bifidobacteriales whiA GO:0008150,GO:0043937,GO:0050789,GO:0050793,GO:0065007 ko:K09762 ko00000 Bacteria 2GJZU@201174,4CYTD@85004,COG1481@1,COG1481@2 NA|NA|NA K May be required for sporulation KDBPDICH_01207 566552.BIFCAT_00760 2.1e-219 768.1 Bifidobacteriales pgk GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3,5.3.1.1 ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01015,R01512 RC00002,RC00043,RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GJC6@201174,4CZJ3@85004,COG0126@1,COG0126@2 NA|NA|NA F Phosphoglycerate kinase KDBPDICH_01208 566552.BIFCAT_00759 5.3e-147 526.9 Bifidobacteriales tpiA GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 2.7.2.3,5.3.1.1 ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01015,R01512 RC00002,RC00043,RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GJXZ@201174,4CYSG@85004,COG0149@1,COG0149@2 NA|NA|NA G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) KDBPDICH_01209 1435051.BMOU_1040 1.8e-32 144.8 Bifidobacteriales secG GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 2GR31@201174,4D16U@85004,COG1314@1,COG1314@2 NA|NA|NA U Preprotein translocase SecG subunit KDBPDICH_01210 566552.BIFCAT_00757 3.3e-163 580.9 Bifidobacteriales Bacteria 2HZYB@201174,4CZQW@85004,COG0561@1,COG0561@2 NA|NA|NA S Sucrose-6F-phosphate phosphohydrolase KDBPDICH_01211 566552.BIFCAT_00756 4.4e-299 1033.1 Bifidobacteriales alaA GO:0003674,GO:0003824,GO:0004021,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0019842,GO:0030170,GO:0030632,GO:0032787,GO:0033554,GO:0036094,GO:0040007,GO:0042221,GO:0042851,GO:0042852,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0046677,GO:0047635,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0070279,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.2,2.6.1.66 ko:K00814,ko:K14260 ko00220,ko00250,ko00290,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00220,map00250,map00290,map00710,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00171 R00258,R01215 RC00006,RC00008,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 iNJ661.Rv0337c Bacteria 2GJ7R@201174,4CZVJ@85004,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase, class I II KDBPDICH_01212 566552.BIFCAT_00755 4.2e-203 713.8 Bifidobacteriales tal GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016829,GO:0016830,GO:0016832,GO:0044424,GO:0044464,GO:0097023 2.2.1.2 ko:K00616,ko:K08313,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 iB21_1397.B21_03781,iEC042_1314.EC042_0914,iECBD_1354.ECBD_4077,iECB_1328.ECB_03832,iECD_1391.ECD_03832,iECH74115_1262.ECH74115_5407,iECSP_1301.ECSP_5016,iECs_1301.ECs4875,iEcHS_1320.EcHS_A4181,iG2583_1286.G2583_4758,iSBO_1134.SBO_0715,iSF_1195.SF0775,iSFxv_1172.SFxv_0845,iS_1188.S0818,iZ_1308.Z5501 Bacteria 2GMF9@201174,4CZ3J@85004,COG0176@1,COG0176@2 NA|NA|NA H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway KDBPDICH_01213 566552.BIFCAT_00754 0.0 1416.7 Bifidobacteriales tkt GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ1K@201174,4CZ64@85004,COG0021@1,COG0021@2 NA|NA|NA H Belongs to the transketolase family KDBPDICH_01214 566552.BIFCAT_00752 5.2e-196 690.3 Bifidobacteriales hrcA GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K03705 ko00000,ko03000 Bacteria 2GKF5@201174,4CZK3@85004,COG1420@1,COG1420@2 NA|NA|NA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons KDBPDICH_01215 566552.BIFCAT_00751 3.1e-188 664.5 Bifidobacteriales dnaJ GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044464,GO:0071944 ko:K03686 ko00000,ko03029,ko03110 Bacteria 2GK69@201174,4D03K@85004,COG0484@1,COG0484@2 NA|NA|NA O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins KDBPDICH_01216 566552.BIFCAT_00750 2.1e-159 568.2 Bifidobacteriales Bacteria 2GW7W@201174,4CZ4W@85004,COG3001@1,COG3001@2 NA|NA|NA G Fructosamine kinase KDBPDICH_01217 566552.BIFCAT_00749 2.6e-155 554.7 Bifidobacteriales uppP 3.6.1.27 ko:K06153 ko00550,map00550 R05627 RC00002 ko00000,ko00001,ko01000,ko01011 Bacteria 2GJVG@201174,4CZ83@85004,COG1968@1,COG1968@2 NA|NA|NA V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin KDBPDICH_01218 566552.BIFCAT_00748 1.6e-125 455.3 Bifidobacteriales ko:K07184 ko00000 Bacteria 2GK10@201174,4CYSJ@85004,COG1938@1,COG1938@2 NA|NA|NA S PAC2 family KDBPDICH_01221 702459.BBPR_0984 1.8e-89 335.1 Bifidobacteriales Bacteria 2IGPZ@201174,4D0N7@85004,COG1476@1,COG1476@2 NA|NA|NA K Putative zinc ribbon domain KDBPDICH_01222 702459.BBPR_0985 2.6e-123 448.0 Bifidobacteriales Bacteria 2GN4K@201174,4D08M@85004,COG4832@1,COG4832@2 NA|NA|NA S GyrI-like small molecule binding domain KDBPDICH_01223 702459.BBPR_0986 1e-27 128.6 Bacteria Bacteria COG0582@1,COG0582@2 NA|NA|NA L DNA integration KDBPDICH_01224 566552.BIFCAT_00746 8.7e-60 236.1 Bifidobacteriales Bacteria 29TZI@1,2ISJH@201174,30F8H@2,4D0Z6@85004 NA|NA|NA KDBPDICH_01225 566552.BIFCAT_00745 1.6e-111 408.7 Bifidobacteriales Bacteria 2GM67@201174,4CZ0X@85004,COG0789@1,COG0789@2 NA|NA|NA K helix_turn_helix, mercury resistance KDBPDICH_01226 566552.BIFCAT_00744 1.6e-76 292.0 Bifidobacteriales garA Bacteria 2GK99@201174,4D0R3@85004,COG1716@1,COG1716@2 NA|NA|NA T Inner membrane component of T3SS, cytoplasmic domain KDBPDICH_01227 547043.BIFPSEUDO_03719 3.1e-32 144.1 Bifidobacteriales Bacteria 2B2IQ@1,2GUXU@201174,31V3U@2,4D1EY@85004 NA|NA|NA KDBPDICH_01228 566552.BIFCAT_00742 8.8e-15 85.1 Bifidobacteriales Bacteria 2B5FP@1,2H0FZ@201174,31YAB@2,4D1P0@85004 NA|NA|NA KDBPDICH_01234 566552.BIFCAT_00737 1.1e-140 505.8 Bifidobacteriales pgp GO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046777,GO:0071704,GO:0140096,GO:1901564 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 2HFGX@201174,4CYSF@85004,COG0546@1,COG0546@2 NA|NA|NA S HAD-hyrolase-like KDBPDICH_01235 566552.BIFCAT_00736 8.7e-62 242.7 Bifidobacteriales rbpA GO:0001000,GO:0001098,GO:0001108,GO:0003674,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0008270,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0043167,GO:0043169,GO:0043175,GO:0045893,GO:0045935,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070063,GO:0080090,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 Bacteria 2CNY9@1,2IMK6@201174,32SI2@2,4D0V5@85004 NA|NA|NA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters KDBPDICH_01236 566552.BIFCAT_00735 0.0 1695.6 Bifidobacteriales helY GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0030312,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360,GO:1901361,GO:1901575 ko:K03727 ko00000,ko01000 Bacteria 2GJEX@201174,4CZEC@85004,COG4581@1,COG4581@2 NA|NA|NA L DEAD DEAH box helicase KDBPDICH_01237 566552.BIFCAT_00734 4.7e-54 216.9 Bifidobacteriales Bacteria 2B5BE@1,2IQT5@201174,31Y5K@2,4D17A@85004 NA|NA|NA KDBPDICH_01238 566552.BIFCAT_00733 0.0 1231.5 Bifidobacteriales pafB ko:K13573 ko00000,ko03051 Bacteria 2I8M5@201174,4CZWF@85004,COG2378@1,COG2378@2 NA|NA|NA K WYL domain KDBPDICH_01239 566552.BIFCAT_00732 1.1e-286 991.9 Bifidobacteriales ugpA 2.7.7.9 ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 M00129,M00361,M00362,M00549 R00289 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 2I2G3@201174,4CYTQ@85004,COG4284@1,COG4284@2 NA|NA|NA G UTP-glucose-1-phosphate uridylyltransferase KDBPDICH_01241 566552.BIFCAT_00730 1.9e-71 275.0 Bifidobacteriales Bacteria 2AXTZ@1,2IMJI@201174,31PV0@2,4D12E@85004 NA|NA|NA KDBPDICH_01242 566552.BIFCAT_00729 0.0 1372.1 Bifidobacteriales der GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0030312,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0040007,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.1.1.399,1.1.1.95,2.7.4.25 ko:K00058,ko:K00945,ko:K03977 ko00240,ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00240,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020,M00052 R00158,R00512,R01513,R01665 RC00002,RC00031 ko00000,ko00001,ko00002,ko01000,ko03009,ko04147 Bacteria 2GJ8J@201174,4CYSE@85004,COG0283@1,COG0283@2,COG1160@1,COG1160@2 NA|NA|NA F GTPase that plays an essential role in the late steps of ribosome biogenesis KDBPDICH_01243 547043.BIFPSEUDO_03733 2e-143 515.0 Bifidobacteriales rluB GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.22 ko:K06178,ko:K06183 ko00000,ko01000,ko03009 Bacteria 2GJ4N@201174,4CZGG@85004,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family KDBPDICH_01244 547043.BIFPSEUDO_03734 6.4e-160 570.1 Bifidobacteriales glpF ko:K02440,ko:K06188 ko00000,ko02000 1.A.8,1.A.8.1,1.A.8.2 Bacteria 2HZ9W@201174,4CZ5Q@85004,COG0580@1,COG0580@2 NA|NA|NA U Belongs to the MIP aquaporin (TC 1.A.8) family KDBPDICH_01245 78346.BRUM_1030 8.2e-34 149.4 Bifidobacteriales Bacteria 2AXAE@1,2IQKC@201174,31P9H@2,4D18B@85004 NA|NA|NA KDBPDICH_01246 547043.BIFPSEUDO_03735 0.0 1077.4 Bifidobacteriales purH GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 iHN637.CLJU_RS04230,iJN678.purH Bacteria 2GJWU@201174,4CZ3P@85004,COG0138@1,COG0138@2 NA|NA|NA F Bifunctional purine biosynthesis protein PurH KDBPDICH_01247 547043.BIFPSEUDO_03736 1.8e-246 858.2 Bifidobacteriales GO:0008150,GO:0040007 Bacteria 2EKVE@1,2HZ8H@201174,33EIZ@2,4CYRN@85004 NA|NA|NA KDBPDICH_01248 566552.BIFCAT_00724 2.6e-161 574.7 Bifidobacteriales sucD GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 6.2.1.5 ko:K01902 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 Bacteria 2GK00@201174,4CYX1@85004,COG0074@1,COG0074@2 NA|NA|NA C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit KDBPDICH_01249 547043.BIFPSEUDO_03738 2.2e-221 774.6 Bifidobacteriales sucC 6.2.1.5 ko:K01903 ko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374,M00620 R00405,R02404 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKSB@201174,4CZCQ@85004,COG0045@1,COG0045@2 NA|NA|NA F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit KDBPDICH_01250 547043.BIFPSEUDO_03739 1.8e-99 368.6 Bifidobacteriales apt GO:0003674,GO:0003824,GO:0003999,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006144,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.22,2.4.2.7 ko:K00759,ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 R00190,R01229,R02142,R04378 RC00063,RC00122 ko00000,ko00001,ko01000,ko04147 Bacteria 2IM7C@201174,4CZ9H@85004,COG0503@1,COG0503@2 NA|NA|NA F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis KDBPDICH_01251 547043.BIFPSEUDO_03740 1.8e-50 205.3 Bifidobacteriales yajC GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 2IKUJ@201174,4D139@85004,COG1862@1,COG1862@2 NA|NA|NA U Preprotein translocase subunit KDBPDICH_01252 547043.BIFPSEUDO_03741 5.6e-200 703.4 Bifidobacteriales ruvB GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 2GJZF@201174,4CZGU@85004,COG2255@1,COG2255@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing KDBPDICH_01253 547043.BIFPSEUDO_03742 1e-105 389.4 Bifidobacteriales ruvA GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 2GN17@201174,4CZCE@85004,COG0632@1,COG0632@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB KDBPDICH_01254 547043.BIFPSEUDO_03743 1e-99 369.4 Bifidobacteriales ruvC GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 ko:K01159 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 2GJI5@201174,4CZ79@85004,COG0817@1,COG0817@2 NA|NA|NA L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group KDBPDICH_01255 547043.BIFPSEUDO_03744 5.2e-128 463.8 Bifidobacteriales yebC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 Bacteria 2GJ4G@201174,4CZ9X@85004,COG0217@1,COG0217@2 NA|NA|NA K transcriptional regulatory protein KDBPDICH_01256 547043.BIFPSEUDO_03745 3.5e-112 411.0 Bifidobacteriales pgsA1 GO:0003674,GO:0003824,GO:0003881,GO:0003882,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.11,2.7.8.5 ko:K00995,ko:K00999 ko00562,ko00564,ko01100,ko04070,map00562,map00564,map01100,map04070 R01801,R01802 RC00002,RC00017,RC00078,RC02795 ko00000,ko00001,ko01000 Bacteria 2GYKW@201174,4D0NB@85004,COG0558@1,COG0558@2 NA|NA|NA I CDP-alcohol phosphatidyltransferase KDBPDICH_01257 547043.BIFPSEUDO_03746 0.0 1370.1 Bifidobacteriales thrS GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GKTC@201174,4CZD3@85004,COG0441@1,COG0441@2 NA|NA|NA J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) KDBPDICH_01258 547043.BIFPSEUDO_03747 1.6e-141 508.8 Bifidobacteriales GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 Bacteria 2GJ3C@201174,4CYYH@85004,COG3879@1,COG3879@2 NA|NA|NA S Bacterial protein of unknown function (DUF881) KDBPDICH_01259 547043.BIFPSEUDO_03748 4.2e-45 187.2 Bifidobacteriales sbp Bacteria 2IKJW@201174,4D12G@85004,COG3856@1,COG3856@2 NA|NA|NA S Protein of unknown function (DUF1290) KDBPDICH_01260 547043.BIFPSEUDO_03749 2.6e-172 611.3 Bifidobacteriales GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 Bacteria 2GMS5@201174,4CZ72@85004,COG3879@1,COG3879@2 NA|NA|NA S Bacterial protein of unknown function (DUF881) KDBPDICH_01261 547043.BIFPSEUDO_03750 1e-102 379.4 Bifidobacteriales pgsA GO:0003674,GO:0003824,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 R01801,R02030 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 Bacteria 2GM3F@201174,4CZGD@85004,COG0558@1,COG0558@2 NA|NA|NA I Belongs to the CDP-alcohol phosphatidyltransferase class-I family KDBPDICH_01262 547043.BIFPSEUDO_03751 3.9e-156 557.4 Bifidobacteriales hisG GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01071 RC02819,RC03200 ko00000,ko00001,ko00002,ko01000 Bacteria 2GNAX@201174,4CZ66@85004,COG0040@1,COG0040@2 NA|NA|NA F ATP phosphoribosyltransferase KDBPDICH_01263 547043.BIFPSEUDO_03752 1.9e-40 171.4 Bifidobacteriales hisE GO:0000105,GO:0000287,GO:0003674,GO:0003824,GO:0004635,GO:0004636,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052803,GO:0071704,GO:0071944,GO:0075136,GO:0075139,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31,5.3.1.16 ko:K01523,ko:K01814,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037,R04640 RC00002,RC00945,RC01055 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_0880,iECW_1372.ECW_m2186,iEKO11_1354.EKO11_1768,iSB619.SA_RS14110,iUMN146_1321.UM146_06665,iWFL_1372.ECW_m2186,iYO844.BSU34860 Bacteria 2IQ4D@201174,4D108@85004,COG0140@1,COG0140@2 NA|NA|NA E Phosphoribosyl-ATP pyrophosphohydrolase KDBPDICH_01264 566552.BIFCAT_00708 4.2e-97 360.9 Bifidobacteriales rpe GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529 RC00540 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJZ9@201174,4CYX0@85004,COG0036@1,COG0036@2 NA|NA|NA G Ribulose-phosphate 3-epimerase KDBPDICH_01265 566552.BIFCAT_00707 7.9e-180 636.3 Bifidobacteriales lgt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009249,GO:0009898,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.199 ko:K03438,ko:K13292 ko00000,ko01000,ko03009 Bacteria 2GKSS@201174,4CYV8@85004,COG0682@1,COG0682@2 NA|NA|NA M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins KDBPDICH_01266 547043.BIFPSEUDO_03756 1e-162 579.3 Bifidobacteriales trpA GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 2GN6T@201174,4D0A3@85004,COG0159@1,COG0159@2 NA|NA|NA E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate KDBPDICH_01267 547043.BIFPSEUDO_03757 0.0 1375.9 Bifidobacteriales trpB GO:0000162,GO:0003674,GO:0003824,GO:0004834,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48,4.2.1.20 ko:K01609,ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722,R03508 RC00209,RC00210,RC00700,RC00701,RC00944,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 2GM7Z@201174,4CZJW@85004,COG0133@1,COG0133@2,COG0134@1,COG0134@2 NA|NA|NA E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine KDBPDICH_01268 547043.BIFPSEUDO_03758 7.1e-297 1025.8 Bifidobacteriales trpE 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKJT@201174,4CZHW@85004,COG0147@1,COG0147@2 NA|NA|NA E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia KDBPDICH_01269 547043.BIFPSEUDO_03759 2.9e-72 277.7 Bifidobacteriales hisI GO:0008150,GO:0040007 3.5.4.19,3.6.1.31 ko:K01496,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037 RC00002,RC01055 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1606 Bacteria 2IKKU@201174,4D0WW@85004,COG0139@1,COG0139@2 NA|NA|NA E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP KDBPDICH_01270 547043.BIFPSEUDO_03760 3e-139 501.1 Bifidobacteriales hisF GO:0000107,GO:0003674,GO:0003824,GO:0008150,GO:0016740,GO:0016757,GO:0016763,GO:0040007 4.1.3.27 ko:K01657,ko:K02500 ko00340,ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00340,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023,M00026 R00985,R00986,R04558 RC00010,RC01190,RC01943,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 Bacteria 2GIRP@201174,4CZ8Z@85004,COG0107@1,COG0107@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit KDBPDICH_01271 547043.BIFPSEUDO_03761 3.2e-225 787.3 Bifidobacteriales rlmN GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 ko:K06941 ko00000,ko01000,ko03009 Bacteria 2GJ48@201174,4CZG2@85004,COG0820@1,COG0820@2 NA|NA|NA J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs KDBPDICH_01272 547043.BIFPSEUDO_03762 6.1e-177 626.7 Bifidobacteriales cdsA GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41,2.7.7.67 ko:K00981,ko:K07098,ko:K19664 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799,R08966 RC00002 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1397 Bacteria 2I7ZA@201174,4CYZM@85004,COG0575@1,COG0575@2 NA|NA|NA I Cytidylyltransferase family KDBPDICH_01273 547043.BIFPSEUDO_03763 7.6e-92 343.2 Bifidobacteriales frr GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02838 ko00000,ko03012 Bacteria 2GJ9J@201174,4CYTF@85004,COG0233@1,COG0233@2 NA|NA|NA J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another KDBPDICH_01274 547043.BIFPSEUDO_03764 2.6e-135 488.0 Bifidobacteriales pyrH GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006225,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009163,GO:0009165,GO:0009185,GO:0009188,GO:0009193,GO:0009194,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0033862,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042455,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046048,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046872,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 R00158 RC00002 ko00000,ko00001,ko01000 iSB619.SA_RS06240 Bacteria 2GKWQ@201174,4CZEK@85004,COG0528@1,COG0528@2 NA|NA|NA F Catalyzes the reversible phosphorylation of UMP to UDP KDBPDICH_01276 547043.BIFPSEUDO_03766 5e-143 513.8 Bifidobacteriales tsf GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02357 ko00000,ko03012,ko03029 Bacteria 2GK4M@201174,4CYVQ@85004,COG0264@1,COG0264@2 NA|NA|NA J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome KDBPDICH_01277 547043.BIFPSEUDO_03767 1.9e-139 501.9 Bifidobacteriales rpsB GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02967 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GMYC@201174,4CZ96@85004,COG0052@1,COG0052@2 NA|NA|NA J Belongs to the universal ribosomal protein uS2 family KDBPDICH_01278 78346.BRUM_0998 1.3e-84 318.9 Bifidobacteriales def 3.5.1.88 ko:K01462 ko00000,ko01000 Bacteria 2GJ87@201174,4CZ63@85004,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions KDBPDICH_01279 547043.BIFPSEUDO_03769 0.0 1293.5 Bifidobacteriales fadD3 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 Bacteria 2GIXQ@201174,4CYVD@85004,COG1022@1,COG1022@2 NA|NA|NA I long-chain-fatty acid CoA ligase KDBPDICH_01280 547043.BIFPSEUDO_03770 3.1e-121 441.0 Bifidobacteriales Bacteria 2BGJW@1,2IR97@201174,32AI7@2,4D19G@85004 NA|NA|NA KDBPDICH_01282 547043.BIFPSEUDO_03772 5e-190 670.2 Bifidobacteriales prs GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006015,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0019637,GO:0019693,GO:0030145,GO:0030312,GO:0040007,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046390,GO:0046391,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901576 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ9S@201174,4CYRD@85004,COG0462@1,COG0462@2 NA|NA|NA F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) KDBPDICH_01283 547043.BIFPSEUDO_03773 1.8e-141 508.4 Bifidobacteriales nadD GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18,3.6.1.55 ko:K00969,ko:K03574 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 2GMFZ@201174,4CZ82@85004,COG1057@1,COG1057@2 NA|NA|NA H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) KDBPDICH_01284 547043.BIFPSEUDO_03774 3.2e-101 374.4 Bifidobacteriales Bacteria 2A13J@1,2GKGD@201174,30P9F@2,4D0QR@85004 NA|NA|NA KDBPDICH_01285 547043.BIFPSEUDO_03775 2.9e-243 847.4 Bifidobacteriales proA GO:0003674,GO:0003824,GO:0004350,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016620,GO:0016903,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 1.2.1.41 ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 M00015 R03313 RC00684 ko00000,ko00001,ko00002,ko01000 iLJ478.TM0293,iNJ661.Rv2427c,iYO844.BSU13130 Bacteria 2GISA@201174,4CZ2H@85004,COG0014@1,COG0014@2 NA|NA|NA E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate KDBPDICH_01286 547043.BIFPSEUDO_03776 1.4e-250 871.7 Bifidobacteriales glyA GO:0001505,GO:0003674,GO:0003824,GO:0004372,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006544,GO:0006563,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009069,GO:0009605,GO:0009607,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016742,GO:0017144,GO:0019752,GO:0019842,GO:0020012,GO:0030170,GO:0030312,GO:0030682,GO:0036094,GO:0042133,GO:0042783,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044464,GO:0046983,GO:0048037,GO:0050662,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0065007,GO:0065008,GO:0070279,GO:0071704,GO:0071944,GO:0075136,GO:0097159,GO:1901363,GO:1901564,GO:1901605 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 Bacteria 2GK7U@201174,4CZBV@85004,COG0112@1,COG0112@2 NA|NA|NA E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism KDBPDICH_01287 547043.BIFPSEUDO_03778 2.3e-284 984.2 Bifidobacteriales thrC 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS16355,iIT341.HP0098 Bacteria 2GIRY@201174,4CYS0@85004,COG0498@1,COG0498@2 NA|NA|NA E Threonine synthase N terminus KDBPDICH_01288 1680.BADO_0952 4.6e-233 813.5 Bifidobacteriales Bacteria 2I8HS@201174,4CZ4M@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_01289 547043.BIFPSEUDO_03781 1e-107 396.0 Bifidobacteriales 3.1.3.27 ko:K18697 ko00564,map00564 R02029 RC00017 ko00000,ko00001,ko01000 Bacteria 2GMVR@201174,4D0CF@85004,COG0560@1,COG0560@2 NA|NA|NA E haloacid dehalogenase-like hydrolase KDBPDICH_01290 547043.BIFPSEUDO_03782 4.3e-174 617.1 Bifidobacteriales Bacteria 2ICFW@201174,4D07M@85004,COG3177@1,COG3177@2 NA|NA|NA G Fic/DOC family KDBPDICH_01291 547043.BIFPSEUDO_03783 6.9e-146 523.1 Bifidobacteriales Bacteria 2ENA9@1,2IHCR@201174,33FXZ@2,4CZCJ@85004 NA|NA|NA KDBPDICH_01292 547043.BIFPSEUDO_03784 9.1e-164 582.8 Bifidobacteriales Bacteria 2GJGM@201174,4CZMJ@85004,COG1028@1,COG1028@2 NA|NA|NA IQ Enoyl-(Acyl carrier protein) reductase KDBPDICH_01293 547043.BIFPSEUDO_03785 1.4e-167 595.5 Bifidobacteriales Bacteria 2HZIM@201174,4D0K3@85004,COG0388@1,COG0388@2 NA|NA|NA S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source KDBPDICH_01294 547043.BIFPSEUDO_03786 5.5e-77 293.9 Bifidobacteriales 3.4.13.22 ko:K08641,ko:K11206 ko01502,ko02020,map01502,map02020 M00651 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 Bacteria 2HZIM@201174,4D0K3@85004,COG0388@1,COG0388@2 NA|NA|NA S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source KDBPDICH_01295 566552.BIFCAT_00673 1.1e-95 355.9 Bifidobacteriales bcp GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0032843,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 ko:K03564 ko00000,ko01000 iPC815.YPO3064 Bacteria 2IHZ6@201174,4D0PN@85004,COG1225@1,COG1225@2 NA|NA|NA O Redoxin KDBPDICH_01296 547043.BIFPSEUDO_03790 1.9e-25 121.3 Bifidobacteriales Bacteria 2BDTE@1,2HD65@201174,327H7@2,4D2ND@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_01297 1680.BADO_0967 2.1e-94 351.7 Bifidobacteriales ko:K07005 ko00000 Bacteria 2IGUA@201174,4D0SF@85004,COG3467@1,COG3467@2 NA|NA|NA S Pyridoxamine 5'-phosphate oxidase KDBPDICH_01298 547043.BIFPSEUDO_03792 0.0 1248.8 Bifidobacteriales Bacteria 2DBBJ@1,2GKDX@201174,2Z889@2,4CZGI@85004 NA|NA|NA S Histidine phosphatase superfamily (branch 2) KDBPDICH_01299 547043.BIFPSEUDO_03793 3.2e-45 187.2 Bacteria Bacteria COG2801@1,COG2801@2 NA|NA|NA L transposition KDBPDICH_01300 1680.BADO_0968 1.3e-22 112.1 Bifidobacteriales Bacteria 2HQSF@201174,4D0CG@85004,COG2421@1,COG2421@2 NA|NA|NA C Acetamidase/Formamidase family KDBPDICH_01301 547043.BIFPSEUDO_03797 1.7e-58 231.9 Bifidobacteriales ko:K07978,ko:K07979 ko00000,ko03000 Bacteria 2IQEW@201174,4D152@85004,COG1725@1,COG1725@2 NA|NA|NA K helix_turn_helix gluconate operon transcriptional repressor KDBPDICH_01302 547043.BIFPSEUDO_03798 9.2e-175 619.4 Bifidobacteriales ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GRE8@201174,4CZBH@85004,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities KDBPDICH_01303 547043.BIFPSEUDO_03799 7.4e-124 449.9 Bifidobacteriales Bacteria 29XRE@1,2IJCR@201174,30JH3@2,4D0VP@85004 NA|NA|NA S ABC-2 family transporter protein KDBPDICH_01304 547043.BIFPSEUDO_03800 4.4e-123 447.2 Bifidobacteriales Bacteria 2I362@201174,4CZ8D@85004,COG0637@1,COG0637@2 NA|NA|NA S Haloacid dehalogenase-like hydrolase KDBPDICH_01305 547043.BIFPSEUDO_03801 8.1e-262 909.4 Bifidobacteriales recN GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0030312,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:1901360 ko:K03631,ko:K13582 ko04112,map04112 ko00000,ko00001,ko03400 Bacteria 2GIVG@201174,4CYYF@85004,COG0497@1,COG0497@2 NA|NA|NA L May be involved in recombinational repair of damaged DNA KDBPDICH_01306 547043.BIFPSEUDO_03802 2e-177 628.2 Bifidobacteriales nadK GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0006082,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006793,GO:0006796,GO:0006797,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 R00104 RC00002,RC00078 ko00000,ko00001,ko01000 Bacteria 2GKM2@201174,4CYZ0@85004,COG0061@1,COG0061@2 NA|NA|NA H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP KDBPDICH_01307 547043.BIFPSEUDO_03803 2.1e-266 924.5 Bifidobacteriales trkB ko:K03498 ko00000,ko02000 2.A.38.1,2.A.38.4 Bacteria 2GKKS@201174,4CZH7@85004,COG0168@1,COG0168@2 NA|NA|NA P Cation transport protein KDBPDICH_01308 547043.BIFPSEUDO_03804 3e-116 424.5 Bifidobacteriales trkA ko:K03499 ko00000,ko02000 2.A.38.1,2.A.38.4 Bacteria 2IA09@201174,4CZVT@85004,COG0569@1,COG0569@2 NA|NA|NA P TrkA-N domain KDBPDICH_01309 547043.BIFPSEUDO_03805 2.9e-134 484.6 Bifidobacteriales tlyA GO:0000154,GO:0001510,GO:0001897,GO:0001906,GO:0001907,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019835,GO:0019836,GO:0022613,GO:0031167,GO:0031640,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035821,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044003,GO:0044004,GO:0044085,GO:0044179,GO:0044237,GO:0044238,GO:0044260,GO:0044364,GO:0044403,GO:0044419,GO:0044764,GO:0046483,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.226,2.1.1.227 ko:K06442 ko00000,ko01000,ko03009 Bacteria 2GJVT@201174,4CZSS@85004,COG1189@1,COG1189@2 NA|NA|NA J Ribosomal RNA large subunit methyltransferase J KDBPDICH_01310 547043.BIFPSEUDO_03806 1.1e-192 679.1 Bifidobacteriales yutF GO:0000121,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009395,GO:0009987,GO:0016042,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0030145,GO:0042578,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0046434,GO:0046475,GO:0046486,GO:0046503,GO:0046872,GO:0046914,GO:0046983,GO:0050897,GO:0071704,GO:1901575 3.1.3.41 ko:K01101 ko00627,ko01120,map00627,map01120 R03024 RC00151 ko00000,ko00001,ko01000 Bacteria 2GK7V@201174,4CZ1Z@85004,COG0647@1,COG0647@2 NA|NA|NA G Haloacid dehalogenase-like hydrolase KDBPDICH_01311 78346.BRUM_1059 1.9e-141 509.6 Bifidobacteriales Bacteria 2GKX5@201174,4CYXN@85004,COG0457@1,COG0457@2 NA|NA|NA L Tetratricopeptide repeat KDBPDICH_01312 547043.BIFPSEUDO_03809 1.3e-251 875.2 Bifidobacteriales tyrS GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0030312,GO:0034641,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 ko:K01866 ko00970,map00970 M00359,M00360 R02918 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 2GJPR@201174,4CZKG@85004,COG0162@1,COG0162@2 NA|NA|NA J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) KDBPDICH_01313 547043.BIFPSEUDO_03810 0.0 1217.2 Bifidobacteriales Bacteria 2IB0C@201174,4D0E9@85004,COG4905@1,COG4905@2,COG5523@1,COG5523@2 NA|NA|NA S Protein of unknown function (DUF975) KDBPDICH_01314 547043.BIFPSEUDO_03811 4.5e-66 257.3 Bifidobacteriales Bacteria 2IA3M@201174,4CZY7@85004,COG4905@1,COG4905@2 NA|NA|NA S Putative ABC-transporter type IV KDBPDICH_01315 547043.BIFPSEUDO_03812 1.2e-31 141.7 Bifidobacteriales 6.1.1.14 ko:K01879,ko:K06950 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2IFXP@201174,4D0P2@85004,COG1418@1,COG1418@2 NA|NA|NA S Metal dependent phosphohydrolases with conserved 'HD' motif. KDBPDICH_01316 547043.BIFPSEUDO_03813 8.3e-279 965.7 Bifidobacteriales argH GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0030312,GO:0040007,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 iJN678.argH Bacteria 2GJ2A@201174,4CZ50@85004,COG0165@1,COG0165@2 NA|NA|NA E argininosuccinate lyase KDBPDICH_01317 547043.BIFPSEUDO_03814 4.6e-238 830.1 Bifidobacteriales argG GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0071944,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 iNJ661.Rv1658 Bacteria 2GK96@201174,4CZ2R@85004,COG0137@1,COG0137@2 NA|NA|NA E Belongs to the argininosuccinate synthase family. Type 1 subfamily KDBPDICH_01318 547043.BIFPSEUDO_03815 2.3e-82 311.6 Bifidobacteriales argR GO:0000820,GO:0000821,GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006259,GO:0006310,GO:0006355,GO:0006520,GO:0006521,GO:0006525,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016597,GO:0019219,GO:0019222,GO:0019752,GO:0022607,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031333,GO:0031334,GO:0031406,GO:0032991,GO:0032993,GO:0033238,GO:0033241,GO:0034214,GO:0034618,GO:0034641,GO:0036094,GO:0042150,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043254,GO:0043436,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051259,GO:0060255,GO:0062012,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140110,GO:1900079,GO:1900081,GO:1901360,GO:1901363,GO:1901564,GO:1901605,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2000144,GO:2000282,GO:2001141 ko:K03402 ko00000,ko03000 Bacteria 2GKA5@201174,4D0VM@85004,COG1438@1,COG1438@2 NA|NA|NA K Regulates arginine biosynthesis genes KDBPDICH_01319 547043.BIFPSEUDO_03816 1.6e-185 655.2 Bifidobacteriales argF GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0040007,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 M00029,M00844 R01398 RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ6H@201174,4CZGN@85004,COG0078@1,COG0078@2 NA|NA|NA E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline KDBPDICH_01320 566552.BIFCAT_00646 4.2e-242 843.6 Bifidobacteriales argD GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0008150,GO:0019842,GO:0030170,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 2GKE9@201174,4CZGW@85004,COG4992@1,COG4992@2 NA|NA|NA E Aminotransferase class-III KDBPDICH_01321 547043.BIFPSEUDO_03819 2.8e-179 634.4 Bifidobacteriales argB GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0030312,GO:0031406,GO:0034618,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS10565,iJN678.argB,iLJ478.TM1784 Bacteria 2GKDS@201174,4CYYX@85004,COG0548@1,COG0548@2 NA|NA|NA E Belongs to the acetylglutamate kinase family. ArgB subfamily KDBPDICH_01322 547043.BIFPSEUDO_03820 8.8e-215 752.7 Bifidobacteriales argJ GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35,2.7.2.8 ko:K00620,ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02282,R02649 RC00002,RC00004,RC00043,RC00064 ko00000,ko00001,ko00002,ko01000 Bacteria 2GIW0@201174,4CZQQ@85004,COG1364@1,COG1364@2 NA|NA|NA E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate KDBPDICH_01323 547043.BIFPSEUDO_03821 9.1e-206 722.6 Bifidobacteriales argC GO:0000166,GO:0003674,GO:0005488,GO:0008150,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0048037,GO:0050661,GO:0050662,GO:0070401,GO:0097159,GO:1901265,GO:1901363 1.2.1.38 ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R03443 RC00684 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKQK@201174,4CZNC@85004,COG0002@1,COG0002@2 NA|NA|NA E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde KDBPDICH_01324 547043.BIFPSEUDO_03822 4.9e-99 367.5 Bifidobacteriales Bacteria 2AHAX@1,2IPJ5@201174,317M8@2,4D11M@85004 NA|NA|NA KDBPDICH_01325 547043.BIFPSEUDO_03823 0.0 1744.2 Bifidobacteriales pheT GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0019538,GO:0019752,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GMFD@201174,4CYUM@85004,COG0072@1,COG0072@2,COG0073@1,COG0073@2 NA|NA|NA J Phenylalanyl-tRNA synthetase beta KDBPDICH_01326 547043.BIFPSEUDO_03824 2.4e-203 714.5 Bifidobacteriales pheS GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GJGG@201174,4CZ78@85004,COG0016@1,COG0016@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily KDBPDICH_01327 547043.BIFPSEUDO_03825 3.3e-158 564.3 Bifidobacteriales IV02_28330 2.1.1.185,2.1.1.34 ko:K00556,ko:K03218,ko:K03437 ko00000,ko01000,ko03009,ko03016 Bacteria 2GJI6@201174,4CYZQ@85004,COG0566@1,COG0566@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family KDBPDICH_01328 547043.BIFPSEUDO_03828 4.8e-99 367.1 Bifidobacteriales yvdD 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 Bacteria 2GMM1@201174,4D031@85004,COG1611@1,COG1611@2 NA|NA|NA S Possible lysine decarboxylase KDBPDICH_01329 547043.BIFPSEUDO_03830 4.5e-18 96.7 Bacteria Bacteria 2ENRX@1,33GD2@2 NA|NA|NA KDBPDICH_01331 663278.Ethha_1826 1.5e-17 94.7 Ruminococcaceae ko:K07451 ko00000,ko01000,ko02048 Bacteria 1V7XZ@1239,24JNG@186801,3WSGV@541000,COG1403@1,COG1403@2 NA|NA|NA L HNH endonuclease KDBPDICH_01332 547043.BIFPSEUDO_03833 2.2e-113 414.8 Bifidobacteriales ung2 3.2.2.27 ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 2IH02@201174,4D0XP@85004,COG1573@1,COG1573@2 NA|NA|NA L Uracil DNA glycosylase superfamily KDBPDICH_01334 547043.BIFPSEUDO_03835 3.4e-42 178.7 Bacteria Bacteria COG1002@1,COG1002@2 NA|NA|NA V DNA modification KDBPDICH_01335 547043.BIFPSEUDO_03836 7.8e-282 975.7 Bifidobacteriales glnA GO:0001968,GO:0003674,GO:0003824,GO:0004356,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009405,GO:0009605,GO:0009607,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016020,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019222,GO:0019752,GO:0019899,GO:0020012,GO:0030162,GO:0030312,GO:0030682,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0035375,GO:0040007,GO:0043207,GO:0043436,GO:0044044,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046394,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0060255,GO:0065007,GO:0070613,GO:0071704,GO:0071944,GO:0075136,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903317,GO:1903319 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 Bacteria 2GMN1@201174,4CZNK@85004,COG0174@1,COG0174@2 NA|NA|NA E glutamine synthetase KDBPDICH_01336 547043.BIFPSEUDO_03838 6e-143 513.5 Bifidobacteriales Bacteria 2DBPK@1,2I87Y@201174,2ZA9M@2,4D302@85004 NA|NA|NA S Domain of unknown function (DUF4191) KDBPDICH_01337 547043.BIFPSEUDO_03839 8.4e-247 859.4 Bifidobacteriales lpdA 1.16.1.1,1.8.1.4 ko:K00382,ko:K00520 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GIXY@201174,4CZEI@85004,COG1249@1,COG1249@2 NA|NA|NA C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family KDBPDICH_01338 1680.BADO_1002 3.6e-93 347.8 Bifidobacteriales GO:0008150,GO:0009605,GO:0009607,GO:0020012,GO:0030682,GO:0042783,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0075136 Bacteria 2AN86@1,2HWWU@201174,31D67@2,4CZZS@85004 NA|NA|NA S Protein of unknown function (DUF3043) KDBPDICH_01339 547043.BIFPSEUDO_03841 1.9e-253 881.3 Bifidobacteriales argE Bacteria 2GM84@201174,4CYZT@85004,COG0624@1,COG0624@2 NA|NA|NA E Peptidase dimerisation domain KDBPDICH_01340 566552.BIFCAT_00622 3.1e-145 521.2 Bifidobacteriales cbiQ ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 2IDC9@201174,4CZM8@85004,COG0619@1,COG0619@2 NA|NA|NA P Cobalt transport protein KDBPDICH_01341 566552.BIFCAT_00621 3.1e-265 920.6 Bifidobacteriales ykoD ko:K01990,ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 M00254,M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 2GJ0M@201174,4CYZ6@85004,COG1122@1,COG1122@2 NA|NA|NA P ATPases associated with a variety of cellular activities KDBPDICH_01342 1680.BADO_1006 2.2e-84 318.5 Bifidobacteriales ykoE ko:K16925 M00582 ko00000,ko00002,ko02000 3.A.1.30 Bacteria 2IDAN@201174,4D00D@85004,COG4721@1,COG4721@2 NA|NA|NA S ABC-type cobalt transport system, permease component KDBPDICH_01343 547043.BIFPSEUDO_03847 8.7e-204 716.1 Bifidobacteriales mrp GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0040007,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K03593 ko00000,ko03029,ko03036 Bacteria 2GJUZ@201174,4CZDC@85004,COG0489@1,COG0489@2 NA|NA|NA D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP KDBPDICH_01344 547043.BIFPSEUDO_03848 0.0 1781.9 Bifidobacteriales ligA GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016874,GO:0016886,GO:0030312,GO:0033554,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 Bacteria 2GJUY@201174,4CZBC@85004,COG0272@1,COG0272@2 NA|NA|NA L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA KDBPDICH_01345 566552.BIFCAT_00615 0.0 2035.8 Bifidobacteriales Bacteria 2GWSR@201174,4CZ33@85004,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat KDBPDICH_01346 547043.BIFPSEUDO_03850 0.0 1438.7 Bifidobacteriales Bacteria 2GNXR@201174,4CZXK@85004,COG1807@1,COG1807@2 NA|NA|NA M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family KDBPDICH_01347 547043.BIFPSEUDO_03851 0.0 1107.4 Bifidobacteriales 2.8.2.22 ko:K01023 ko00000,ko01000 Bacteria 2A5FI@1,2I8X3@201174,30U5H@2,4D09F@85004 NA|NA|NA S Arylsulfotransferase Ig-like domain KDBPDICH_01348 547043.BIFPSEUDO_03852 5e-145 520.4 Bifidobacteriales bioM ko:K16784,ko:K16786 ko02010,map02010 M00581,M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 2I9PF@201174,4D04S@85004,COG1122@1,COG1122@2 NA|NA|NA P ATPases associated with a variety of cellular activities KDBPDICH_01349 547043.BIFPSEUDO_03853 1.8e-220 771.5 Bifidobacteriales Bacteria 2GNMB@201174,4CZ48@85004,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase class I and II KDBPDICH_01350 547043.BIFPSEUDO_03854 1.6e-140 505.4 Bifidobacteriales ppgK 2.7.1.2,2.7.1.63 ko:K00845,ko:K00886 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786,R02187,R02189 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJA0@201174,4CYR1@85004,COG1940@1,COG1940@2 NA|NA|NA GK ROK family KDBPDICH_01351 547043.BIFPSEUDO_03856 6.3e-201 706.4 Bifidobacteriales Bacteria 2GMQQ@201174,4CZRJ@85004,COG1216@1,COG1216@2 NA|NA|NA S Glycosyltransferase, group 2 family protein KDBPDICH_01352 547043.BIFPSEUDO_03858 4.8e-145 520.4 Bifidobacteriales tenA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.2 ko:K03707 ko00730,ko01100,map00730,map01100 R02133,R09993 RC00224,RC00652,RC02832 ko00000,ko00001,ko01000,ko03000 Bacteria 2IA0S@201174,4CZUI@85004,COG0819@1,COG0819@2 NA|NA|NA K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway KDBPDICH_01353 547043.BIFPSEUDO_03859 2.4e-47 194.5 Bifidobacteriales yhbY GO:0000027,GO:0000028,GO:0000966,GO:0000967,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043021,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1990275 ko:K07574 ko00000,ko03009 Bacteria 2IKSS@201174,4D10K@85004,COG1534@1,COG1534@2 NA|NA|NA J CRS1_YhbY KDBPDICH_01354 547043.BIFPSEUDO_03860 0.0 1494.2 Bifidobacteriales ecfA ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 2I2G4@201174,4CZJE@85004,COG0619@1,COG0619@2,COG1129@1,COG1129@2 NA|NA|NA GP ABC transporter, ATP-binding protein KDBPDICH_01355 547043.BIFPSEUDO_03861 6.1e-109 400.2 Bifidobacteriales ribU GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656 Bacteria 2IAX0@201174,4CZQD@85004,COG3601@1,COG3601@2 NA|NA|NA U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins KDBPDICH_01356 566552.BIFCAT_00603 0.0 2366.7 Bifidobacteriales snf 2.7.11.1 ko:K08282 ko00000,ko01000 Bacteria 2GISC@201174,4CZSD@85004,COG0553@1,COG0553@2,COG4715@1,COG4715@2 NA|NA|NA KL Psort location Cytoplasmic, score 8.87 KDBPDICH_01357 547043.BIFPSEUDO_03864 5.1e-39 166.8 Bacteria pepC GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.4.22.40 ko:K01372 ko00000,ko01000,ko01002 Bacteria COG3579@1,COG3579@2 NA|NA|NA E homocysteine catabolic process KDBPDICH_01358 547043.BIFPSEUDO_03865 2.9e-107 394.8 Bifidobacteriales kcsA ko:K10716 ko00000,ko02000 1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6 Bacteria 2GKNF@201174,4CZUV@85004,COG1226@1,COG1226@2 NA|NA|NA U Ion channel KDBPDICH_01359 547043.BIFPSEUDO_03866 1.1e-186 659.1 Bifidobacteriales ghrA Bacteria 2GP09@201174,4CZUN@85004,COG0111@1,COG0111@2 NA|NA|NA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KDBPDICH_01360 547043.BIFPSEUDO_03867 1.7e-84 318.5 Bifidobacteriales dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106026,GO:0106074,GO:0140098,GO:0140101,GO:1901360 ko:K07560 ko00000,ko01000,ko03016 Bacteria 2IKVR@201174,4D0VE@85004,COG1490@1,COG1490@2 NA|NA|NA J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality KDBPDICH_01361 547043.BIFPSEUDO_03868 3.6e-125 454.1 Bifidobacteriales 3.2.1.8 ko:K01181,ko:K06889 ko00000,ko01000 Bacteria 2HZF3@201174,4D06X@85004,COG1073@1,COG1073@2 NA|NA|NA S alpha beta KDBPDICH_01362 547043.BIFPSEUDO_03870 1.1e-29 135.2 Bifidobacteriales Bacteria 2E37J@1,2GR14@201174,32Y79@2,4D1IM@85004 NA|NA|NA KDBPDICH_01363 547043.BIFPSEUDO_03486 3.3e-166 590.9 Bifidobacteriales yeaD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 4.2.1.9,5.1.3.15 ko:K01687,ko:K01792 ko00010,ko00290,ko00770,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00010,map00290,map00770,map01100,map01110,map01120,map01130,map01210,map01230 M00019,M00570 R01209,R02739,R04441,R05070 RC00468,RC00563,RC01714 ko00000,ko00001,ko00002,ko01000 Bacteria 2IIUH@201174,4CZWN@85004,COG0676@1,COG0676@2 NA|NA|NA G Aldose 1-epimerase KDBPDICH_01364 547043.BIFPSEUDO_03487 9.4e-101 373.2 Bifidobacteriales pdtaR GO:0000160,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016020,GO:0023052,GO:0030312,GO:0035556,GO:0040007,GO:0043167,GO:0043168,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071944 ko:K22010 M00839 ko00000,ko00002,ko02022 Bacteria 2GK7T@201174,4CYS7@85004,COG3707@1,COG3707@2 NA|NA|NA T Response regulator receiver domain protein KDBPDICH_01365 547043.BIFPSEUDO_03488 0.0 1817.4 Bifidobacteriales polA GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 Bacteria 2GJY2@201174,4CYVK@85004,COG0258@1,COG0258@2,COG0749@1,COG0749@2 NA|NA|NA L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity KDBPDICH_01366 566552.BIFCAT_01026 1.9e-164 585.1 Bifidobacteriales yqfO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.5.4.16 ko:K22391 ko00790,ko01100,map00790,map01100 M00126 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKHZ@201174,4CYXC@85004,COG0327@1,COG0327@2 NA|NA|NA L NIF3 (NGG1p interacting factor 3) KDBPDICH_01367 566552.BIFCAT_01025 2.4e-116 424.9 Bifidobacteriales 3.6.1.13 ko:K01515 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000 Bacteria 2IIY0@201174,4D0P8@85004,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain KDBPDICH_01368 547043.BIFPSEUDO_03491 0.0 1456.8 Bifidobacteriales glgX 3.2.1.68 ko:K01214 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R09995,R11261 ko00000,ko00001,ko00002,ko01000 CBM48,GH13 Bacteria 2GJ00@201174,4CZGR@85004,COG1523@1,COG1523@2 NA|NA|NA G Belongs to the glycosyl hydrolase 13 family KDBPDICH_01369 547043.BIFPSEUDO_03492 1.4e-212 745.3 Bifidobacteriales ykiI Bacteria 2DSXT@1,2GKR7@201174,32UTZ@2,4CZBW@85004 NA|NA|NA KDBPDICH_01371 1437608.BBIA_1447 1.6e-137 496.1 Bifidobacteriales Bacteria 2GISN@201174,4CZKR@85004,COG0582@1,COG0582@2 NA|NA|NA L Phage integrase family KDBPDICH_01372 398513.BBNG_00813 6.6e-69 266.5 Bifidobacteriales Bacteria 2C5TS@1,2IT81@201174,2ZX0Y@2,4D1BF@85004 NA|NA|NA KDBPDICH_01373 649639.Bcell_2719 5.5e-23 114.4 Firmicutes Bacteria 1VXQR@1239,2E0GI@1,32W2H@2 NA|NA|NA KDBPDICH_01374 158787.BSCA_1038 1.3e-67 263.1 Bifidobacteriales rlfA Bacteria 28I7P@1,2IJ7E@201174,2Z8AJ@2,4D25B@85004 NA|NA|NA S Protein of unknown function (DUF3800) KDBPDICH_01375 702459.BBPR_0880 3.8e-14 84.0 Bifidobacteriales Bacteria 2BNW4@1,2H5A1@201174,32HJZ@2,4D27T@85004 NA|NA|NA KDBPDICH_01377 702459.BBPR_0882 1.2e-65 256.1 Bifidobacteriales Bacteria 29F22@1,2HDWQ@201174,301ZU@2,4D2IC@85004 NA|NA|NA KDBPDICH_01379 1437609.BCAL_1726 4.5e-20 103.6 Bifidobacteriales Bacteria 2DHZF@1,2HDFZ@201174,301H4@2,4D2KW@85004 NA|NA|NA KDBPDICH_01384 1435051.BMOU_0255 8.1e-65 253.4 Actinobacteria ssb1 ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria 2GMM3@201174,COG0629@1,COG0629@2 NA|NA|NA L single-stranded DNA-binding protein KDBPDICH_01385 1435051.BMOU_0254 4.3e-46 190.7 Bifidobacteriales Bacteria 2BEW9@1,2HEFE@201174,328MX@2,4D2QV@85004 NA|NA|NA KDBPDICH_01386 401473.BDP_0914 1.9e-08 67.0 Bifidobacteriales Bacteria 29W79@1,2IC42@201174,30HSG@2,4CZZM@85004 NA|NA|NA S Helix-turn-helix domain KDBPDICH_01387 1435051.BMOU_0252 2.1e-178 632.1 Bifidobacteriales ko:K03497 ko00000,ko03000,ko03036,ko04812 Bacteria 2I9G6@201174,4D06E@85004,COG1475@1,COG1475@2 NA|NA|NA K ParB-like nuclease domain KDBPDICH_01389 398513.BBNG_00830 5.7e-49 200.3 Bifidobacteriales Bacteria 2GQKB@201174,4D1JQ@85004,COG1403@1,COG1403@2 NA|NA|NA V HNH endonuclease KDBPDICH_01390 566552.BIFCAT_00884 1e-25 123.6 Bifidobacteriales ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 2IM4T@201174,4D15Z@85004,COG1949@1,COG1949@2 NA|NA|NA A 3'-to-5' exoribonuclease specific for small oligoribonucleotides KDBPDICH_01395 398513.BBNG_00833 1.5e-11 75.5 Bifidobacteriales Bacteria 2B46U@1,2GY2T@201174,31WXX@2,4D1ND@85004 NA|NA|NA KDBPDICH_01399 1680.BADO_1257 6e-47 193.7 Bifidobacteriales Bacteria 2BM51@1,2H05H@201174,32FNI@2,4D1SR@85004 NA|NA|NA KDBPDICH_01402 1435051.BMOU_0242 1.9e-19 102.4 Actinobacteria msi109 Bacteria 2GYFI@201174,COG3311@1,COG3311@2 NA|NA|NA K Helix-turn-helix domain KDBPDICH_01403 566552.BIFCAT_00879 3.1e-153 547.7 Bifidobacteriales Bacteria 2GW8Y@201174,4D1FV@85004,COG2023@1,COG2023@2 NA|NA|NA J tRNA 5'-leader removal KDBPDICH_01404 78345.BMERY_0887 2.4e-53 214.5 Bifidobacteriales Bacteria 2IS6G@201174,4D17J@85004,COG1403@1,COG1403@2 NA|NA|NA V HNH nucleases KDBPDICH_01405 1340825.S5YM54_9CAUD 1.6e-13 82.8 Caudovirales Viruses 4QAIU@10239,4QPDE@28883,4QUQC@35237 NA|NA|NA S HNH endonuclease KDBPDICH_01406 566552.BIFCAT_00877 1.1e-29 136.3 Bifidobacteriales Bacteria 2B52Z@1,2IQBY@201174,31XW8@2,4D1CB@85004 NA|NA|NA KDBPDICH_01407 78345.BMERY_0885 1.8e-225 788.5 Bifidobacteriales Bacteria 2IB7D@201174,4CZEW@85004,COG4626@1,COG4626@2 NA|NA|NA S Terminase KDBPDICH_01408 158787.BSCA_1879 5.9e-187 660.6 Bifidobacteriales Bacteria 2C9AC@1,2I2HE@201174,2Z839@2,4CZJA@85004 NA|NA|NA S Phage portal protein, SPP1 Gp6-like KDBPDICH_01409 1688.BCUN_0245 4.7e-98 365.2 Bifidobacteriales Bacteria 2DM1N@1,2IRH6@201174,31BIG@2,4D0UB@85004 NA|NA|NA KDBPDICH_01410 762211.BSTEL_1229 4.5e-09 67.0 Bifidobacteriales Bacteria 29SX4@1,2GWKW@201174,30E3E@2,4D1TK@85004 NA|NA|NA KDBPDICH_01411 158787.BSCA_1876 7.7e-22 110.5 Bifidobacteriales Bacteria 2A7AI@1,2GX3Z@201174,30W77@2,4D1RF@85004 NA|NA|NA KDBPDICH_01412 158787.BSCA_1875 4.4e-126 457.6 Actinobacteria Bacteria 2I9E6@201174,COG4653@1,COG4653@2 NA|NA|NA S Phage capsid family KDBPDICH_01413 78345.BMERY_0878 4.3e-65 253.8 Bifidobacteriales Bacteria 2EEUJ@1,2IRIW@201174,338N2@2,4D1FY@85004 NA|NA|NA S Phage protein Gp19/Gp15/Gp42 KDBPDICH_01414 78345.BMERY_0877 1.5e-44 185.3 Bifidobacteriales Bacteria 2BFP2@1,2IR1Q@201174,329HJ@2,4D19I@85004 NA|NA|NA KDBPDICH_01415 78345.BMERY_0876 4.9e-32 143.3 Bifidobacteriales Bacteria 29W32@1,2GYJB@201174,30HMS@2,4D1SB@85004 NA|NA|NA KDBPDICH_01416 78345.BMERY_0875 2.5e-60 238.0 Bifidobacteriales Bacteria 2B035@1,2GQKR@201174,31SDG@2,4D1FZ@85004 NA|NA|NA KDBPDICH_01417 78345.BMERY_0874 2.6e-109 401.4 Bifidobacteriales Bacteria 29W76@1,2IGT8@201174,30HSD@2,4D0UG@85004 NA|NA|NA KDBPDICH_01418 78345.BMERY_0872 1.1e-62 245.7 Bifidobacteriales Bacteria 2AXW3@1,2IRCA@201174,31PXC@2,4D1CA@85004 NA|NA|NA KDBPDICH_01420 1435051.BMOU_0224 6.5e-97 362.5 Bifidobacteriales Bacteria 2H75F@201174,4CZ35@85004,COG3941@1,COG3941@2,COG5412@1,COG5412@2 NA|NA|NA S phage tail tape measure protein KDBPDICH_01421 78345.BMERY_0869 9.5e-115 419.9 Bifidobacteriales Bacteria 2AN2N@1,2IMN1@201174,31D08@2,4D12N@85004 NA|NA|NA KDBPDICH_01422 78345.BMERY_0868 5.6e-117 428.3 Bifidobacteriales Bacteria 2BPU9@1,2IG69@201174,32IMR@2,4D0RH@85004 NA|NA|NA S Psort location Cytoplasmic, score KDBPDICH_01424 78345.BMERY_0868 4.4e-07 61.6 Bifidobacteriales Bacteria 2BPU9@1,2IG69@201174,32IMR@2,4D0RH@85004 NA|NA|NA S Psort location Cytoplasmic, score KDBPDICH_01426 78345.BMERY_0866 4e-68 265.0 Bifidobacteriales Bacteria 2CA4H@1,2GRNF@201174,3342S@2,4D1E9@85004 NA|NA|NA KDBPDICH_01428 1680.BADO_1228 1.1e-21 109.0 Bifidobacteriales Bacteria 2CA4H@1,2GRNF@201174,3342S@2,4D1E9@85004 NA|NA|NA KDBPDICH_01429 78345.BMERY_0866 1.5e-32 145.2 Bifidobacteriales Bacteria 2CA4H@1,2GRNF@201174,3342S@2,4D1E9@85004 NA|NA|NA KDBPDICH_01430 1680.BADO_1224 9.6e-150 536.2 Bacteria Bacteria COG0582@1,COG0582@2 NA|NA|NA L DNA integration KDBPDICH_01431 566552.BIFCAT_00300 9.1e-18 96.3 Bifidobacteriales Bacteria 2BJPU@1,2GZ2E@201174,32E1F@2,4D1PK@85004 NA|NA|NA KDBPDICH_01432 78345.BMERY_0862 3.2e-194 684.5 Bifidobacteriales ko:K07273 ko00000 Bacteria 2I2GA@201174,4D07F@85004,COG3757@1,COG3757@2 NA|NA|NA M Glycosyl hydrolases family 25 KDBPDICH_01433 1680.BADO_1216 4.5e-28 130.2 Bifidobacteriales Bacteria 2EK5K@1,2GSM4@201174,33DW0@2,4D1J2@85004 NA|NA|NA S Putative phage holin Dp-1 KDBPDICH_01434 547043.BIFPSEUDO_03494 2.1e-252 877.9 Bifidobacteriales aroA GO:0003674,GO:0003824,GO:0003866,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:0071944,GO:1901576 2.5.1.19 ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03460 RC00350 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJKX@201174,4CZBG@85004,COG0128@1,COG0128@2 NA|NA|NA E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate KDBPDICH_01435 547043.BIFPSEUDO_03499 2.9e-70 271.2 Bifidobacteriales yvbK 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 2IPKP@201174,4D2TY@85004,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain KDBPDICH_01436 547043.BIFPSEUDO_03500 5.8e-76 290.0 Bifidobacteriales yiaC ko:K03826 ko00000,ko01000 Bacteria 2GUUC@201174,4D1I5@85004,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain KDBPDICH_01437 547043.BIFPSEUDO_03510 1.5e-302 1044.6 Bifidobacteriales guaA GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 iJN746.PP_1032,iLJ478.TM1820,iSF_1195.SF2553,iSFxv_1172.SFxv_2808,iS_1188.S2725,iYL1228.KPN_02833 Bacteria 2GM09@201174,4CZC3@85004,COG0518@1,COG0518@2,COG0519@1,COG0519@2 NA|NA|NA F Catalyzes the synthesis of GMP from XMP KDBPDICH_01438 547043.BIFPSEUDO_03513 0.0 1704.1 Bifidobacteriales xfp GO:0003674,GO:0003824,GO:0008150,GO:0009758 4.1.2.22,4.1.2.9 ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 R00761,R01621 RC00032,RC00226 ko00000,ko00001,ko01000 Bacteria 2GN27@201174,4CZT5@85004,COG3957@1,COG3957@2 NA|NA|NA G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase KDBPDICH_01439 547043.BIFPSEUDO_03514 1e-301 1042.0 Bifidobacteriales pta GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0006082,GO:0006083,GO:0006950,GO:0008150,GO:0008152,GO:0008959,GO:0009058,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016053,GO:0016407,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0016999,GO:0017000,GO:0017144,GO:0019413,GO:0019752,GO:0030145,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0046914,GO:0050182,GO:0050896,GO:0055114,GO:0071704,GO:0072330,GO:1901576 1.1.1.40,2.3.1.19,2.3.1.8,3.6.3.21 ko:K00029,ko:K00625,ko:K00634,ko:K02028,ko:K04020,ko:K13788 ko00430,ko00620,ko00640,ko00650,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00650,map00680,map00710,map00720,map01100,map01120,map01200 M00169,M00172,M00236,M00357,M00579 R00216,R00230,R00921,R01174 RC00004,RC00105,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3 iAF987.Gmet_1035,iAF987.Gmet_1637,iAF987.Gmet_2098,iE2348C_1286.E2348C_2692,iSB619.SA_RS03155,iYO844.BSU24090 Bacteria 2GJ5U@201174,4CZE6@85004,COG0280@1,COG0280@2 NA|NA|NA C phosphate acetyltransferase KDBPDICH_01440 547043.BIFPSEUDO_03515 1.7e-232 811.6 Bifidobacteriales ackA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006083,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016053,GO:0016999,GO:0017000,GO:0017144,GO:0019413,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.7.2.1,2.7.2.15 ko:K00925,ko:K19697 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1034,iIT341.HP0903m,iNJ661.Rv0409 Bacteria 2GJAW@201174,4CZ7V@85004,COG0282@1,COG0282@2 NA|NA|NA H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction KDBPDICH_01441 547043.BIFPSEUDO_03516 0.0 1226.8 Bifidobacteriales yrhL Bacteria 2GKI5@201174,4D0BY@85004,COG1835@1,COG1835@2 NA|NA|NA I Psort location CytoplasmicMembrane, score 9.99 KDBPDICH_01442 547043.BIFPSEUDO_03517 4.7e-244 850.1 Bifidobacteriales pbuX ko:K03458 ko00000 2.A.40 Bacteria 2GMH6@201174,4CZ9F@85004,COG2233@1,COG2233@2 NA|NA|NA F Permease family KDBPDICH_01443 547043.BIFPSEUDO_03518 1.5e-106 392.1 Bifidobacteriales xpt 2.4.2.22,2.4.2.7 ko:K00759,ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 R00190,R01229,R02142,R04378 RC00063,RC00122 ko00000,ko00001,ko01000,ko04147 Bacteria 2GJ3S@201174,4CYSZ@85004,COG0503@1,COG0503@2 NA|NA|NA F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis KDBPDICH_01444 547043.BIFPSEUDO_03519 0.0 1527.7 Bifidobacteriales pcrA GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 2GISS@201174,4CYRJ@85004,COG0210@1,COG0210@2 NA|NA|NA L DNA helicase KDBPDICH_01445 547043.BIFPSEUDO_03520 1.4e-60 238.8 Bifidobacteriales Bacteria 2CBVU@1,2IKKE@201174,3324G@2,4D106@85004 NA|NA|NA S Domain of unknown function (DUF4418) KDBPDICH_01446 547043.BIFPSEUDO_03521 4.8e-216 756.9 Bifidobacteriales ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2H8C2@201174,4CZB5@85004,COG0577@1,COG0577@2 NA|NA|NA V FtsX-like permease family KDBPDICH_01447 547043.BIFPSEUDO_03522 5.4e-150 537.0 Bifidobacteriales lolD ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2IATV@201174,4CZMH@85004,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter KDBPDICH_01448 547043.BIFPSEUDO_03523 3.1e-110 404.4 Bifidobacteriales rpsD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 ko:K02986 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GIRX@201174,4CYSP@85004,COG0522@1,COG0522@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit KDBPDICH_01449 566552.BIFCAT_00976 3.4e-51 207.6 Bifidobacteriales yvlD ko:K08972 ko00000 Bacteria 2HZND@201174,4D117@85004,COG1950@1,COG1950@2 NA|NA|NA S Mycobacterial 4 TMS phage holin, superfamily IV KDBPDICH_01450 547043.BIFPSEUDO_03525 5.6e-129 466.8 Bifidobacteriales pgm3 Bacteria 2GK2I@201174,4CZH2@85004,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family KDBPDICH_01451 547043.BIFPSEUDO_03526 3.4e-59 234.2 Bifidobacteriales WQ51_05790 Bacteria 2II1J@201174,4D0VH@85004,COG4768@1,COG4768@2 NA|NA|NA S Bacterial protein of unknown function (DUF948) KDBPDICH_01452 547043.BIFPSEUDO_03527 2.5e-36 157.5 Bifidobacteriales Bacteria 2B9VR@1,2IQYT@201174,3238X@2,4D16I@85004 NA|NA|NA KDBPDICH_01453 547043.BIFPSEUDO_03528 0.0 1751.9 Bifidobacteriales alaS GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GIUG@201174,4CZQN@85004,COG0013@1,COG0013@2 NA|NA|NA J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain KDBPDICH_01454 547043.BIFPSEUDO_03529 2.7e-82 311.2 Bifidobacteriales yqgF GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 ko:K07447 ko00000,ko01000 Bacteria 2IQB0@201174,4D0WQ@85004,COG0816@1,COG0816@2 NA|NA|NA L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA KDBPDICH_01455 547043.BIFPSEUDO_03530 8.9e-191 672.9 Bifidobacteriales mltG ko:K07082 ko00000 Bacteria 2GKGQ@201174,4CZID@85004,COG1559@1,COG1559@2 NA|NA|NA S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation KDBPDICH_01456 547043.BIFPSEUDO_03531 9.3e-57 226.5 Bifidobacteriales 3.4.23.43 ko:K02654 M00331 ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 3.A.15.2 Bacteria 2B59B@1,2GRM1@201174,31Y3G@2,4D110@85004 NA|NA|NA S Type IV leader peptidase family KDBPDICH_01457 547043.BIFPSEUDO_03532 2.2e-221 774.6 Bifidobacteriales aroC GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016491,GO:0016651,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01714 RC00586 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_0976,iNJ661.Rv2540c Bacteria 2GJJN@201174,4CZ43@85004,COG0082@1,COG0082@2 NA|NA|NA E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system KDBPDICH_01458 547043.BIFPSEUDO_03533 0.0 1085.5 Bifidobacteriales aroK GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003856,GO:0004765,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016835,GO:0016838,GO:0017076,GO:0019438,GO:0019632,GO:0019752,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71,4.2.3.4 ko:K00891,ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412,R03083 RC00002,RC00078,RC00847 ko00000,ko00001,ko00002,ko01000 Bacteria 2GIUZ@201174,4CZ2G@85004,COG0337@1,COG0337@2,COG0703@1,COG0703@2 NA|NA|NA H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) KDBPDICH_01459 547043.BIFPSEUDO_03534 4.9e-81 307.0 Bifidobacteriales aroQ GO:0003674,GO:0003824,GO:0003855,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:1901576 4.2.1.10 ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03084 RC00848 ko00000,ko00001,ko00002,ko01000 iIT341.HP1038 Bacteria 2IMBY@201174,4D0Q6@85004,COG0757@1,COG0757@2 NA|NA|NA E Catalyzes a trans-dehydration via an enolate intermediate KDBPDICH_01460 547043.BIFPSEUDO_03536 0.0 3476.4 Bifidobacteriales pulA 3.2.1.1,3.2.1.41 ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 R02108,R02111,R02112,R11262 ko00000,ko00001,ko01000 CBM48,GH13 Bacteria 2GKK1@201174,4D2UY@85004,COG0366@1,COG0366@2,COG1523@1,COG1523@2 NA|NA|NA M Aamy_C KDBPDICH_01461 547043.BIFPSEUDO_03538 0.0 1118.2 Bifidobacteriales pyrG GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1276,iECO103_1326.ECO103_3323,iHN637.CLJU_RS01075,iNJ661.Rv1699,iPC815.YPO3377 Bacteria 2GJ13@201174,4CYWE@85004,COG0504@1,COG0504@2 NA|NA|NA F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates KDBPDICH_01462 547043.BIFPSEUDO_03539 0.0 1114.0 Bifidobacteriales Bacteria 2GQ7D@201174,4CZ5A@85004,COG1376@1,COG1376@2 NA|NA|NA S L,D-transpeptidase catalytic domain KDBPDICH_01463 566552.BIFCAT_00962 9.6e-291 1005.4 Bifidobacteriales sufB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 ko:K07033,ko:K09014 ko00000 Bacteria 2GKCZ@201174,4CZPQ@85004,COG0719@1,COG0719@2 NA|NA|NA O FeS assembly protein SufB KDBPDICH_01464 547043.BIFPSEUDO_03541 2.3e-234 817.8 Bifidobacteriales sufD GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0040007,GO:0043207,GO:0044085,GO:0044237,GO:0044403,GO:0044419,GO:0050896,GO:0051186,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071840,GO:0075136 ko:K09015 ko00000 iB21_1397.B21_01640,iECBD_1354.ECBD_1964,iECB_1328.ECB_01650,iECD_1391.ECD_01650,iUMNK88_1353.UMNK88_2144 Bacteria 2GJNV@201174,4CZEE@85004,COG0719@1,COG0719@2 NA|NA|NA O FeS assembly protein SufD KDBPDICH_01465 547043.BIFPSEUDO_03542 1e-142 512.7 Bifidobacteriales sufC ko:K09013 ko00000,ko02000 Bacteria 2GKB7@201174,4CZU1@85004,COG0396@1,COG0396@2 NA|NA|NA O FeS assembly ATPase SufC KDBPDICH_01466 547043.BIFPSEUDO_03543 2.2e-240 837.8 Bifidobacteriales sufS GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 2.8.1.7,4.4.1.16 ko:K11717 ko00450,ko01100,map00450,map01100 R03599,R11528 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000 Bacteria 2GIVK@201174,4CZIU@85004,COG0520@1,COG0520@2 NA|NA|NA E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine KDBPDICH_01467 547043.BIFPSEUDO_03544 2.6e-97 361.3 Bifidobacteriales iscU ko:K04488 ko00000 Bacteria 2IHY9@201174,4CZU5@85004,COG0822@1,COG0822@2 NA|NA|NA C SUF system FeS assembly protein, NifU family KDBPDICH_01468 547043.BIFPSEUDO_03546 2.7e-108 397.9 Bifidobacteriales yitW ko:K02612 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001 Bacteria 2IKUH@201174,4CYRH@85004,COG2151@1,COG2151@2 NA|NA|NA S Iron-sulfur cluster assembly protein KDBPDICH_01469 547043.BIFPSEUDO_03547 8.1e-243 845.9 Bifidobacteriales glgC GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008878,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0070566,GO:0071704,GO:1901576 2.7.7.27 ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 M00565 R00948 RC00002 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2768 Bacteria 2I2EF@201174,4CZ4E@85004,COG0448@1,COG0448@2 NA|NA|NA H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans KDBPDICH_01470 547043.BIFPSEUDO_03548 3e-162 577.8 Bifidobacteriales spoU 2.1.1.185 ko:K03218,ko:K03437 ko00000,ko01000,ko03009,ko03016 Bacteria 2GJ12@201174,4CYQ6@85004,COG0566@1,COG0566@2 NA|NA|NA J SpoU rRNA Methylase family KDBPDICH_01472 547043.BIFPSEUDO_03550 5.9e-138 496.9 Bifidobacteriales rsmE 2.1.1.193 ko:K09761 ko00000,ko01000,ko03009 Bacteria 2GTKX@201174,4CZAD@85004,COG1385@1,COG1385@2 NA|NA|NA J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit KDBPDICH_01473 547043.BIFPSEUDO_03551 2e-55 221.5 Bifidobacteriales hinT GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019478,GO:0019752,GO:0043436,GO:0043530,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055130,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.1.226,2.1.1.227 ko:K02503,ko:K06442 ko00000,ko01000,ko03009,ko04147 Bacteria 2IHPT@201174,4D130@85004,COG0537@1,COG0537@2 NA|NA|NA FG Scavenger mRNA decapping enzyme C-term binding KDBPDICH_01474 547043.BIFPSEUDO_03552 5.9e-208 729.9 Bifidobacteriales phoH GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K06217 ko00000 Bacteria 2GK0W@201174,4CZJH@85004,COG1702@1,COG1702@2 NA|NA|NA T PhoH-like protein KDBPDICH_01475 547043.BIFPSEUDO_03553 9.4e-103 379.4 Bifidobacteriales ybeY GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.6.99.2,3.5.4.5 ko:K01489,ko:K03474,ko:K03595,ko:K07042 ko00240,ko00750,ko00983,ko01100,map00240,map00750,map00983,map01100 M00124 R01878,R02485,R05838,R08221 RC00074,RC00514,RC01476 ko00000,ko00001,ko00002,ko01000,ko03009,ko03029 Bacteria 2GMUF@201174,4CZJF@85004,COG0319@1,COG0319@2 NA|NA|NA S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA KDBPDICH_01476 547043.BIFPSEUDO_03554 4.1e-251 873.6 Bifidobacteriales corC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 2GIWR@201174,4CZ1W@85004,COG1253@1,COG1253@2 NA|NA|NA S CBS domain KDBPDICH_01477 566552.BIFCAT_00948 2e-180 638.3 Bifidobacteriales era GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043021,GO:0043024,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070181,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:1901363 ko:K03595 ko00000,ko03009,ko03029 Bacteria 2GJJE@201174,4CYZH@85004,COG1159@1,COG1159@2 NA|NA|NA S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism KDBPDICH_01478 547043.BIFPSEUDO_03556 0.0 1352.0 Bifidobacteriales fadD 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 Bacteria 2GIXQ@201174,4CYYJ@85004,COG1022@1,COG1022@2 NA|NA|NA I AMP-binding enzyme KDBPDICH_01479 547043.BIFPSEUDO_03557 2.2e-202 711.4 Bifidobacteriales pntA 1.6.1.2 ko:K00324 ko00760,ko01100,map00760,map01100 R00112 RC00001 ko00000,ko00001,ko01000 Bacteria 2I2FZ@201174,4CZZ3@85004,COG3288@1,COG3288@2 NA|NA|NA C NAD(P) transhydrogenase subunit alpha part 1 K00324 KDBPDICH_01480 1435051.BMOU_0956 2.7e-43 181.0 Bifidobacteriales pntAA 1.6.1.2 ko:K00324 ko00760,ko01100,map00760,map01100 R00112 RC00001 ko00000,ko00001,ko01000 Bacteria 2IKR9@201174,4D12D@85004,COG3288@1,COG3288@2 NA|NA|NA C 4TM region of pyridine nucleotide transhydrogenase, mitoch KDBPDICH_01481 547043.BIFPSEUDO_03559 3.5e-258 897.1 Bifidobacteriales pntB 1.6.1.2 ko:K00325 ko00760,ko01100,map00760,map01100 R00112 RC00001 ko00000,ko00001,ko01000 Bacteria 2GNKB@201174,4CZF5@85004,COG1282@1,COG1282@2 NA|NA|NA C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane KDBPDICH_01482 547043.BIFPSEUDO_03561 9.4e-269 932.2 Bifidobacteriales Bacteria 2ANBU@1,2IAHJ@201174,31DA7@2,4CYW4@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_01484 547043.BIFPSEUDO_03563 6.6e-224 783.1 Bifidobacteriales Bacteria 2HZ9S@201174,4CZ4Z@85004,COG2271@1,COG2271@2 NA|NA|NA G Transmembrane secretion effector KDBPDICH_01485 547043.BIFPSEUDO_03564 2.7e-120 438.0 Bifidobacteriales Bacteria 2HZJX@201174,4D0QJ@85004,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family KDBPDICH_01486 566552.BIFCAT_00936 1.1e-39 168.7 Bifidobacteriales nrdH ko:K06191 ko00000 Bacteria 2IRCP@201174,4D17U@85004,COG0695@1,COG0695@2 NA|NA|NA O Glutaredoxin KDBPDICH_01487 566552.BIFCAT_00935 3.3e-74 284.3 Bifidobacteriales nrdI ko:K03647 ko00000 Bacteria 2IM4D@201174,4D0XV@85004,COG1780@1,COG1780@2 NA|NA|NA F Probably involved in ribonucleotide reductase function KDBPDICH_01488 547043.BIFPSEUDO_03568 0.0 1462.6 Bifidobacteriales nrdE GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0015949,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 iAPECO1_1312.APECO1_3846,iYO844.BSU17380 Bacteria 2GKX9@201174,4CZF3@85004,COG0209@1,COG0209@2 NA|NA|NA F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides KDBPDICH_01490 547043.BIFPSEUDO_03569 2.4e-189 667.9 Bifidobacteriales nrdF GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0018130,GO:0019438,GO:0019637,GO:0030145,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0090304,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 iECNA114_1301.ECNA114_2708,iECSF_1327.ECSF_2473,iSFV_1184.SFV_2827,iSF_1195.SF2704,iSFxv_1172.SFxv_2966,iS_1188.S2890 Bacteria 2GK46@201174,4CYQ2@85004,COG0208@1,COG0208@2 NA|NA|NA F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides KDBPDICH_01491 566552.BIFCAT_00932 0.0 1371.7 Bifidobacteriales uvrA3 ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 2GNMW@201174,4CZ5X@85004,COG0178@1,COG0178@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate KDBPDICH_01492 547043.BIFPSEUDO_03573 2.6e-30 137.5 Bacteria ko:K08177,ko:K19577 ko00000,ko02000 2.A.1.11,2.A.1.2.65 Bacteria COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_01493 547043.BIFPSEUDO_03574 1.1e-24 118.6 Bacteria yhjX ko:K08177 ko00000,ko02000 2.A.1.11 Bacteria COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_01494 547043.BIFPSEUDO_03575 3.8e-195 687.2 Bifidobacteriales ko:K06889 ko00000 Bacteria 2HZEB@201174,4D02D@85004,COG1073@1,COG1073@2 NA|NA|NA S alpha beta KDBPDICH_01495 547043.BIFPSEUDO_03576 1e-89 336.3 Bifidobacteriales ctc GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02897 ko03010,map03010 M00178 ko00000,ko00001,ko00002,ko03011 Bacteria 2GJPJ@201174,4CZ7W@85004,COG1825@1,COG1825@2 NA|NA|NA J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance KDBPDICH_01496 547043.BIFPSEUDO_03578 4.1e-92 344.0 Bifidobacteriales ko:K06199 ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 Bacteria 2IJGQ@201174,4D11I@85004,COG0239@1,COG0239@2 NA|NA|NA D Important for reducing fluoride concentration in the cell, thus reducing its toxicity KDBPDICH_01497 547043.BIFPSEUDO_03579 3.2e-54 217.6 Bifidobacteriales crcB GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 ko:K06199 ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 Bacteria 2IC26@201174,4D14T@85004,COG0239@1,COG0239@2 NA|NA|NA U Important for reducing fluoride concentration in the cell, thus reducing its toxicity KDBPDICH_01498 547043.BIFPSEUDO_03580 9.1e-74 282.7 Bifidobacteriales Bacteria 2I2G2@201174,4D0RY@85004,COG0454@1,COG0454@2 NA|NA|NA K Acetyltransferase (GNAT) domain KDBPDICH_01500 547043.BIFPSEUDO_03582 1.9e-227 794.7 Bifidobacteriales ilvE GO:0000082,GO:0000278,GO:0003674,GO:0003824,GO:0004084,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006573,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008283,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009081,GO:0009082,GO:0009083,GO:0009098,GO:0009099,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0022402,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607,GO:1903047 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 2GKJ1@201174,4CZD9@85004,COG0115@1,COG0115@2 NA|NA|NA E Amino-transferase class IV KDBPDICH_01501 547043.BIFPSEUDO_03584 1.1e-133 482.6 Bifidobacteriales GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 2GMI4@201174,4CZ51@85004,COG2860@1,COG2860@2 NA|NA|NA S UPF0126 domain KDBPDICH_01502 547043.BIFPSEUDO_03585 2.9e-33 147.5 Bifidobacteriales rpsT GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02968 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IQ73@201174,4D18U@85004,COG0268@1,COG0268@2 NA|NA|NA J Binds directly to 16S ribosomal RNA KDBPDICH_01503 547043.BIFPSEUDO_03586 0.0 1239.2 Bifidobacteriales lepA GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 ko:K03596 ko05134,map05134 ko00000,ko00001 Bacteria 2GJAB@201174,4CYWI@85004,COG0481@1,COG0481@2 NA|NA|NA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner KDBPDICH_01504 547043.BIFPSEUDO_03588 3e-234 817.4 Bifidobacteriales hemN GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 iNJ661.Rv2388c Bacteria 2GJXX@201174,4CZ81@85004,COG0635@1,COG0635@2 NA|NA|NA H Involved in the biosynthesis of porphyrin-containing compound KDBPDICH_01505 547043.BIFPSEUDO_03589 5e-145 520.4 Bifidobacteriales Bacteria 2GIX2@201174,4D0FH@85004,COG1028@1,COG1028@2 NA|NA|NA IQ Oxidoreductase, short chain dehydrogenase reductase family protein KDBPDICH_01506 547043.BIFPSEUDO_03590 4.5e-288 996.5 Bifidobacteriales luxC 1.2.1.50 ko:K03400 ko02020,ko02024,map02020,map02024 R10549 RC00004,RC00184 ko00000,ko00001,ko01000 Bacteria 2HZAQ@201174,4CZDA@85004,COG1012@1,COG1012@2 NA|NA|NA C Acyl-CoA reductase (LuxC) KDBPDICH_01507 547043.BIFPSEUDO_03591 2.1e-218 764.6 Bifidobacteriales luxE 6.2.1.19 ko:K06046 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko01000 Bacteria 2HZHX@201174,4D0HV@85004,COG1541@1,COG1541@2 NA|NA|NA H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase KDBPDICH_01508 547043.BIFPSEUDO_03592 3.2e-251 874.0 Bifidobacteriales ko:K03458 ko00000 2.A.40 Bacteria 2GV9H@201174,4CZYX@85004,COG2233@1,COG2233@2 NA|NA|NA F Psort location CytoplasmicMembrane, score 10.00 KDBPDICH_01509 547043.BIFPSEUDO_03593 0.0 3133.2 Bifidobacteriales gltB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1 ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 R00021,R00093,R00114,R00248,R10086 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 Bacteria 2GN09@201174,4CZB8@85004,COG0067@1,COG0067@2,COG0069@1,COG0069@2,COG0070@1,COG0070@2 NA|NA|NA E glutamate synthase NADPH large subunit KDBPDICH_01510 547043.BIFPSEUDO_03594 2.6e-307 1060.4 Bifidobacteriales gltD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 iJN678.gltD,iNJ661.Rv3858c,iSB619.SA_RS02450 Bacteria 2GJ0A@201174,4CZ7B@85004,COG0493@1,COG0493@2 NA|NA|NA C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KDBPDICH_01511 401473.BDP_1080 2e-74 285.0 Bifidobacteriales Bacteria 2BI32@1,2IDD6@201174,32C84@2,4D0PC@85004 NA|NA|NA KDBPDICH_01512 547043.BIFPSEUDO_03596 7.6e-249 865.9 Bifidobacteriales glgA GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901576 2.4.1.342 ko:K16148 ko00500,ko01100,map00500,map01100 R02421,R11530 RC00005,RC00049,RC02748 ko00000,ko00001,ko01000,ko01003 GT4 Bacteria 2I2EE@201174,4CZKY@85004,COG0297@1,COG0297@2 NA|NA|NA G Starch synthase catalytic domain KDBPDICH_01513 547043.BIFPSEUDO_03598 1.9e-158 565.1 Bifidobacteriales modF GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.6.3.21,3.6.3.34 ko:K02013,ko:K02028,ko:K05776 ko02010,map02010 M00189,M00236,M00240 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14,3.A.1.3 Bacteria 2GIXX@201174,4CZDS@85004,COG1119@1,COG1119@2 NA|NA|NA P ATPases associated with a variety of cellular activities KDBPDICH_01514 547043.BIFPSEUDO_03599 3.9e-198 697.2 Bifidobacteriales trmI GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0031515,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.219,2.1.1.220 ko:K07442 ko00000,ko01000,ko03016 Bacteria 2GJPD@201174,4CYUG@85004,COG2519@1,COG2519@2 NA|NA|NA J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA KDBPDICH_01515 547043.BIFPSEUDO_03600 4.5e-100 370.5 Bifidobacteriales sixA 3.6.1.55 ko:K03574,ko:K08296 ko00000,ko01000,ko03400 Bacteria 2GJ0I@201174,4D05N@85004,COG2062@1,COG2062@2 NA|NA|NA T Phosphoglycerate mutase family KDBPDICH_01516 547043.BIFPSEUDO_03601 0.0 1536.5 Bifidobacteriales metE GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0030312,GO:0032259,GO:0034641,GO:0035999,GO:0036211,GO:0040007,GO:0042084,GO:0042085,GO:0042558,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0050667,GO:0051186,GO:0071704,GO:0071944,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R04405,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_4130,iECO103_1326.ECO103_4334,iECO111_1330.ECO111_4657,iECO26_1355.ECO26_4756,iECW_1372.ECW_m4131,iEKO11_1354.EKO11_4528,iPC815.YPO3788,iWFL_1372.ECW_m4131 Bacteria 2GIXA@201174,4CYWM@85004,COG0620@1,COG0620@2 NA|NA|NA E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation KDBPDICH_01517 547043.BIFPSEUDO_03602 1.6e-157 562.0 Bifidobacteriales metF GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 ko:K00297,ko:K21010 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,ko02025,map00670,map00720,map01100,map01120,map01200,map01523,map02025 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 iPC815.YPO0117,iSBO_1134.SBO_3961 Bacteria 2GJTN@201174,4CZ22@85004,COG0685@1,COG0685@2 NA|NA|NA E Methylenetetrahydrofolate reductase KDBPDICH_01518 566552.BIFCAT_00848 0.0 1999.2 Bifidobacteriales glnE GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 2.7.7.42,2.7.7.89 ko:K00982 ko00000,ko01000 Bacteria 2GJ91@201174,4CYQE@85004,COG1391@1,COG1391@2 NA|NA|NA H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell KDBPDICH_01519 547043.BIFPSEUDO_03604 3e-187 661.0 Bifidobacteriales pyrB GO:0003674,GO:0003824,GO:0004070,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 iZ_1308.Z5856 Bacteria 2GKNA@201174,4CYZR@85004,COG0540@1,COG0540@2 NA|NA|NA F Belongs to the ATCase OTCase family KDBPDICH_01520 547043.BIFPSEUDO_03605 4.2e-74 283.9 Bifidobacteriales pyrI GO:0003674,GO:0003824,GO:0004070,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 ko:K00608,ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 Bacteria 2IFDF@201174,4D0QN@85004,COG1781@1,COG1781@2 NA|NA|NA F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein KDBPDICH_01521 547043.BIFPSEUDO_03606 2e-277 961.1 Bifidobacteriales pyrC GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ0T@201174,4CZIW@85004,COG0044@1,COG0044@2 NA|NA|NA F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily KDBPDICH_01522 547043.BIFPSEUDO_03607 7e-178 629.8 Bifidobacteriales pyrF GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10,4.1.1.23 ko:K01591,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS17585 Bacteria 2GKWK@201174,4CZAK@85004,COG0284@1,COG0284@2 NA|NA|NA F Belongs to the OMP decarboxylase family. Type 2 subfamily KDBPDICH_01523 547043.BIFPSEUDO_03608 9.3e-155 552.7 Bifidobacteriales pyrK 1.18.1.2,1.19.1.1,1.4.1.13,1.4.1.14 ko:K00266,ko:K00528,ko:K02823 ko00240,ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00910,map01100,map01110,map01120,map01130,map01230 R00093,R00114,R00248,R10159 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 Bacteria 2HQ24@201174,4CZC1@85004,COG0543@1,COG0543@2 NA|NA|NA C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KDBPDICH_01524 547043.BIFPSEUDO_03609 6.6e-179 633.3 Bifidobacteriales pyrD 1.3.1.14,1.3.98.1 ko:K00226,ko:K02823,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKC6@201174,4CYU2@85004,COG0167@1,COG0167@2 NA|NA|NA F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily KDBPDICH_01525 547043.BIFPSEUDO_03610 5.5e-124 450.3 Bifidobacteriales pyrE 2.4.2.10 ko:K00762 ko00240,ko01100,map00240,map01100 M00051 R01870 RC00611 ko00000,ko00001,ko00002,ko01000 Bacteria 2GM5A@201174,4CZHB@85004,COG0461@1,COG0461@2 NA|NA|NA F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) KDBPDICH_01526 547043.BIFPSEUDO_03611 2.9e-162 577.8 Bifidobacteriales cpsY Bacteria 2HZCU@201174,4CZT8@85004,COG0583@1,COG0583@2 NA|NA|NA K Bacterial regulatory helix-turn-helix protein, lysR family KDBPDICH_01527 547043.BIFPSEUDO_03613 0.0 1763.8 Bifidobacteriales thiC GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0040007,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3,2.7.1.49,2.7.4.7,4.1.99.17 ko:K00788,ko:K03147,ko:K14153 ko00730,ko01100,map00730,map01100 M00127 R03223,R03471,R03472,R04509,R10712 RC00002,RC00017,RC00224,RC03251,RC03252,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 iYO844.BSU08790,iYO844.BSU38290 Bacteria 2GJ3Y@201174,4D2W5@85004,COG0352@1,COG0352@2,COG0422@1,COG0422@2 NA|NA|NA H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction KDBPDICH_01529 547043.BIFPSEUDO_03614 8.8e-109 399.4 Bifidobacteriales Bacteria 2HZBU@201174,4CZN2@85004,COG1670@1,COG1670@2 NA|NA|NA J Acetyltransferase (GNAT) domain KDBPDICH_01530 547043.BIFPSEUDO_03615 6.1e-69 266.5 Bifidobacteriales arsC 1.20.4.1 ko:K03741 ko00000,ko01000 Bacteria 2IHR3@201174,4D1A6@85004,COG0394@1,COG0394@2 NA|NA|NA T Belongs to the low molecular weight phosphotyrosine protein phosphatase family KDBPDICH_01531 547043.BIFPSEUDO_03616 5.1e-220 770.0 Bifidobacteriales yxjG_1 Bacteria 2I9RI@201174,4CZKN@85004,COG0620@1,COG0620@2 NA|NA|NA E Psort location Cytoplasmic, score 8.87 KDBPDICH_01532 547043.BIFPSEUDO_03617 6.1e-122 443.4 Bifidobacteriales maa 2.3.1.18,2.3.1.79 ko:K00633,ko:K00661 ko00000,ko01000 Bacteria 2GNUB@201174,4CZ5H@85004,COG0110@1,COG0110@2 NA|NA|NA S Maltose acetyltransferase KDBPDICH_01533 547043.BIFPSEUDO_03618 1.8e-50 204.9 Bifidobacteriales sdpR GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 ko:K03892 ko00000,ko03000 Bacteria 2IM1K@201174,4D14N@85004,COG0640@1,COG0640@2 NA|NA|NA K helix_turn_helix, Arsenical Resistance Operon Repressor KDBPDICH_01534 547043.BIFPSEUDO_03619 1.4e-139 502.3 Bifidobacteriales Bacteria 2ID8C@201174,4D18Z@85004,COG5658@1,COG5658@2 NA|NA|NA S SdpI/YhfL protein family KDBPDICH_01535 547043.BIFPSEUDO_03620 2.1e-109 401.7 Bifidobacteriales 3.8.1.2 ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 R05287 RC00697 ko00000,ko00001,ko01000 Bacteria 2I8XE@201174,4D00B@85004,COG1011@1,COG1011@2 NA|NA|NA S Haloacid dehalogenase-like hydrolase KDBPDICH_01536 547043.BIFPSEUDO_03621 0.0 1141.7 Bifidobacteriales nnrD GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0052855,GO:0052856,GO:0052857 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 ko00000,ko01000 Bacteria 2GJHB@201174,4CZC5@85004,COG0062@1,COG0062@2,COG0063@1,COG0063@2 NA|NA|NA H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration KDBPDICH_01537 547043.BIFPSEUDO_03622 5e-125 453.8 Bifidobacteriales XK27_06785 ko:K02003,ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GJQV@201174,4CYT2@85004,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter KDBPDICH_01538 1437600.JDUI01000024_gene1209 1.6e-56 225.3 Bifidobacteriales Bacteria 2I8Z0@201174,4D0BU@85004,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain KDBPDICH_01539 1437600.JDUI01000015_gene1075 0.0 1366.7 Bifidobacteriales 3.2.1.8 ko:K01181 ko00000,ko01000 Bacteria 2GJSN@201174,4D1WW@85004,COG3693@1,COG3693@2 NA|NA|NA G Glycosyl hydrolase family 10 KDBPDICH_01540 1437600.JDUI01000015_gene1076 2.1e-229 801.2 Bifidobacteriales 3.2.1.156 ko:K15531 ko00000,ko01000 GH8 Bacteria 2IA68@201174,4CZYP@85004,COG3405@1,COG3405@2 NA|NA|NA G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238 KDBPDICH_01541 1437610.BREU_1639 0.0 1492.6 Bifidobacteriales Bacteria 2I94Q@201174,4D1VW@85004,COG1331@1,COG1331@2 NA|NA|NA O Highly conserved protein containing a thioredoxin domain KDBPDICH_01542 1437610.BREU_1640 0.0 1159.4 Bifidobacteriales xynB 3.2.1.37 ko:K01198 ko00520,ko01100,map00520,map01100 R01433 RC00467 ko00000,ko00001,ko01000 GH43 Bacteria 2GIW3@201174,4CZ5I@85004,COG3507@1,COG3507@2 NA|NA|NA G Belongs to the glycosyl hydrolase 43 family KDBPDICH_01543 1437610.BREU_1641 0.0 1424.1 Bifidobacteriales Bacteria 2HT29@201174,4CZ28@85004,COG1653@1,COG1653@2 NA|NA|NA G Psort location Cytoplasmic, score 8.87 KDBPDICH_01544 1437610.BREU_1642 1.6e-149 535.4 Bifidobacteriales ko:K10119,ko:K17328 ko02010,map02010 M00196,M00619 ko00000,ko00001,ko00002,ko02000 3.A.1.1.21,3.A.1.1.28 Bacteria 2GM2W@201174,4D0U9@85004,COG0395@1,COG0395@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_01545 547043.BIFPSEUDO_02497 2.6e-172 611.3 Bifidobacteriales ko:K02025,ko:K10118,ko:K15771,ko:K17327 ko02010,map02010 M00196,M00207,M00491,M00619 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.21,3.A.1.1.28 Bacteria 2GJ32@201174,4D0SM@85004,COG1175@1,COG1175@2 NA|NA|NA U Binding-protein-dependent transport system inner membrane component KDBPDICH_01546 1437610.BREU_1644 9e-169 599.4 Bifidobacteriales ko:K10117,ko:K17326 ko02010,map02010 M00196,M00619 ko00000,ko00001,ko00002,ko02000 3.A.1.1.21,3.A.1.1.28 Bacteria 2GP9H@201174,4D01H@85004,COG1653@1,COG1653@2 NA|NA|NA G ABC transporter periplasmic binding protein YcjN precursor K02027 KDBPDICH_01547 1437610.BREU_1644 1.3e-54 218.8 Bifidobacteriales ko:K10117,ko:K17326 ko02010,map02010 M00196,M00619 ko00000,ko00001,ko00002,ko02000 3.A.1.1.21,3.A.1.1.28 Bacteria 2GP9H@201174,4D01H@85004,COG1653@1,COG1653@2 NA|NA|NA G ABC transporter periplasmic binding protein YcjN precursor K02027 KDBPDICH_01548 547043.BIFPSEUDO_02499 9.7e-103 379.4 Bifidobacteriales ribD GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 1.1.1.193,3.5.4.26 ko:K01498,ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1624,iLJ478.TM1828 Bacteria 2IFMN@201174,4D0JA@85004,COG0117@1,COG0117@2 NA|NA|NA H Cytidine and deoxycytidylate deaminase zinc-binding region KDBPDICH_01549 566552.BIFCAT_01332 8.7e-72 276.2 Bifidobacteriales def2 3.5.1.31,3.5.1.88 ko:K01450,ko:K01462 ko00270,ko00630,map00270,map00630 R00653 RC00165,RC00323 ko00000,ko00001,ko01000 Bacteria 2IJQ5@201174,4D14S@85004,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins KDBPDICH_01550 1437610.BREU_1647 5.9e-182 643.3 Bifidobacteriales Bacteria 2GK3A@201174,4D06I@85004,COG1680@1,COG1680@2 NA|NA|NA V Beta-lactamase KDBPDICH_01551 566552.BIFCAT_01330 0.0 1122.8 Bifidobacteriales yjjK GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 Bacteria 2GKBQ@201174,4CYWH@85004,COG0488@1,COG0488@2 NA|NA|NA S ATP-binding cassette protein, ChvD family KDBPDICH_01552 547043.BIFPSEUDO_02504 8.5e-165 586.3 Bifidobacteriales tesB ko:K10805 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Bacteria 2GJ1B@201174,4CZRC@85004,COG1946@1,COG1946@2 NA|NA|NA I Thioesterase-like superfamily KDBPDICH_01553 547043.BIFPSEUDO_02505 6.2e-94 350.1 Bifidobacteriales Bacteria 2DRQG@1,2HZP6@201174,33CMQ@2,4D14M@85004 NA|NA|NA S Protein of unknown function (DUF3180) KDBPDICH_01554 547043.BIFPSEUDO_02506 2e-272 944.5 Bifidobacteriales folK GO:0000287,GO:0003674,GO:0003824,GO:0003848,GO:0005488,GO:0008150,GO:0016740,GO:0016772,GO:0016778,GO:0040007,GO:0043167,GO:0043169,GO:0046872 1.13.11.81,2.5.1.15,2.7.6.3,3.5.4.16,3.5.4.39,4.1.2.25,5.1.99.8 ko:K00796,ko:K00950,ko:K01495,ko:K01633,ko:K13940,ko:K17488 ko00790,ko01100,map00790,map01100 M00126,M00840,M00841,M00842,M00843 R00428,R03066,R03067,R03503,R03504,R04639,R05046,R05048,R10348,R11037,R11073 RC00002,RC00017,RC00121,RC00263,RC00294,RC00323,RC00721,RC00842,RC00943,RC00945,RC01188,RC01479,RC02504,RC03131,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 iECDH1ME8569_1439.ECDH1ME8569_0136,iEcDH1_1363.EcDH1_3460,iJN746.PP_4698,iLJ478.TM0041,iSBO_1134.SBO_0131 Bacteria 2H3G6@201174,4D0EJ@85004,COG0801@1,COG0801@2,COG1539@1,COG1539@2 NA|NA|NA H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin KDBPDICH_01555 566552.BIFCAT_01326 1.5e-155 555.4 Bifidobacteriales folP 1.13.11.81,2.5.1.15,2.7.6.3,4.1.2.25,5.1.99.8 ko:K00796,ko:K00950,ko:K01633 ko00790,ko01100,map00790,map01100 M00126,M00840,M00841 R03066,R03067,R03503,R03504,R11037,R11073 RC00002,RC00017,RC00121,RC00721,RC00842,RC00943,RC01479,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJDQ@201174,4CZWW@85004,COG0294@1,COG0294@2 NA|NA|NA H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives KDBPDICH_01556 547043.BIFPSEUDO_02508 9.6e-115 419.5 Bifidobacteriales folE GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659 2.7.6.3,3.5.4.16 ko:K00950,ko:K01495 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R03503,R04639,R05046,R05048 RC00002,RC00017,RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 iIT341.HP0928 Bacteria 2GP2P@201174,4CZ5S@85004,COG0302@1,COG0302@2 NA|NA|NA H GTP cyclohydrolase KDBPDICH_01557 547043.BIFPSEUDO_02509 0.0 1317.0 Bifidobacteriales ftsH GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 ko:K03798 M00742 ko00000,ko00002,ko01000,ko01002,ko03110 Bacteria 2GJ4Q@201174,4CZ6U@85004,COG0465@1,COG0465@2 NA|NA|NA O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins KDBPDICH_01558 547043.BIFPSEUDO_02510 3.9e-99 367.5 Bifidobacteriales hpt 2.4.2.8,6.3.4.19 ko:K00760,ko:K04075,ko:K15780 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 R00190,R01132,R01229,R02142,R08237,R08238,R08245,R09597 RC00063,RC00122,RC02633,RC02634 ko00000,ko00001,ko01000,ko03016 Bacteria 2GMDZ@201174,4CZNJ@85004,COG0634@1,COG0634@2 NA|NA|NA F Belongs to the purine pyrimidine phosphoribosyltransferase family KDBPDICH_01559 566552.BIFCAT_01322 8.8e-201 706.1 Bifidobacteriales tilS 2.4.2.8,6.3.4.19 ko:K00760,ko:K04075,ko:K15780 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 R00190,R01132,R01229,R02142,R08237,R08238,R08245,R09597 RC00063,RC00122,RC02633,RC02634 ko00000,ko00001,ko01000,ko03016 Bacteria 2GJR4@201174,4CYSY@85004,COG0037@1,COG0037@2 NA|NA|NA J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine KDBPDICH_01560 547043.BIFPSEUDO_02512 4.7e-234 817.0 Bifidobacteriales dacB 3.4.16.4 ko:K07259 ko00550,map00550 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 2GJPH@201174,4CYXQ@85004,COG2027@1,COG2027@2 NA|NA|NA M D-Ala-D-Ala carboxypeptidase 3 (S13) family KDBPDICH_01561 547043.BIFPSEUDO_02513 1.4e-231 808.5 Bifidobacteriales epsG ko:K00786 ko00000,ko01000 Bacteria 2HZ9V@201174,4CZ5J@85004,COG1215@1,COG1215@2 NA|NA|NA M Glycosyl transferase family 21 KDBPDICH_01562 547043.BIFPSEUDO_02514 1.2e-232 812.4 Bifidobacteriales Bacteria 2GN4Y@201174,4CZD1@85004,COG0628@1,COG0628@2 NA|NA|NA S AI-2E family transporter KDBPDICH_01563 547043.BIFPSEUDO_02515 5.5e-180 636.7 Bifidobacteriales 3.4.14.13 ko:K20742 ko00000,ko01000,ko01002 Bacteria 2GNPU@201174,4CZ7E@85004,COG1215@1,COG1215@2 NA|NA|NA M Glycosyltransferase like family 2 KDBPDICH_01564 547043.BIFPSEUDO_02517 1.8e-204 718.4 Bifidobacteriales fucO GO:0003674,GO:0003824,GO:0004022,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006004,GO:0006066,GO:0008150,GO:0008152,GO:0008198,GO:0008912,GO:0009056,GO:0016052,GO:0016491,GO:0016614,GO:0016616,GO:0019299,GO:0019301,GO:0019317,GO:0019318,GO:0019320,GO:0019751,GO:0034311,GO:0034313,GO:0042354,GO:0042355,GO:0042844,GO:0042846,GO:0043167,GO:0043169,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0046365,GO:0046872,GO:0046914,GO:0051143,GO:0055114,GO:0071704,GO:1901575,GO:1901615,GO:1901616 1.1.1.1,1.1.1.77,1.1.99.37,1.2.98.1 ko:K00048,ko:K13954,ko:K17067 ko00010,ko00071,ko00350,ko00625,ko00626,ko00630,ko00640,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,map00010,map00071,map00350,map00625,map00626,map00630,map00640,map00680,map01100,map01110,map01120,map01130,map01200,map01220 R00614,R00623,R00754,R01781,R02257,R04880,R05233,R05234,R06917,R06927 RC00034,RC00050,RC00087,RC00088,RC00099,RC00116,RC00188,RC00649 ko00000,ko00001,ko01000 iAF1260.b2799,iECDH1ME8569_1439.ECDH1ME8569_2709,iECSE_1348.ECSE_3059,iECW_1372.ECW_m3009,iEKO11_1354.EKO11_0969,iEcDH1_1363.EcDH1_0889,iEcE24377_1341.EcE24377A_3104,iEcHS_1320.EcHS_A2943,iJO1366.b2799,iJR904.b2799,iUMNK88_1353.UMNK88_3484,iWFL_1372.ECW_m3009,iY75_1357.Y75_RS14565 Bacteria 2I2FD@201174,4CZ71@85004,COG1454@1,COG1454@2 NA|NA|NA C Iron-containing alcohol dehydrogenase KDBPDICH_01565 547043.BIFPSEUDO_02518 0.0 1489.6 Bifidobacteriales yliE GO:0003674,GO:0003824,GO:0008081,GO:0016787,GO:0016788,GO:0042578,GO:0071111 Bacteria 2I2FR@201174,4D09B@85004,COG2199@1,COG2199@2,COG2200@1,COG2200@2 NA|NA|NA T Putative diguanylate phosphodiesterase KDBPDICH_01566 547043.BIFPSEUDO_02519 2.2e-111 408.3 Bifidobacteriales Bacteria 2HZFV@201174,4D0AX@85004,COG1285@1,COG1285@2 NA|NA|NA S Domain of unknown function (DUF4956) KDBPDICH_01567 547043.BIFPSEUDO_02520 2.2e-159 568.2 Bifidobacteriales Bacteria 2HZIY@201174,4D0MA@85004,COG5036@1,COG5036@2 NA|NA|NA P VTC domain KDBPDICH_01568 547043.BIFPSEUDO_02521 0.0 1075.1 Bifidobacteriales cotH ko:K06330 ko00000 Bacteria 2ID5Z@201174,4D02F@85004,COG5337@1,COG5337@2 NA|NA|NA M CotH kinase protein KDBPDICH_01569 547043.BIFPSEUDO_02522 2.1e-285 987.6 Bifidobacteriales pelG ko:K21012 ko02025,map02025 ko00000,ko00001 Bacteria 2IE76@201174,4CZ7D@85004,COG4267@1,COG4267@2 NA|NA|NA S Putative exopolysaccharide Exporter (EPS-E) KDBPDICH_01570 547043.BIFPSEUDO_02523 5e-167 593.6 Bifidobacteriales pelF ko:K21011 ko02025,map02025 ko00000,ko00001,ko01003 GT4 Bacteria 2GKEA@201174,4CZ5G@85004,COG0438@1,COG0438@2 NA|NA|NA M Domain of unknown function (DUF3492) KDBPDICH_01571 547043.BIFPSEUDO_02523 1.9e-104 385.2 Bifidobacteriales pelF ko:K21011 ko02025,map02025 ko00000,ko00001,ko01003 GT4 Bacteria 2GKEA@201174,4CZ5G@85004,COG0438@1,COG0438@2 NA|NA|NA M Domain of unknown function (DUF3492) KDBPDICH_01572 547043.BIFPSEUDO_02524 0.0 1255.0 Bifidobacteriales Bacteria 2IERA@201174,4D00K@85004,COG4878@1,COG4878@2 NA|NA|NA S Uncharacterised protein conserved in bacteria (DUF2194) KDBPDICH_01573 326426.Bbr_0041 9.4e-156 556.2 Bifidobacteriales Bacteria 28H6W@1,2ICGP@201174,2Z7J7@2,4CZUA@85004 NA|NA|NA KDBPDICH_01574 326426.Bbr_0040 0.0 1341.3 Bifidobacteriales 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 2ICHN@201174,4CYZ7@85004,COG0451@1,COG0451@2 NA|NA|NA GM ADP-glyceromanno-heptose 6-epimerase activity KDBPDICH_01578 566552.BIFCAT_01311 4e-167 594.0 Bifidobacteriales trmB GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.297,2.1.1.33,2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02493,ko:K02527,ko:K03439 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763,R10806 RC00003,RC00009,RC00077,RC00247,RC03279 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005,ko03012,ko03016 GT30 Bacteria 2GJ8R@201174,4CZKF@85004,COG0220@1,COG0220@2 NA|NA|NA J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA KDBPDICH_01579 566552.BIFCAT_01310 1.2e-199 702.2 Bifidobacteriales galE 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 2GMCW@201174,4CZDB@85004,COG1087@1,COG1087@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family KDBPDICH_01581 1435051.BMOU_1806 2.8e-85 321.2 Bifidobacteriales ptpA GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 ko:K01104,ko:K20945 ko05111,map05111 ko00000,ko00001,ko01000 Bacteria 2IM0Q@201174,4CZWM@85004,COG0394@1,COG0394@2 NA|NA|NA T low molecular weight KDBPDICH_01582 566552.BIFCAT_01305 6.4e-130 469.9 Bifidobacteriales folA GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0070401,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.3 ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 M00126,M00840 R00936,R00937,R00939,R00940,R02235,R02236,R11765 RC00109,RC00110,RC00158 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv2763c Bacteria 2IM1S@201174,4CZM1@85004,COG0262@1,COG0262@2 NA|NA|NA H dihydrofolate reductase KDBPDICH_01583 566552.BIFCAT_01304 2.2e-181 641.3 Bifidobacteriales thyA GO:0003674,GO:0003824,GO:0004799,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009125,GO:0009129,GO:0009130,GO:0009131,GO:0009157,GO:0009159,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009178,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0032259,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042083,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046073,GO:0046078,GO:0046079,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 2.1.1.45 ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKY0@201174,4CZQ3@85004,COG0207@1,COG0207@2 NA|NA|NA F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis KDBPDICH_01584 566552.BIFCAT_01303 2e-73 281.6 Bifidobacteriales attW GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 2IIK7@201174,4D0PB@85004,COG1765@1,COG1765@2 NA|NA|NA O OsmC-like protein KDBPDICH_01585 566552.BIFCAT_01302 6.6e-190 669.8 Bifidobacteriales Bacteria 2GMFE@201174,4CZ6V@85004,COG0589@1,COG0589@2 NA|NA|NA T Universal stress protein family KDBPDICH_01586 547043.BIFPSEUDO_02540 3.2e-78 298.1 Bifidobacteriales ko:K21471 ko00000,ko01000,ko01002,ko01011 Bacteria 2GJX7@201174,4D01Q@85004,COG0791@1,COG0791@2 NA|NA|NA M NlpC/P60 family KDBPDICH_01587 547043.BIFPSEUDO_02542 1.6e-166 592.0 Bifidobacteriales usp 3.5.1.28 ko:K21471,ko:K22409 ko00000,ko01000,ko01002,ko01011 CBM50 Bacteria 2GP2A@201174,4CYXV@85004,COG3942@1,COG3942@2 NA|NA|NA S CHAP domain KDBPDICH_01588 547043.BIFPSEUDO_02543 8.2e-218 762.7 Bifidobacteriales serC GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005886,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0040007,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 2GKYK@201174,4CZ94@85004,COG1932@1,COG1932@2 NA|NA|NA E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine KDBPDICH_01589 547043.BIFPSEUDO_02544 6.2e-41 172.9 Bifidobacteriales Bacteria 2EG1H@1,2IQTR@201174,339TH@2,4D16E@85004 NA|NA|NA KDBPDICH_01590 547043.BIFPSEUDO_02545 3.6e-216 757.3 Bifidobacteriales Bacteria 2GJY7@201174,4CZIM@85004,COG5002@1,COG5002@2 NA|NA|NA T ATPase histidine kinase DNA gyrase B HSP90 domain protein KDBPDICH_01591 547043.BIFPSEUDO_02546 3.3e-89 334.7 Bifidobacteriales phoU ko:K02039 ko00000 Bacteria 2GKAD@201174,4CZ9B@85004,COG0704@1,COG0704@2 NA|NA|NA P Plays a role in the regulation of phosphate uptake KDBPDICH_01592 547043.BIFPSEUDO_02547 0.0 1290.0 Bifidobacteriales 4.2.1.53 ko:K10254 ko00000,ko01000 Bacteria 2GKZ8@201174,4CYZK@85004,COG4716@1,COG4716@2 NA|NA|NA S MCRA family KDBPDICH_01593 1680.BADO_0384 3e-139 501.1 Bifidobacteriales gpmA GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0031323,GO:0031329,GO:0032787,GO:0032991,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0060255,GO:0062012,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 2GK8F@201174,4CZMF@85004,COG0588@1,COG0588@2 NA|NA|NA G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate KDBPDICH_01594 547043.BIFPSEUDO_02549 2.8e-202 711.1 Bifidobacteriales menA GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046428,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 iECH74115_1262.ECH74115_5387,iG2583_1286.G2583_4737 Bacteria 2GJBS@201174,4CZHQ@85004,COG1575@1,COG1575@2 NA|NA|NA H Belongs to the MenA family. Type 1 subfamily KDBPDICH_01595 547043.BIFPSEUDO_02556 0.0 1115.9 Bifidobacteriales lysS GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF1260.b4129,iECDH1ME8569_1439.ECDH1ME8569_3989,iECW_1372.ECW_m4490,iEcDH1_1363.EcDH1_3862,iJN678.lysS,iJO1366.b4129,iWFL_1372.ECW_m4490 Bacteria 2GKE0@201174,4CZHM@85004,COG1190@1,COG1190@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family KDBPDICH_01597 566552.BIFCAT_01288 1e-210 739.2 Bifidobacteriales araJ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K08156,ko:K19577 ko00000,ko02000 2.A.1.2.14,2.A.1.2.65 Bacteria 2GK8C@201174,4CZ46@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_01598 547043.BIFPSEUDO_02559 0.0 1288.9 Bifidobacteriales Bacteria 2I7P1@201174,4CZTS@85004,COG0457@1,COG0457@2 NA|NA|NA S Domain of unknown function (DUF4037) KDBPDICH_01599 566552.BIFCAT_01285 1.8e-116 425.2 Bifidobacteriales Bacteria 2DM2Z@1,2GKMX@201174,31HGC@2,4CZJ9@85004 NA|NA|NA S Protein of unknown function (DUF4125) KDBPDICH_01600 566552.BIFCAT_01283 1.5e-87 328.9 Bifidobacteriales Bacteria 2B2B3@1,2GUI3@201174,31UV6@2,4D1IV@85004 NA|NA|NA KDBPDICH_01601 547043.BIFPSEUDO_02562 6e-144 518.1 Bifidobacteriales pspC Bacteria 2GIVS@201174,4CZZT@85004,COG1983@1,COG1983@2 NA|NA|NA KT PspC domain KDBPDICH_01602 547043.BIFPSEUDO_02564 4.5e-278 963.4 Bifidobacteriales tcsS3 Bacteria 2GJ4J@201174,4CZ2U@85004,COG1983@1,COG1983@2,COG4585@1,COG4585@2 NA|NA|NA KT PspC domain KDBPDICH_01603 547043.BIFPSEUDO_02565 1.9e-121 441.8 Bifidobacteriales degU ko:K07684 ko02020,map02020 M00471 ko00000,ko00001,ko00002,ko02022 Bacteria 2GIVA@201174,4CZW8@85004,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon KDBPDICH_01604 547043.BIFPSEUDO_02566 1.2e-138 499.2 Bifidobacteriales yidP ko:K03710 ko00000,ko03000 Bacteria 2GJZ1@201174,4CZ6A@85004,COG2188@1,COG2188@2 NA|NA|NA K UTRA KDBPDICH_01605 547043.BIFPSEUDO_02567 5.3e-264 916.4 Bifidobacteriales gabT 2.6.1.19,2.6.1.22 ko:K00823,ko:K07250 ko00250,ko00280,ko00410,ko00640,ko00650,ko01100,ko01120,map00250,map00280,map00410,map00640,map00650,map01100,map01120 M00027 R00908,R01648,R04188 RC00006,RC00062,RC00160 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 2GKVH@201174,4CZ7K@85004,COG0160@1,COG0160@2 NA|NA|NA H Aminotransferase class-III KDBPDICH_01606 547043.BIFPSEUDO_02568 6.2e-274 949.5 Bifidobacteriales eat ko:K16238 ko00000,ko02000 2.A.3.5 Bacteria 2GM7U@201174,4CZPA@85004,COG0833@1,COG0833@2 NA|NA|NA E Amino acid permease KDBPDICH_01607 547043.BIFPSEUDO_02569 1.5e-213 748.4 Bifidobacteriales Bacteria 2GXZI@201174,4D06C@85004,COG2334@1,COG2334@2 NA|NA|NA S Choline/ethanolamine kinase KDBPDICH_01608 547043.BIFPSEUDO_02570 7.6e-100 369.8 Bifidobacteriales Bacteria 2IN6N@201174,4D092@85004,COG1335@1,COG1335@2 NA|NA|NA Q Isochorismatase family KDBPDICH_01609 547043.BIFPSEUDO_02571 1.5e-269 934.9 Bifidobacteriales ko:K03457 ko00000 2.A.39 Bacteria 2GJ6B@201174,4CZT2@85004,COG1457@1,COG1457@2 NA|NA|NA U Permease for cytosine/purines, uracil, thiamine, allantoin KDBPDICH_01610 566552.BIFCAT_01276 5.4e-181 640.2 Bifidobacteriales yegV GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0044237,GO:0044238,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704 Bacteria 2IA3T@201174,4CYSM@85004,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase KDBPDICH_01611 547043.BIFPSEUDO_02573 1e-187 662.5 Bifidobacteriales yegU Bacteria 2HZ96@201174,4CZ01@85004,COG1397@1,COG1397@2 NA|NA|NA O ADP-ribosylglycohydrolase KDBPDICH_01613 547043.BIFPSEUDO_02575 1.2e-247 862.1 Bifidobacteriales serS GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.1.1.11 ko:K01875 ko00970,map00970 M00359,M00360 R03662,R08218 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GIWP@201174,4CZ40@85004,COG0172@1,COG0172@2 NA|NA|NA J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) KDBPDICH_01614 547043.BIFPSEUDO_02576 9.8e-200 702.6 Bifidobacteriales Bacteria 2GJ3K@201174,4CYTC@85004,COG1597@1,COG1597@2 NA|NA|NA I Diacylglycerol kinase catalytic domain KDBPDICH_01615 547043.BIFPSEUDO_02577 2.8e-157 561.2 Bifidobacteriales arbG ko:K02538,ko:K03488 ko00000,ko03000 Bacteria 2I8K8@201174,4D08T@85004,COG3711@1,COG3711@2 NA|NA|NA K CAT RNA binding domain KDBPDICH_01616 547043.BIFPSEUDO_02578 0.0 1275.4 Bifidobacteriales crr GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006109,GO:0006793,GO:0006796,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0009401,GO:0009892,GO:0009898,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019222,GO:0019897,GO:0019898,GO:0031234,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045912,GO:0048519,GO:0050789,GO:0051179,GO:0051234,GO:0065007,GO:0071702,GO:0071944,GO:0080090,GO:0098552,GO:0098562 ko:K02755,ko:K02756,ko:K02757,ko:K02777 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 M00265,M00266,M00268,M00270,M00271,M00272,M00303,M00806 R02738,R02780,R04111,R04394,R05132,R08559 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.1,4.A.1.2.11,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6 e_coli_core.b2417,iAF1260.b2417,iAPECO1_1312.APECO1_4128,iB21_1397.B21_02278,iBWG_1329.BWG_2179,iE2348C_1286.E2348C_2603,iEC042_1314.EC042_2626,iEC55989_1330.EC55989_2707,iECABU_c1320.ECABU_c27380,iECBD_1354.ECBD_1264,iECB_1328.ECB_02317,iECDH10B_1368.ECDH10B_2582,iECDH1ME8569_1439.ECDH1ME8569_2351,iECD_1391.ECD_02317,iECED1_1282.ECED1_2861,iECH74115_1262.ECH74115_3648,iECIAI1_1343.ECIAI1_2475,iECIAI39_1322.ECIAI39_2563,iECNA114_1301.ECNA114_2494,iECO103_1326.ECO103_2936,iECO111_1330.ECO111_3147,iECO26_1355.ECO26_3470,iECOK1_1307.ECOK1_2734,iECS88_1305.ECS88_2607,iECSE_1348.ECSE_2708,iECSF_1327.ECSF_2281,iECSP_1301.ECSP_3365,iECUMN_1333.ECUMN_2739,iECW_1372.ECW_m2646,iEKO11_1354.EKO11_1311,iETEC_1333.ETEC_2530,iEcDH1_1363.EcDH1_1244,iEcE24377_1341.EcE24377A_2704,iEcHS_1320.EcHS_A2552,iEcSMS35_1347.EcSMS35_2572,iEcolC_1368.EcolC_1261,iG2583_1286.G2583_2949,iJO1366.b2417,iJR904.b2417,iLF82_1304.LF82_0357,iNRG857_1313.NRG857_12120,iSFV_1184.SFV_2469,iSF_1195.SF2472,iSFxv_1172.SFxv_2721,iSSON_1240.SSON_2506,iS_1188.S2618,iUMN146_1321.UM146_04535,iUMNK88_1353.UMNK88_3019,iUTI89_1310.UTI89_C2751,iWFL_1372.ECW_m2646,iY75_1357.Y75_RS12665,ic_1306.c2952 Bacteria 2GK6B@201174,4CZR7@85004,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G pts system, glucose-specific IIABC component KDBPDICH_01617 547043.BIFPSEUDO_02579 0.0 1141.3 Bifidobacteriales pgm GO:0000271,GO:0003674,GO:0003824,GO:0004614,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005996,GO:0006006,GO:0006012,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0019318,GO:0019320,GO:0019388,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0055114,GO:0071704,GO:1901575,GO:1901576 5.4.2.2 ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00549 R00959,R01057,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1376,iECED1_1282.ECED1_0670,iECNA114_1301.ECNA114_0627,iECOK1_1307.ECOK1_0699,iECP_1309.ECP_0709,iECS88_1305.ECS88_0725,iJN678.pgm,iLF82_1304.LF82_1632,iNRG857_1313.NRG857_03110,iUMN146_1321.UM146_14115,iYL1228.KPN_00711 Bacteria 2H1PI@201174,4CZ7X@85004,COG0033@1,COG0033@2 NA|NA|NA G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KDBPDICH_01618 547043.BIFPSEUDO_02580 6.1e-151 540.0 Bifidobacteriales Bacteria 2HY65@201174,4D0IP@85004,COG3279@1,COG3279@2 NA|NA|NA T LytTr DNA-binding domain KDBPDICH_01619 547043.BIFPSEUDO_02581 5.7e-250 869.8 Bifidobacteriales Bacteria 2IBRI@201174,4D07Q@85004,COG3290@1,COG3290@2 NA|NA|NA T GHKL domain KDBPDICH_01620 547043.BIFPSEUDO_02582 1e-213 749.2 Bifidobacteriales rnhA GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 2GK53@201174,4CZGC@85004,COG0328@1,COG0328@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids KDBPDICH_01621 547043.BIFPSEUDO_02583 2.4e-127 461.5 Bifidobacteriales rpiA GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.7.1.12,5.3.1.6 ko:K00851,ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167,M00580 R01056,R01737 RC00002,RC00017,RC00434 ko00000,ko00001,ko00002,ko01000 Bacteria 2GMHW@201174,4CZDH@85004,COG0120@1,COG0120@2 NA|NA|NA G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate KDBPDICH_01623 547043.BIFPSEUDO_02585 3.8e-108 397.5 Bifidobacteriales Bacteria 2EHBK@1,2ICD4@201174,33B3F@2,4CZY5@85004 NA|NA|NA KDBPDICH_01624 566552.BIFCAT_01502 4.1e-251 873.6 Bifidobacteriales radA GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K04485 ko00000,ko03400 Bacteria 2GMQ0@201174,4CZE1@85004,COG1066@1,COG1066@2 NA|NA|NA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function KDBPDICH_01625 547043.BIFPSEUDO_02587 6.8e-218 763.1 Bifidobacteriales ribF GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008531,GO:0009058,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009124,GO:0009156,GO:0009161,GO:0009165,GO:0009231,GO:0009259,GO:0009260,GO:0009398,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0034641,GO:0034654,GO:0042364,GO:0042726,GO:0042727,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046390,GO:0046444,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKQF@201174,4CYXT@85004,COG0196@1,COG0196@2 NA|NA|NA H riboflavin kinase KDBPDICH_01626 566552.BIFCAT_01504 2.5e-187 661.4 Bifidobacteriales truB GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 ko:K03177 ko00000,ko01000,ko03016 Bacteria 2GJZK@201174,4CZED@85004,COG0130@1,COG0130@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs KDBPDICH_01627 547043.BIFPSEUDO_02589 2.2e-69 268.5 Bifidobacteriales rbfA ko:K02834 ko00000,ko03009 Bacteria 2IKXP@201174,4CZZZ@85004,COG0858@1,COG0858@2 NA|NA|NA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA KDBPDICH_01628 1435051.BMOU_1739 0.0 1214.5 Bifidobacteriales infB ko:K02519 ko00000,ko03012,ko03029 Bacteria 2GKPH@201174,4CZ4B@85004,COG0532@1,COG0532@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex KDBPDICH_01629 547043.BIFPSEUDO_02593 6.1e-191 673.3 Bifidobacteriales nusA ko:K02600 ko00000,ko03009,ko03021 Bacteria 2GJDJ@201174,4CYTW@85004,COG0195@1,COG0195@2 NA|NA|NA K Participates in both transcription termination and antitermination KDBPDICH_01630 547043.BIFPSEUDO_02594 1.1e-76 293.1 Bifidobacteriales Bacteria 2B54U@1,2HXKT@201174,31XYD@2,4D0IH@85004 NA|NA|NA KDBPDICH_01632 547043.BIFPSEUDO_02599 4.4e-183 647.1 Bifidobacteriales truA GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 5.4.99.12 ko:K06173 ko00000,ko01000,ko03016 Bacteria 2GJ6C@201174,4CZ8H@85004,COG0101@1,COG0101@2 NA|NA|NA J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs KDBPDICH_01633 1435051.BMOU_1733 1.3e-66 259.2 Bifidobacteriales rplQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015934,GO:0016020,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 ko:K02879 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IHV2@201174,4D0PZ@85004,COG0203@1,COG0203@2 NA|NA|NA J Ribosomal protein L17 KDBPDICH_01634 547043.BIFPSEUDO_02601 4.7e-185 653.7 Bifidobacteriales rpoA GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 2GJJ5@201174,4CZEN@85004,COG0202@1,COG0202@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates KDBPDICH_01635 1680.BADO_0353 1.9e-65 255.0 Bifidobacteriales rpsK GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02948 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IFFC@201174,4D0PJ@85004,COG0100@1,COG0100@2 NA|NA|NA J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome KDBPDICH_01636 1435051.BMOU_1730 3.3e-62 244.2 Bifidobacteriales rpsM GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02952 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IHPN@201174,4D0PQ@85004,COG0099@1,COG0099@2 NA|NA|NA J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits KDBPDICH_01637 158787.BSCA_1163 8.4e-14 81.6 Bifidobacteriales rpmJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02919 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2GWMH@201174,4D1NT@85004,COG0257@1,COG0257@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL36 family KDBPDICH_01638 1435051.BMOU_1728 1.6e-32 144.8 Bifidobacteriales infA GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009986,GO:0016020,GO:0030246,GO:0030247,GO:0030312,GO:0040007,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071944,GO:2001065 ko:K02518 ko00000,ko03012 Bacteria 2IQ4B@201174,4D16H@85004,COG0361@1,COG0361@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex KDBPDICH_01639 547043.BIFPSEUDO_02606 2.5e-98 364.8 Bifidobacteriales adk 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GJ7T@201174,4CZ7Z@85004,COG0563@1,COG0563@2 NA|NA|NA F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism KDBPDICH_01640 547043.BIFPSEUDO_02607 9.9e-239 832.4 Bifidobacteriales secY GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5 Bacteria 2GJ26@201174,4CYWU@85004,COG0201@1,COG0201@2 NA|NA|NA U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently KDBPDICH_01641 1437600.JDUI01000015_gene1073 5.5e-214 750.0 Bifidobacteriales bdhA ko:K00100,ko:K19955 ko00650,ko01120,map00650,map01120 R03544,R03545 RC00087 ko00000,ko00001,ko01000 Bacteria 2IAN0@201174,4D02T@85004,COG1979@1,COG1979@2 NA|NA|NA C Iron-containing alcohol dehydrogenase KDBPDICH_01642 547043.BIFPSEUDO_02487 3e-167 594.3 Bifidobacteriales ko:K01250 ko00000,ko01000 Bacteria 2IGHG@201174,4D0I0@85004,COG1957@1,COG1957@2 NA|NA|NA F Inosine-uridine preferring nucleoside hydrolase KDBPDICH_01643 547043.BIFPSEUDO_02486 4.1e-289 1000.0 Bifidobacteriales xylB 1.1.1.57,2.7.1.17 ko:K00040,ko:K00854,ko:K19168 ko00040,ko01100,map00040,map01100 M00014,M00061 R01639,R02454 RC00002,RC00085,RC00538 ko00000,ko00001,ko00002,ko01000,ko02048 Bacteria 2GJDZ@201174,4CZH0@85004,COG1070@1,COG1070@2 NA|NA|NA G FGGY family of carbohydrate kinases, C-terminal domain KDBPDICH_01644 1437610.BREU_1633 8.8e-226 789.3 Bifidobacteriales xylR Bacteria 2GJIE@201174,4CZPD@85004,COG1940@1,COG1940@2 NA|NA|NA GK ROK family KDBPDICH_01645 78344.BIGA_1411 9.5e-98 363.2 Bifidobacteriales ykoE ko:K16925 M00582 ko00000,ko00002,ko02000 3.A.1.30 Bacteria 2H5VZ@201174,4CZ6M@85004,COG4721@1,COG4721@2 NA|NA|NA S ABC-type cobalt transport system, permease component KDBPDICH_01646 547043.BIFPSEUDO_02481 9.1e-81 307.0 Bifidobacteriales ydcZ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K09936 ko02024,map02024 ko00000,ko00001,ko02000 2.A.7.21 Bacteria 2IB1U@201174,4D0GN@85004,COG3238@1,COG3238@2 NA|NA|NA S Putative inner membrane exporter, YdcZ KDBPDICH_01647 547043.BIFPSEUDO_02480 2e-107 395.2 Bifidobacteriales ko:K07149 ko00000 Bacteria 2IADD@201174,4D0K2@85004,COG2364@1,COG2364@2 NA|NA|NA S Membrane KDBPDICH_01648 547043.BIFPSEUDO_02479 9.5e-267 925.6 Bifidobacteriales 3.6.4.12 ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 2GZ30@201174,4CYSX@85004,COG2865@1,COG2865@2 NA|NA|NA K Putative ATP-dependent DNA helicase recG C-terminal KDBPDICH_01649 566552.BIFCAT_01336 1.3e-248 865.1 Bifidobacteriales metY 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 Bacteria 2I2EB@201174,4CYSA@85004,COG2873@1,COG2873@2 NA|NA|NA H Psort location Cytoplasmic, score 9.98 KDBPDICH_01650 547043.BIFPSEUDO_02477 1.3e-267 928.3 Bifidobacteriales xylA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 R00878,R01432 RC00376,RC00516 ko00000,ko00001,ko01000 iECO26_1355.ECO26_5036,iHN637.CLJU_RS08960,iPC815.YPO4038 Bacteria 2GJCA@201174,4CZK8@85004,COG2115@1,COG2115@2 NA|NA|NA G Belongs to the xylose isomerase family KDBPDICH_01651 547043.BIFPSEUDO_02475 0.0 1172.9 Bifidobacteriales 3.2.1.37,3.2.1.55 ko:K01198,ko:K01209 ko00520,ko01100,map00520,map01100 R01433,R01762 RC00467 ko00000,ko00001,ko01000 GH43,GH51 Bacteria 2GIW3@201174,4CZY8@85004,COG3507@1,COG3507@2 NA|NA|NA G Belongs to the glycosyl hydrolase 43 family KDBPDICH_01652 518635.BIFANG_03771 1e-182 646.0 Bifidobacteriales ko:K02529,ko:K17640 ko00000,ko03000 Bacteria 2GJRG@201174,4CZI0@85004,COG1609@1,COG1609@2 NA|NA|NA K Bacterial regulatory proteins, lacI family KDBPDICH_01653 566552.BIFCAT_01342 8e-230 802.7 Bifidobacteriales msmE ko:K02027,ko:K10117 ko02010,map02010 M00196,M00207 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.28 Bacteria 2GP9H@201174,4D01H@85004,COG1653@1,COG1653@2 NA|NA|NA G ABC transporter periplasmic binding protein YcjN precursor K02027 KDBPDICH_01654 518635.BIFANG_03774 5.1e-182 643.7 Bifidobacteriales MA20_14025 ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2GKJI@201174,4CZQU@85004,COG1175@1,COG1175@2 NA|NA|NA U Binding-protein-dependent transport system inner membrane component KDBPDICH_01655 566552.BIFCAT_01344 1.2e-155 555.8 Bifidobacteriales MA20_14020 ko:K10119 ko02010,map02010 M00196 ko00000,ko00001,ko00002,ko02000 3.A.1.1.28 Bacteria 2GNQW@201174,4CZTW@85004,COG0395@1,COG0395@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_01656 566552.BIFCAT_01345 0.0 1165.6 Bifidobacteriales xynB 3.2.1.37 ko:K01198 ko00520,ko01100,map00520,map01100 R01433 RC00467 ko00000,ko00001,ko01000 GH43 Bacteria 2GIW3@201174,4CZ5I@85004,COG3507@1,COG3507@2 NA|NA|NA G Belongs to the glycosyl hydrolase 43 family KDBPDICH_01657 547043.BIFPSEUDO_02469 0.0 1385.5 Bifidobacteriales 3.1.1.53 ko:K05970 ko00000,ko01000 Bacteria 2ICNG@201174,4CZQA@85004,COG3250@1,COG3250@2 NA|NA|NA G Glycosyl hydrolase family 2, sugar binding domain protein KDBPDICH_01658 547043.BIFPSEUDO_02467 2.1e-106 391.7 Bifidobacteriales lacA 2.3.1.79 ko:K00661 ko00000,ko01000 Bacteria 2GNUB@201174,4CZ5K@85004,COG0110@1,COG0110@2 NA|NA|NA S Bacterial transferase hexapeptide repeat protein KDBPDICH_01659 547043.BIFPSEUDO_02466 1.2e-288 998.4 Bifidobacteriales xylB 1.1.1.57,2.7.1.17 ko:K00040,ko:K00854,ko:K19168 ko00040,ko01100,map00040,map01100 M00014,M00061 R01639,R02454 RC00002,RC00085,RC00538 ko00000,ko00001,ko00002,ko01000,ko02048 Bacteria 2GJDZ@201174,4CZH0@85004,COG1070@1,COG1070@2 NA|NA|NA G FGGY family of carbohydrate kinases, C-terminal domain KDBPDICH_01660 547043.BIFPSEUDO_02465 1.5e-225 788.5 Bifidobacteriales xylR Bacteria 2GJIE@201174,4CZPD@85004,COG1940@1,COG1940@2 NA|NA|NA GK ROK family KDBPDICH_01662 547043.BIFPSEUDO_02463 1.5e-35 154.8 Bifidobacteriales rpmE GO:0008150,GO:0040007 ko:K02909 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 2IQ4I@201174,4D17F@85004,COG0254@1,COG0254@2 NA|NA|NA J Binds the 23S rRNA KDBPDICH_01663 547043.BIFPSEUDO_02461 1.4e-190 672.2 Bifidobacteriales prfA ko:K02835 ko00000,ko03012 Bacteria 2GJWG@201174,4CYX4@85004,COG0216@1,COG0216@2 NA|NA|NA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA KDBPDICH_01664 547043.BIFPSEUDO_02460 3.2e-172 610.9 Bifidobacteriales prmC 2.1.1.297 ko:K02493 R10806 RC00003,RC03279 ko00000,ko01000,ko03012 Bacteria 2GMH1@201174,4CZB3@85004,COG2890@1,COG2890@2 NA|NA|NA J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif KDBPDICH_01665 547043.BIFPSEUDO_02459 2.7e-219 767.7 Bifidobacteriales livK ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 2GM00@201174,4CZYU@85004,COG0683@1,COG0683@2 NA|NA|NA E Receptor family ligand binding region KDBPDICH_01666 547043.BIFPSEUDO_02458 9.5e-156 556.2 Bifidobacteriales ko:K01997 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 2GMAY@201174,4CZQ6@85004,COG0559@1,COG0559@2 NA|NA|NA U Belongs to the binding-protein-dependent transport system permease family KDBPDICH_01667 547043.BIFPSEUDO_02457 6.7e-196 689.9 Bifidobacteriales livM ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 2GJB3@201174,4CYTE@85004,COG4177@1,COG4177@2 NA|NA|NA U Belongs to the binding-protein-dependent transport system permease family KDBPDICH_01668 547043.BIFPSEUDO_02456 1.8e-150 538.5 Bifidobacteriales ko:K01995 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 2GMEE@201174,4CZBX@85004,COG0411@1,COG0411@2 NA|NA|NA E Branched-chain amino acid ATP-binding cassette transporter KDBPDICH_01669 547043.BIFPSEUDO_02455 1.9e-124 451.8 Bifidobacteriales livF ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 2GKSQ@201174,4CZE0@85004,COG0410@1,COG0410@2 NA|NA|NA E ATPases associated with a variety of cellular activities KDBPDICH_01670 547043.BIFPSEUDO_02454 3.8e-114 417.5 Bifidobacteriales ywlC GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 ko:K07566 R10463 RC00745 ko00000,ko01000,ko03009,ko03016 Bacteria 2GK2X@201174,4CYVA@85004,COG0009@1,COG0009@2 NA|NA|NA J Belongs to the SUA5 family KDBPDICH_01671 547043.BIFPSEUDO_02453 1.3e-194 685.6 Bifidobacteriales tagO GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0034645,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0045229,GO:0046872,GO:0046914,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:1901576 2.7.8.33,2.7.8.35 ko:K02851 R08856 RC00002 ko00000,ko01000,ko01003,ko01005 Bacteria 2GIT7@201174,4CZ4P@85004,COG0472@1,COG0472@2 NA|NA|NA M Glycosyl transferase family 4 KDBPDICH_01672 547043.BIFPSEUDO_02452 2.2e-287 994.2 Bifidobacteriales guaB GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006183,GO:0006195,GO:0006204,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009125,GO:0009126,GO:0009127,GO:0009128,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009154,GO:0009156,GO:0009158,GO:0009161,GO:0009163,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009169,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009261,GO:0009987,GO:0016020,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046037,GO:0046039,GO:0046040,GO:0046128,GO:0046129,GO:0046390,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:0097292,GO:0097293,GO:1901068,GO:1901070,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GITZ@201174,4CZ2S@85004,COG0516@1,COG0516@2,COG0517@1,COG0517@2 NA|NA|NA F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth KDBPDICH_01673 547043.BIFPSEUDO_02451 2.2e-122 444.9 Bifidobacteriales orn GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360 ko:K13288 ko03008,map03008 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 2GJR7@201174,4CYZY@85004,COG1949@1,COG1949@2 NA|NA|NA L 3'-to-5' exoribonuclease specific for small oligoribonucleotides KDBPDICH_01674 547043.BIFPSEUDO_02450 4.5e-163 580.5 Bifidobacteriales supH Bacteria 2HZBZ@201174,4CZNM@85004,COG0561@1,COG0561@2 NA|NA|NA S Sucrose-6F-phosphate phosphohydrolase KDBPDICH_01675 547043.BIFPSEUDO_02449 1.5e-269 934.9 Bifidobacteriales recD2 3.6.4.12 ko:K15255 ko00000,ko01000,ko03029,ko03032 Bacteria 2HFY1@201174,4CZ0C@85004,COG0507@1,COG0507@2 NA|NA|NA L PIF1-like helicase KDBPDICH_01676 547043.BIFPSEUDO_02448 0.0 1229.5 Bifidobacteriales proS GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GJ9G@201174,4CZ6E@85004,COG0442@1,COG0442@2 NA|NA|NA J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS KDBPDICH_01677 547043.BIFPSEUDO_02446 8.9e-98 362.8 Bifidobacteriales ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria 2GQIQ@201174,4D17E@85004,COG0629@1,COG0629@2 NA|NA|NA L Single-strand binding protein family KDBPDICH_01678 547043.BIFPSEUDO_02445 0.0 1412.5 Bifidobacteriales pepO 3.4.24.71 ko:K01415,ko:K07386 ko00000,ko01000,ko01002,ko04147 Bacteria 2GNJY@201174,4CYVU@85004,COG3590@1,COG3590@2 NA|NA|NA O Peptidase family M13 KDBPDICH_01679 547043.BIFPSEUDO_02444 1.6e-151 542.0 Bifidobacteriales map 3.4.11.18 ko:K01265 ko00000,ko01000,ko01002 Bacteria 2GKKB@201174,4CZAA@85004,COG0024@1,COG0024@2 NA|NA|NA E Methionine aminopeptidase KDBPDICH_01680 547043.BIFPSEUDO_02442 5.4e-250 869.8 Bifidobacteriales gltA GO:0003674,GO:0003824,GO:0004108,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016746,GO:0016999,GO:0017144,GO:0019752,GO:0036440,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046912,GO:0055114,GO:0071704,GO:0071944,GO:0072350 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 iIT341.HP0026,iYL1228.KPN_00727 Bacteria 2GJ7E@201174,4CZ2J@85004,COG0372@1,COG0372@2 NA|NA|NA C Citrate synthase, C-terminal domain KDBPDICH_01681 547043.BIFPSEUDO_02441 5.8e-143 513.8 Bifidobacteriales dapD GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008666,GO:0016020,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0030312,GO:0031402,GO:0031420,GO:0040007,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0048037,GO:0050662,GO:0071944 2.3.1.117 ko:K00674 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R04365 RC00004,RC01136 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1201c Bacteria 2GIZ9@201174,4CYVT@85004,COG2171@1,COG2171@2 NA|NA|NA E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA KDBPDICH_01682 547043.BIFPSEUDO_02440 1.2e-82 312.4 Bifidobacteriales rlmH 2.1.1.177 ko:K00783 ko00000,ko01000,ko03009 Bacteria 2IJE0@201174,4D0P5@85004,COG1576@1,COG1576@2 NA|NA|NA J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA KDBPDICH_01683 547043.BIFPSEUDO_02438 1.1e-190 672.5 Bifidobacteriales prfB GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02836 ko00000,ko03012 Bacteria 2GJ0F@201174,4CZJX@85004,COG1186@1,COG1186@2 NA|NA|NA J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA KDBPDICH_01684 547043.BIFPSEUDO_02437 2.3e-168 598.6 Bifidobacteriales ftsE GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0019897,GO:0019898,GO:0030554,GO:0031234,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 ko:K09811,ko:K09812 ko02010,map02010 M00256 ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 Bacteria 2GJE1@201174,4CYYQ@85004,COG2884@1,COG2884@2 NA|NA|NA D Cell division ATP-binding protein FtsE KDBPDICH_01685 547043.BIFPSEUDO_02436 3.4e-161 574.3 Bifidobacteriales ftsX GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009274,GO:0009276,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0032506,GO:0034097,GO:0040007,GO:0042173,GO:0042221,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0090529,GO:1902531 ko:K09811,ko:K09812 ko02010,map02010 M00256 ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 Bacteria 2GJMA@201174,4CZSQ@85004,COG2177@1,COG2177@2 NA|NA|NA D Part of the ABC transporter FtsEX involved in cellular division KDBPDICH_01686 547043.BIFPSEUDO_02435 8.9e-150 537.0 Bifidobacteriales usp 3.5.1.28 ko:K21471,ko:K22409 ko00000,ko01000,ko01002,ko01011 CBM50 Bacteria 2GZG8@201174,4CYQJ@85004,COG3942@1,COG3942@2 NA|NA|NA D CHAP domain protein KDBPDICH_01687 547043.BIFPSEUDO_02434 2e-77 295.0 Bifidobacteriales smpB GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 ko:K03664 ko00000 Bacteria 2GJX1@201174,4CZG4@85004,COG0691@1,COG0691@2 NA|NA|NA J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA KDBPDICH_01688 547043.BIFPSEUDO_02432 3e-157 561.2 Bifidobacteriales pknD ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 2GJQW@201174,4CZ6H@85004,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter, substrate-binding protein, family 3 KDBPDICH_01689 547043.BIFPSEUDO_02431 2.5e-151 541.6 Bifidobacteriales pknD ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 2GJQW@201174,4CZ6H@85004,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter, substrate-binding protein, family 3 KDBPDICH_01690 547043.BIFPSEUDO_02430 1.3e-136 492.7 Bifidobacteriales pknD ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 2GJQW@201174,4CZ6H@85004,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter, substrate-binding protein, family 3 KDBPDICH_01691 547043.BIFPSEUDO_02428 2.2e-142 511.9 Bifidobacteriales yecS ko:K02029,ko:K10009 ko02010,map02010 M00234,M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.10,3.A.1.3.14 Bacteria 2GJJ9@201174,4CYSN@85004,COG0765@1,COG0765@2 NA|NA|NA E Binding-protein-dependent transport system inner membrane component KDBPDICH_01692 547043.BIFPSEUDO_02427 8.5e-145 519.6 Bifidobacteriales tcyC 3.6.3.21 ko:K02028 M00236 ko00000,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 2GIZW@201174,4CZSB@85004,COG1126@1,COG1126@2 NA|NA|NA E ATPases associated with a variety of cellular activities KDBPDICH_01693 547043.BIFPSEUDO_02426 0.0 1248.8 Bifidobacteriales glmS GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016020,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 iNJ661.Rv3436c,iSB619.SA_RS11245,iYO844.BSU01780 Bacteria 2GKH0@201174,4CZ1G@85004,COG0449@1,COG0449@2 NA|NA|NA M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source KDBPDICH_01694 547043.BIFPSEUDO_02425 2.1e-145 521.5 Bifidobacteriales rluA 5.4.99.28,5.4.99.29 ko:K06177 ko00000,ko01000,ko03009,ko03016 Bacteria 2GJ2Z@201174,4CZB2@85004,COG0564@1,COG0564@2 NA|NA|NA J RNA pseudouridylate synthase KDBPDICH_01695 547043.BIFPSEUDO_02424 5.3e-229 800.0 Bifidobacteriales sstT GO:0003333,GO:0003674,GO:0005215,GO:0005283,GO:0005295,GO:0005310,GO:0005342,GO:0005343,GO:0005416,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006820,GO:0006835,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015077,GO:0015081,GO:0015171,GO:0015175,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015370,GO:0015672,GO:0015711,GO:0015804,GO:0015849,GO:0016020,GO:0016021,GO:0017153,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0032329,GO:0034220,GO:0035725,GO:0044425,GO:0044464,GO:0046873,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:1903825,GO:1905039 ko:K07862 ko00000,ko02000 2.A.23.4 iAF1260.b3089,iBWG_1329.BWG_2799,iECDH10B_1368.ECDH10B_3265,iECDH1ME8569_1439.ECDH1ME8569_2984,iECH74115_1262.ECH74115_4404,iECIAI1_1343.ECIAI1_3235,iECO103_1326.ECO103_3834,iECO111_1330.ECO111_3911,iECO26_1355.ECO26_4192,iECP_1309.ECP_3180,iECSE_1348.ECSE_3370,iECSP_1301.ECSP_4063,iECUMN_1333.ECUMN_3573,iECW_1372.ECW_m3356,iECs_1301.ECs3971,iEKO11_1354.EKO11_0630,iETEC_1333.ETEC_3359,iEcDH1_1363.EcDH1_0612,iEcE24377_1341.EcE24377A_3557,iG2583_1286.G2583_3813,iJO1366.b3089,iJR904.b3089,iSFV_1184.SFV_3130,iSSON_1240.SSON_3242,iUMNK88_1353.UMNK88_3845,iWFL_1372.ECW_m3356,iY75_1357.Y75_RS16050,iYL1228.KPN_03517,iZ_1308.Z4442 Bacteria 2I861@201174,4D300@85004,COG3633@1,COG3633@2 NA|NA|NA E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) KDBPDICH_01696 547043.BIFPSEUDO_02420 0.0 1436.0 Bifidobacteriales lacZ5 3.2.1.23 ko:K12308 ko00052,map00052 R01105 RC00452 ko00000,ko00001,ko01000 Bacteria 2GMDT@201174,4CZ38@85004,COG1874@1,COG1874@2 NA|NA|NA G Psort location Cytoplasmic, score 8.87 KDBPDICH_01697 547043.BIFPSEUDO_02417 5.3e-275 953.0 Bifidobacteriales ko:K02027 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2GJIP@201174,4CYRE@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_01698 547043.BIFPSEUDO_02416 4.8e-122 443.7 Bifidobacteriales Bacteria 2GPYG@201174,4D19D@85004,COG0745@1,COG0745@2 NA|NA|NA K Transcriptional regulatory protein, C terminal KDBPDICH_01699 547043.BIFPSEUDO_02415 1.2e-143 515.8 Bifidobacteriales Bacteria 2INZZ@201174,4D13R@85004,COG0642@1,COG2205@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain KDBPDICH_01700 547043.BIFPSEUDO_02414 7e-82 309.7 Bifidobacteriales Bacteria 2GU90@201174,4D1HM@85004,COG3631@1,COG3631@2 NA|NA|NA S SnoaL-like domain KDBPDICH_01701 547043.BIFPSEUDO_02413 2e-143 515.0 Bifidobacteriales coaX GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 ko:K03525 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1986 Bacteria 2GMRQ@201174,4CZQS@85004,COG1521@1,COG1521@2 NA|NA|NA H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis KDBPDICH_01702 547043.BIFPSEUDO_02412 7e-242 842.8 Bifidobacteriales coaBC 4.1.1.36,6.3.2.5 ko:K01598,ko:K13038,ko:K21977 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJGJ@201174,4D0GJ@85004,COG0452@1,COG0452@2 NA|NA|NA H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine KDBPDICH_01703 547043.BIFPSEUDO_02411 8.7e-293 1012.3 Bifidobacteriales ko:K02035 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2GJ4B@201174,4CYWF@85004,COG0747@1,COG0747@2 NA|NA|NA E ABC transporter, substrate-binding protein, family 5 KDBPDICH_01704 547043.BIFPSEUDO_02410 1.3e-166 592.4 Bifidobacteriales ko:K02033 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2GK0Z@201174,4CYST@85004,COG0601@1,COG0601@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_01705 547043.BIFPSEUDO_02409 2.8e-139 501.5 Bifidobacteriales ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 2GNQ5@201174,4CZ84@85004,COG1173@1,COG1173@2 NA|NA|NA EP Binding-protein-dependent transport system inner membrane component KDBPDICH_01706 547043.BIFPSEUDO_02408 1.4e-136 492.3 Bifidobacteriales oppD ko:K02031 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 2GIXV@201174,4CZ3U@85004,COG0444@1,COG0444@2 NA|NA|NA EP oligopeptide transport protein of the ABC superfamily, ATP-binding component KDBPDICH_01707 547043.BIFPSEUDO_02407 4e-139 500.7 Bifidobacteriales sapF ko:K02032,ko:K19230 ko01503,ko02010,ko02024,map01503,map02010,map02024 M00239,M00739 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.5 Bacteria 2GP46@201174,4CYXD@85004,COG4608@1,COG4608@2 NA|NA|NA E ATPases associated with a variety of cellular activities KDBPDICH_01708 547043.BIFPSEUDO_02406 1.5e-191 675.2 Bifidobacteriales cbs GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 2.5.1.47,4.2.1.22 ko:K01697,ko:K01738 ko00260,ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00260,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021,M00035,M00338 R00891,R00897,R01290,R03601,R04859,R04942 RC00020,RC00056,RC00069,RC00256,RC00489,RC01246,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 Bacteria 2GIXE@201174,4CYQ4@85004,COG0031@1,COG0031@2 NA|NA|NA E Pyridoxal-phosphate dependent enzyme KDBPDICH_01709 547043.BIFPSEUDO_02405 1e-218 765.8 Bifidobacteriales metB GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.8 ko:K01739,ko:K01758,ko:K01760 ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017,M00338 R00782,R00999,R01001,R01286,R01288,R02408,R02508,R03217,R03260,R04770,R04930,R04941,R04944,R04945,R04946,R09366 RC00020,RC00056,RC00069,RC00348,RC00382,RC00420,RC00488,RC00710,RC01209,RC01210,RC01245,RC02303,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000,ko04147 iNJ661.Rv1079 Bacteria 2GJ5S@201174,4CYY2@85004,COG0626@1,COG0626@2 NA|NA|NA E Cys/Met metabolism PLP-dependent enzyme KDBPDICH_01710 547043.BIFPSEUDO_02403 0.0 1619.4 Bifidobacteriales macB_2 ko:K02003,ko:K02004,ko:K05685 ko02010,map02010 M00258,M00709 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.122.1,3.A.1.122.12 Bacteria 2GK3I@201174,4D0AY@85004,COG0577@1,COG0577@2,COG1136@1,COG1136@2 NA|NA|NA V ATPases associated with a variety of cellular activities KDBPDICH_01711 547043.BIFPSEUDO_02402 0.0 1239.6 Bifidobacteriales recQ 3.6.4.12 ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 Bacteria 2GJSS@201174,4CZ0I@85004,COG0514@1,COG0514@2 NA|NA|NA L ATP-dependent DNA helicase RecQ KDBPDICH_01712 547043.BIFPSEUDO_02401 3.9e-92 344.0 Bifidobacteriales luxS GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0007154,GO:0007267,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009116,GO:0009119,GO:0009372,GO:0009987,GO:0010699,GO:0016053,GO:0016829,GO:0016846,GO:0017144,GO:0019284,GO:0019752,GO:0023052,GO:0033353,GO:0034641,GO:0042278,GO:0043094,GO:0043102,GO:0043436,GO:0043768,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046128,GO:0046394,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0051704,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901657 4.4.1.21 ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 M00609 R01291 RC00069,RC01929 ko00000,ko00001,ko00002,ko01000 iECIAI39_1322.ECIAI39_2877,iPC815.YPO3300 Bacteria 2GJVF@201174,4CYZ4@85004,COG1854@1,COG1854@2 NA|NA|NA H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) KDBPDICH_01713 566552.BIFCAT_01758 2.7e-102 377.9 Bifidobacteriales cysE 2.3.1.178 ko:K06718 ko00260,ko01100,ko01120,map00260,map01100,map01120 M00033 R06978 RC00004,RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 2HBE2@201174,4CZTR@85004,COG1670@1,COG1670@2 NA|NA|NA J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins KDBPDICH_01714 547043.BIFPSEUDO_02398 3.1e-270 937.2 Bifidobacteriales yhdG ko:K03294 ko00000 2.A.3.2 Bacteria 2GJ75@201174,4CYZA@85004,COG0531@1,COG0531@2 NA|NA|NA E aromatic amino acid transport protein AroP K03293 KDBPDICH_01715 547043.BIFPSEUDO_02397 1.3e-306 1058.1 Bifidobacteriales alr GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006023,GO:0006024,GO:0006082,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008784,GO:0009058,GO:0009059,GO:0009078,GO:0009079,GO:0009252,GO:0009273,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0019842,GO:0030170,GO:0030203,GO:0030632,GO:0034645,GO:0036094,GO:0036361,GO:0040007,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044281,GO:0044283,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0047661,GO:0048037,GO:0050662,GO:0070279,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.1 ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 R00401 RC00285 ko00000,ko00001,ko01000,ko01011 iEC55989_1330.EC55989_1285,iECIAI39_1322.ECIAI39_1880,iECO103_1326.ECO103_1292,iECO26_1355.ECO26_1703,iECSE_1348.ECSE_1238,iECUMN_1333.ECUMN_1479,iECW_1372.ECW_m1275,iEKO11_1354.EKO11_2666,iEcE24377_1341.EcE24377A_1335,iPC815.YPO0321,iSBO_1134.SBO_4064,iSbBS512_1146.SbBS512_E4542,iWFL_1372.ECW_m1275,iYL1228.KPN_02308,iYL1228.KPN_04440 Bacteria 2GM2Y@201174,4CZ2Q@85004,COG0787@1,COG0787@2 NA|NA|NA M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids KDBPDICH_01716 547043.BIFPSEUDO_02396 0.0 1356.7 Bifidobacteriales dnaG GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 2GJFX@201174,4CYZG@85004,COG0358@1,COG0358@2 NA|NA|NA L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication KDBPDICH_01717 547043.BIFPSEUDO_02395 2.8e-216 757.7 Bifidobacteriales ybiR GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 2GP6U@201174,4CZ37@85004,COG1055@1,COG1055@2 NA|NA|NA P Citrate transporter KDBPDICH_01719 547043.BIFPSEUDO_02392 0.0 1362.4 Bifidobacteriales tetP ko:K02355,ko:K18220 br01600,ko00000,ko01504,ko03012,ko03029 Bacteria 2GJ64@201174,4CZM5@85004,COG0480@1,COG0480@2 NA|NA|NA J Elongation factor G, domain IV KDBPDICH_01720 547043.BIFPSEUDO_04267 0.0 1222.2 Bifidobacteriales Bacteria 2HKW0@201174,4D00J@85004,COG5617@1,COG5617@2 NA|NA|NA S Psort location CytoplasmicMembrane, score 9.99 KDBPDICH_01721 566552.BIFCAT_00255 1.3e-235 822.0 Bifidobacteriales ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GMGJ@201174,4CZBN@85004,COG0577@1,COG0577@2 NA|NA|NA V ABC transporter permease KDBPDICH_01722 566552.BIFCAT_00254 4.6e-149 534.3 Bifidobacteriales ko:K02003,ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 2GNFW@201174,4CZAW@85004,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter KDBPDICH_01723 547043.BIFPSEUDO_04270 4.3e-149 533.9 Bifidobacteriales ko:K02030,ko:K06950 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 2GNQR@201174,4CYT9@85004,COG2206@1,COG2206@2 NA|NA|NA T HD domain KDBPDICH_01724 547043.BIFPSEUDO_04271 1e-167 595.9 Bifidobacteriales Bacteria 2IBFV@201174,4CYX2@85004,COG0121@1,COG0121@2 NA|NA|NA S Glutamine amidotransferase domain KDBPDICH_01725 547043.BIFPSEUDO_04273 0.0 1428.3 Bifidobacteriales kup GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 ko:K03549 ko00000,ko02000 2.A.72 Bacteria 2GMPQ@201174,4CZM3@85004,COG3158@1,COG3158@2 NA|NA|NA P Transport of potassium into the cell KDBPDICH_01726 547043.BIFPSEUDO_04274 7.7e-185 652.9 Bifidobacteriales tatD ko:K03424 ko00000,ko01000 Bacteria 2GMJJ@201174,4CYZI@85004,COG0084@1,COG0084@2 NA|NA|NA L TatD related DNase KDBPDICH_01727 547043.BIFPSEUDO_04275 0.0 1623.2 Bifidobacteriales Bacteria 2HZF4@201174,4D06Z@85004,COG3534@1,COG3534@2 NA|NA|NA G Alpha-L-arabinofuranosidase C-terminus KDBPDICH_01728 1437609.BCAL_1611 7.6e-23 112.8 Bifidobacteriales Bacteria 2I4RN@201174,4D07N@85004,COG1501@1,COG1501@2 NA|NA|NA G Alpha galactosidase A KDBPDICH_01729 547043.BIFPSEUDO_04278 6.6e-221 773.1 Bifidobacteriales Bacteria 2GJ5Q@201174,4D041@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_01730 547043.BIFPSEUDO_04279 0.0 1659.0 Bifidobacteriales rafA 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 Bacteria 2GJJ1@201174,4CZDM@85004,COG3345@1,COG3345@2 NA|NA|NA G Psort location Cytoplasmic, score 8.87 KDBPDICH_01731 547043.BIFPSEUDO_04280 8e-126 456.4 Bifidobacteriales Bacteria 2AU3T@1,2IJQ7@201174,31JQA@2,4D0VX@85004 NA|NA|NA KDBPDICH_01732 547043.BIFPSEUDO_04281 0.0 1113.2 Bifidobacteriales yknV ko:K02021,ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21 Bacteria 2GITR@201174,4CZ32@85004,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter KDBPDICH_01733 547043.BIFPSEUDO_04282 0.0 1174.5 Bifidobacteriales mdlA2 ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 2GITR@201174,4D028@85004,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter KDBPDICH_01734 547043.BIFPSEUDO_04284 1.1e-214 752.3 Bifidobacteriales lipA Bacteria 2HGIX@201174,4CZUK@85004,COG0657@1,COG0657@2 NA|NA|NA I Hydrolase, alpha beta domain protein KDBPDICH_01735 547043.BIFPSEUDO_04287 5e-27 126.3 Bifidobacteriales Bacteria 2AISH@1,2HAX1@201174,3199B@2,4D2JR@85004 NA|NA|NA S Psort location Cytoplasmic, score 8.87 KDBPDICH_01736 547043.BIFPSEUDO_04286 2.5e-155 554.7 Bifidobacteriales Bacteria 2HZCA@201174,4CZQE@85004,COG0657@1,COG0657@2 NA|NA|NA I alpha/beta hydrolase fold KDBPDICH_01737 566552.BIFCAT_00237 7.9e-232 809.3 Bifidobacteriales Bacteria 2GJFD@201174,4CZ06@85004,COG1215@1,COG1215@2,COG4030@1,COG4030@2 NA|NA|NA M Protein of unknown function (DUF2961) KDBPDICH_01738 547043.BIFPSEUDO_04289 3.2e-153 547.7 Bifidobacteriales ko:K02026,ko:K10119 ko02010,map02010 M00196,M00207 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.28 Bacteria 2GJNN@201174,4CYRC@85004,COG0395@1,COG0395@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_01739 547043.BIFPSEUDO_04290 3.2e-159 567.8 Bifidobacteriales ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2GJZD@201174,4CYTH@85004,COG1175@1,COG1175@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_01740 547043.BIFPSEUDO_04291 5.1e-256 889.8 Bifidobacteriales ko:K10117 ko02010,map02010 M00196 ko00000,ko00001,ko00002,ko02000 3.A.1.1.28 Bacteria 2GP9H@201174,4CYX5@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_01741 547043.BIFPSEUDO_04293 2.2e-190 671.4 Bifidobacteriales Bacteria 2GJDS@201174,4CZR6@85004,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor KDBPDICH_01742 547043.BIFPSEUDO_04294 0.0 1498.8 Bifidobacteriales Bacteria 2GN8M@201174,4D042@85004,COG1215@1,COG1215@2 NA|NA|NA M probably involved in cell wall KDBPDICH_01743 547043.BIFPSEUDO_04295 5e-251 873.2 Bifidobacteriales 3.2.1.14 ko:K01183 ko00520,ko01100,map00520,map01100 R01206,R02334 RC00467 ko00000,ko00001,ko01000 GH18 Bacteria 2I2XD@201174,4CZW2@85004,COG3979@1,COG3979@2 NA|NA|NA S Carbohydrate binding domain KDBPDICH_01744 547043.BIFPSEUDO_04296 0.0 1543.1 Bifidobacteriales Bacteria 2GIZF@201174,4D0M7@85004,COG5001@1,COG5001@2 NA|NA|NA T Diguanylate cyclase, GGDEF domain KDBPDICH_01745 547043.BIFPSEUDO_04297 2.3e-187 661.4 Bifidobacteriales lacR ko:K02529 ko00000,ko03000 Bacteria 2H5ZG@201174,4CZ8A@85004,COG1609@1,COG1609@2 NA|NA|NA K Transcriptional regulator, LacI family KDBPDICH_01746 547043.BIFPSEUDO_04298 8.7e-227 792.7 Bifidobacteriales nagA 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 R02059 RC00166,RC00300 ko00000,ko00001,ko01000 Bacteria 2GK1E@201174,4CZKB@85004,COG1820@1,COG1820@2 NA|NA|NA G Amidohydrolase family KDBPDICH_01747 547043.BIFPSEUDO_04300 1.2e-149 535.8 Bifidobacteriales nagB 3.1.1.31,3.5.99.6 ko:K01057,ko:K02564 ko00030,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00520,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R00765,R02035 RC00163,RC00537 ko00000,ko00001,ko00002,ko01000 Bacteria 2GK7F@201174,4CYYE@85004,COG0363@1,COG0363@2 NA|NA|NA G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion KDBPDICH_01748 547043.BIFPSEUDO_04302 0.0 1305.8 Bifidobacteriales Bacteria 2HZCI@201174,4CZS1@85004,COG3525@1,COG3525@2 NA|NA|NA G Glycosyl hydrolase family 20, domain 2 KDBPDICH_01749 547043.BIFPSEUDO_04303 1.9e-172 611.7 Bifidobacteriales 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 2GZ27@201174,4CZII@85004,COG1940@1,COG1940@2 NA|NA|NA GK ROK family KDBPDICH_01750 547043.BIFPSEUDO_04304 4.4e-164 583.9 Bifidobacteriales ko:K02026 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2GJPZ@201174,4CYV5@85004,COG0395@1,COG0395@2 NA|NA|NA G ABC transporter permease KDBPDICH_01751 547043.BIFPSEUDO_04305 7.5e-147 526.6 Bifidobacteriales ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2GMTW@201174,4CZX2@85004,COG1175@1,COG1175@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_01752 547043.BIFPSEUDO_04306 1.6e-241 841.6 Bifidobacteriales ko:K02027 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2GJIP@201174,4CZ88@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_01753 547043.BIFPSEUDO_04308 1.3e-210 738.8 Bifidobacteriales Bacteria 2GKMZ@201174,4CZUF@85004,COG1940@1,COG1940@2 NA|NA|NA GK ROK family KDBPDICH_01754 547043.BIFPSEUDO_04309 2.8e-261 907.5 Bifidobacteriales lacS ko:K03292,ko:K11104,ko:K16209 ko00000,ko02000 2.A.2,2.A.2.1,2.A.2.2 Bacteria 2HD4Y@201174,4CZRA@85004,COG2211@1,COG2211@2 NA|NA|NA G Psort location CytoplasmicMembrane, score 10.00 KDBPDICH_01755 547043.BIFPSEUDO_04310 0.0 2102.0 Bifidobacteriales lacL 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 Bacteria 2GMAT@201174,4CYYS@85004,COG3250@1,COG3250@2 NA|NA|NA G Psort location Cytoplasmic, score 8.87 KDBPDICH_01756 547043.BIFPSEUDO_04311 1.2e-134 485.7 Bifidobacteriales tenA 3.5.99.2 ko:K03707 ko00730,ko01100,map00730,map01100 R02133,R09993 RC00224,RC00652,RC02832 ko00000,ko00001,ko01000,ko03000 Bacteria 2IGA8@201174,4CZRV@85004,COG0819@1,COG0819@2 NA|NA|NA K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP) KDBPDICH_01758 547043.BIFPSEUDO_04313 0.0 1471.1 Bifidobacteriales cbgA_1 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 Bacteria 2GMAT@201174,4CZH9@85004,COG3250@1,COG3250@2 NA|NA|NA G Belongs to the glycosyl hydrolase 2 family KDBPDICH_01759 547043.BIFPSEUDO_04314 0.0 1285.4 Bifidobacteriales metG GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 2GK4S@201174,4CZ20@85004,COG0143@1,COG0143@2 NA|NA|NA J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation KDBPDICH_01760 547043.BIFPSEUDO_04316 1.1e-106 392.5 Bifidobacteriales Bacteria 2AU2N@1,2IJNI@201174,31JNZ@2,4D047@85004 NA|NA|NA KDBPDICH_01761 547043.BIFPSEUDO_04318 6.1e-191 673.3 Bifidobacteriales rsmI GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 ko:K07056 ko00000,ko01000,ko03009 Bacteria 2GJ9Q@201174,4CZ03@85004,COG0313@1,COG0313@2 NA|NA|NA H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA KDBPDICH_01762 1435051.BMOU_0563 3.6e-17 94.4 Bifidobacteriales 3.2.1.78 ko:K01218 ko00051,ko02024,map00051,map02024 R01332 RC00467 ko00000,ko00001,ko01000 GH26 Bacteria 2GJ4D@201174,4CZ39@85004,COG4124@1,COG4124@2 NA|NA|NA G Glycosyl hydrolase family 26 KDBPDICH_01763 547043.BIFPSEUDO_04322 5.8e-126 456.8 Bifidobacteriales dedA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03975 ko00000 Bacteria 2GKGR@201174,4CZ7Y@85004,COG0586@1,COG0586@2 NA|NA|NA S SNARE associated Golgi protein KDBPDICH_01765 547043.BIFPSEUDO_04325 8.7e-130 469.5 Bifidobacteriales Bacteria 2GJNG@201174,4CYZV@85004,COG0637@1,COG0637@2 NA|NA|NA S HAD hydrolase, family IA, variant 3 KDBPDICH_01766 547043.BIFPSEUDO_04326 8.6e-47 192.6 Bifidobacteriales Bacteria 2BFF7@1,2IN83@201174,3298X@2,4D15M@85004 NA|NA|NA KDBPDICH_01767 547043.BIFPSEUDO_04328 4.5e-115 420.6 Bifidobacteriales hspR ko:K13640 ko00000,ko03000 Bacteria 2IQJ4@201174,4D0Q7@85004,COG0789@1,COG0789@2 NA|NA|NA K transcriptional regulator, MerR family KDBPDICH_01768 547043.BIFPSEUDO_04329 1e-150 539.7 Bifidobacteriales dnaJ1 ko:K03686,ko:K05516 ko00000,ko03029,ko03036,ko03110 Bacteria 2GJKK@201174,4CZ68@85004,COG0484@1,COG0484@2 NA|NA|NA O DnaJ molecular chaperone homology domain KDBPDICH_01769 566552.BIFCAT_01457 7.5e-41 174.1 Bifidobacteriales grpE GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009986,GO:0009987,GO:0009991,GO:0016043,GO:0017076,GO:0019904,GO:0022607,GO:0030234,GO:0030246,GO:0030247,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0071496,GO:0071840,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 ko:K02652,ko:K03687 ko00000,ko02035,ko02044,ko03029,ko03110 3.A.15.2 Bacteria 2GP4F@201174,4CZJ6@85004,COG0576@1,COG0576@2 NA|NA|NA O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ KDBPDICH_01770 566552.BIFCAT_01458 0.0 1149.4 Bifidobacteriales dnaK GO:0000302,GO:0000303,GO:0000305,GO:0001968,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016020,GO:0016310,GO:0019222,GO:0019538,GO:0019899,GO:0030112,GO:0030162,GO:0030312,GO:0030313,GO:0031323,GO:0031325,GO:0031975,GO:0031982,GO:0032268,GO:0032270,GO:0033554,GO:0034599,GO:0034614,GO:0035375,GO:0036211,GO:0040007,GO:0042221,GO:0042603,GO:0043170,GO:0043226,GO:0043227,GO:0043230,GO:0043388,GO:0043412,GO:0044044,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046677,GO:0046688,GO:0046777,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051099,GO:0051101,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051701,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0065009,GO:0070613,GO:0070887,GO:0071450,GO:0071451,GO:0071704,GO:0071944,GO:0080090,GO:0097691,GO:1901564,GO:1901700,GO:1901701,GO:1903317,GO:1903319,GO:1903561,GO:2000677,GO:2000679 ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 Bacteria 2GJTY@201174,4CZDX@85004,COG0443@1,COG0443@2 NA|NA|NA O Heat shock 70 kDa protein KDBPDICH_01771 401473.BDP_2187 2.2e-112 412.1 Bifidobacteriales ko:K07090 ko00000 Bacteria 2I5VT@201174,4CZFS@85004,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein KDBPDICH_01772 1437610.BREU_0860 6.6e-157 560.5 Bifidobacteriales ko:K07133 ko00000 Bacteria 2I96U@201174,4CZD7@85004,COG1373@1,COG1373@2 NA|NA|NA S AAA domain KDBPDICH_01773 547043.BIFPSEUDO_04345 1.7e-137 495.4 Bifidobacteriales ko:K07025 ko00000 Bacteria 2I2GN@201174,4CZF4@85004,COG1011@1,COG1011@2 NA|NA|NA S HAD-hyrolase-like KDBPDICH_01774 547043.BIFPSEUDO_04352 0.0 1414.8 Bifidobacteriales malQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.4.1.18,2.4.1.25,3.2.1.196,5.4.99.15 ko:K00700,ko:K00705,ko:K02438,ko:K06044 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R01824,R02110,R02111,R05196,R09995 RC00049 ko00000,ko00001,ko00002,ko01000,ko04147 CBM48,GH13,GH77 iJN678.malQ Bacteria 2GM5Z@201174,4CZ0F@85004,COG1640@1,COG1640@2 NA|NA|NA G 4-alpha-glucanotransferase KDBPDICH_01775 547043.BIFPSEUDO_04356 3.8e-105 387.5 Bifidobacteriales Bacteria 2IBKF@201174,4D0E0@85004,COG5578@1,COG5578@2 NA|NA|NA S Protein of unknown function, DUF624 KDBPDICH_01776 547043.BIFPSEUDO_04357 1.9e-150 538.5 Bifidobacteriales rafG ko:K10119 ko02010,map02010 M00196 ko00000,ko00001,ko00002,ko02000 3.A.1.1.28 Bacteria 2GJNN@201174,4CYZ9@85004,COG0395@1,COG0395@2 NA|NA|NA G ABC transporter permease KDBPDICH_01777 547043.BIFPSEUDO_04358 3.1e-153 547.7 Bifidobacteriales msmF ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2I330@201174,4CZJC@85004,COG1175@1,COG1175@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component KDBPDICH_01778 547043.BIFPSEUDO_04360 3.5e-172 610.9 Bifidobacteriales Bacteria 2GJBJ@201174,4CZ1Y@85004,COG1609@1,COG1609@2 NA|NA|NA K Psort location Cytoplasmic, score KDBPDICH_01779 547043.BIFPSEUDO_04361 1.9e-176 625.2 Bifidobacteriales Bacteria 2GJBJ@201174,4D00W@85004,COG1609@1,COG1609@2 NA|NA|NA K Periplasmic binding protein-like domain KDBPDICH_01780 547043.BIFPSEUDO_04363 0.0 1205.3 Bifidobacteriales 3.2.1.10,3.2.1.20,3.2.1.93 ko:K01182,ko:K01187,ko:K01226 ko00052,ko00500,ko01100,map00052,map00500,map01100 R00028,R00801,R00802,R00837,R01718,R01791,R06087,R06088,R06113,R06199 RC00028,RC00049,RC00059,RC00077,RC00451 ko00000,ko00001,ko01000 GH13,GH31 Bacteria 2GKS4@201174,4CZ1E@85004,COG0366@1,COG0366@2 NA|NA|NA G Alpha-amylase domain KDBPDICH_01781 547043.BIFPSEUDO_04364 1.4e-253 881.7 Bifidobacteriales amyE ko:K10117 ko02010,map02010 M00196 ko00000,ko00001,ko00002,ko02000 3.A.1.1.28 Bacteria 2GWCY@201174,4CYWG@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_01782 547043.BIFPSEUDO_04365 1.1e-132 479.2 Bifidobacteriales Bacteria 2GNRS@201174,4CZD2@85004,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family KDBPDICH_01783 547043.BIFPSEUDO_04366 8.4e-58 229.6 Bifidobacteriales Bacteria 2B5DJ@1,2IRRR@201174,31Y80@2,4D1E6@85004 NA|NA|NA S Protein of unknown function (DUF4235) KDBPDICH_01784 547043.BIFPSEUDO_04368 7.6e-52 209.9 Bifidobacteriales nfrA 1.5.1.38,1.5.1.39 ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 R05705,R05706 RC00126 ko00000,ko00001,ko01000 Bacteria 2I65Z@201174,4CZ5R@85004,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family KDBPDICH_01785 566552.BIFCAT_01499 5e-69 266.9 Bifidobacteriales nfrA 1.5.1.38,1.5.1.39 ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 R05705,R05706 RC00126 ko00000,ko00001,ko01000 Bacteria 2I65Z@201174,4CZ5R@85004,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family KDBPDICH_01786 547043.BIFPSEUDO_03301 1.4e-184 652.1 Bifidobacteriales Bacteria 2GJBJ@201174,4CZ1Y@85004,COG1609@1,COG1609@2 NA|NA|NA K Psort location Cytoplasmic, score KDBPDICH_01787 547043.BIFPSEUDO_03302 3e-270 937.2 Bifidobacteriales ko:K02027 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2HZBJ@201174,4CZJJ@85004,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein KDBPDICH_01788 547043.BIFPSEUDO_03303 1.7e-162 578.6 Bifidobacteriales ko:K02025,ko:K10118,ko:K15771 ko02010,map02010 M00196,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.28 Bacteria 2GKJI@201174,4D0GQ@85004,COG1175@1,COG1175@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_01789 547043.BIFPSEUDO_03304 6.5e-148 530.0 Bifidobacteriales ko:K02026 M00207 ko00000,ko00002,ko02000 3.A.1.1 Bacteria 2GK1V@201174,4CZVI@85004,COG0395@1,COG0395@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component KDBPDICH_01790 547043.BIFPSEUDO_03305 0.0 1879.4 Bifidobacteriales 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 GH31 Bacteria 2GP4V@201174,4D005@85004,COG1501@1,COG1501@2 NA|NA|NA G Belongs to the glycosyl hydrolase 31 family KDBPDICH_01791 547043.BIFPSEUDO_03306 5.5e-246 856.7 Bifidobacteriales wcoI ko:K16692 ko00000,ko01000,ko01001 Bacteria 2GJ1Y@201174,4CZKW@85004,COG0489@1,COG0489@2,COG3944@1,COG3944@2 NA|NA|NA DM Psort location CytoplasmicMembrane, score KDBPDICH_01792 547043.BIFPSEUDO_03307 3.7e-96 357.5 Bifidobacteriales 3.1.3.48 ko:K01104 ko00000,ko01000 Bacteria 2GMPR@201174,4D0GD@85004,COG0394@1,COG0394@2 NA|NA|NA T Low molecular weight phosphatase family KDBPDICH_01793 547043.BIFPSEUDO_03308 6.5e-74 283.5 Bifidobacteriales Bacteria 2BIKN@1,2IQ4U@201174,32CTH@2,4D19Y@85004 NA|NA|NA KDBPDICH_01794 547043.BIFPSEUDO_03309 1.6e-28 131.3 Bifidobacteriales ko:K07729 ko00000,ko03000 Bacteria 2HZSM@201174,4D1JS@85004,COG1476@1,COG1476@2 NA|NA|NA K Cro/C1-type HTH DNA-binding domain KDBPDICH_01795 547043.BIFPSEUDO_03310 2.9e-72 277.7 Bifidobacteriales Bacteria 29XRD@1,2IT75@201174,30JH2@2,4D1B3@85004 NA|NA|NA KDBPDICH_01796 566552.BIFCAT_01185 9.2e-89 332.8 Bifidobacteriales Bacteria 28PY9@1,2INBV@201174,2ZCI0@2,4D13Q@85004 NA|NA|NA KDBPDICH_01797 547043.BIFPSEUDO_03324 1.2e-167 595.9 Bifidobacteriales Bacteria 2I2GH@201174,4CYVC@85004,COG3583@1,COG3583@2 NA|NA|NA S G5 KDBPDICH_01798 566552.BIFCAT_01182 1.6e-58 231.9 Bifidobacteriales trxA GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.1.8,1.8.1.9 ko:K00384,ko:K03671,ko:K03672 ko00450,ko04621,ko05418,map00450,map04621,map05418 R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000,ko03110 Bacteria 2IKP1@201174,4D11J@85004,COG0526@1,COG0526@2 NA|NA|NA O Belongs to the thioredoxin family KDBPDICH_01799 547043.BIFPSEUDO_03327 4.5e-114 417.2 Bifidobacteriales Bacteria 2GJGZ@201174,4CYT1@85004,COG1051@1,COG1051@2 NA|NA|NA F Domain of unknown function (DUF4916) KDBPDICH_01800 547043.BIFPSEUDO_03329 2e-152 545.0 Bifidobacteriales mhpC Bacteria 2I2GI@201174,4CYXW@85004,COG2267@1,COG2267@2 NA|NA|NA I Alpha/beta hydrolase family KDBPDICH_01801 547043.BIFPSEUDO_03330 1e-209 735.7 Bifidobacteriales nudC GO:0003674,GO:0003824,GO:0004551,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0033554,GO:0034641,GO:0035529,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:1901360 1.3.7.1,3.6.1.22 ko:K03426,ko:K20449 ko00760,ko01100,ko01120,ko04146,map00760,map01100,map01120,map04146 R00103,R03004,R03164,R11104 RC00002,RC02422 ko00000,ko00001,ko01000 iAF1260.b3996,iB21_1397.B21_03826,iBWG_1329.BWG_3656,iEC55989_1330.EC55989_4481,iECBD_1354.ECBD_4036,iECB_1328.ECB_03873,iECDH10B_1368.ECDH10B_4185,iECDH1ME8569_1439.ECDH1ME8569_3856,iECD_1391.ECD_03873,iECIAI1_1343.ECIAI1_4211,iECO103_1326.ECO103_4745,iECO111_1330.ECO111_4813,iECO26_1355.ECO26_5105,iECSE_1348.ECSE_4284,iECW_1372.ECW_m4355,iEKO11_1354.EKO11_4325,iETEC_1333.ETEC_4256,iEcDH1_1363.EcDH1_3998,iEcE24377_1341.EcE24377A_4539,iEcHS_1320.EcHS_A4230,iEcolC_1368.EcolC_4029,iJO1366.b3996,iPC815.YPO3736,iSSON_1240.SSON_4169,iUMNK88_1353.UMNK88_4837,iWFL_1372.ECW_m4355,iY75_1357.Y75_RS17065,iYL1228.KPN_04378 Bacteria 2GJZY@201174,4CZE5@85004,COG2816@1,COG2816@2 NA|NA|NA L NADH pyrophosphatase zinc ribbon domain KDBPDICH_01802 547043.BIFPSEUDO_03331 2.7e-70 271.2 Bifidobacteriales gcvH ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 Bacteria 2IKN2@201174,4D0W7@85004,COG0509@1,COG0509@2 NA|NA|NA E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein KDBPDICH_01803 547043.BIFPSEUDO_03332 4.3e-236 823.5 Bifidobacteriales Bacteria 2GKPS@201174,4CZ13@85004,COG4850@1,COG4850@2 NA|NA|NA S Uncharacterized conserved protein (DUF2183) KDBPDICH_01804 547043.BIFPSEUDO_03333 0.0 1734.2 Bifidobacteriales ptrB 3.4.21.83 ko:K01354 ko05142,ko05143,map05142,map05143 ko00000,ko00001,ko01000,ko01002 Bacteria 2GNA9@201174,4CZ2X@85004,COG1770@1,COG1770@2 NA|NA|NA E Peptidase, S9A B C family, catalytic domain protein KDBPDICH_01805 547043.BIFPSEUDO_03334 2.2e-193 681.4 Bifidobacteriales leuB 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 2GK44@201174,4CZ08@85004,COG0473@1,COG0473@2 NA|NA|NA CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate KDBPDICH_01806 547043.BIFPSEUDO_03336 1.6e-84 319.3 Bifidobacteriales Bacteria 2IQB3@201174,4D11Z@85004,COG2314@1,COG2314@2 NA|NA|NA J TM2 domain KDBPDICH_01807 547043.BIFPSEUDO_03337 2e-216 758.1 Bifidobacteriales lplA 6.3.1.20 ko:K03800 ko00785,ko01100,map00785,map01100 R07770,R07771,R11143 RC00043,RC00070,RC00090,RC00992,RC02896 ko00000,ko00001,ko01000 Bacteria 2GJV5@201174,4CZYA@85004,COG0095@1,COG0095@2 NA|NA|NA H Biotin/lipoate A/B protein ligase family KDBPDICH_01808 547043.BIFPSEUDO_03338 2.3e-133 481.5 Bifidobacteriales glxR GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 ko:K10914 ko02020,ko02024,ko02025,ko02026,ko05111,map02020,map02024,map02025,map02026,map05111 ko00000,ko00001,ko03000 Bacteria 2GMPN@201174,4CYYW@85004,COG0664@1,COG0664@2 NA|NA|NA K helix_turn_helix, cAMP Regulatory protein KDBPDICH_01809 547043.BIFPSEUDO_03339 0.0 1427.9 Bifidobacteriales pon1 2.4.1.129,3.4.16.4 ko:K05365,ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 2GK21@201174,4CZAZ@85004,COG0744@1,COG0744@2 NA|NA|NA M Transglycosylase KDBPDICH_01810 547043.BIFPSEUDO_03341 1.4e-220 771.9 Bifidobacteriales namA 1.6.99.1 ko:K00354 R00282 RC00001 ko00000,ko01000 Bacteria 2GK8E@201174,4CZ9Z@85004,COG1902@1,COG1902@2 NA|NA|NA C NADH:flavin oxidoreductase / NADH oxidase family KDBPDICH_01811 547043.BIFPSEUDO_03342 8.8e-228 795.8 Bifidobacteriales pyrD 1.3.1.14,1.3.5.2,1.3.98.1 ko:K00226,ko:K00254,ko:K02823,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01868,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 Bacteria 2GKC6@201174,4CYWW@85004,COG0167@1,COG0167@2 NA|NA|NA F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor KDBPDICH_01812 1680.BADO_1393 3.4e-141 507.7 Bifidobacteriales glpR ko:K02444 ko00000,ko03000 Bacteria 2H5X4@201174,4CZMT@85004,COG1349@1,COG1349@2 NA|NA|NA K DeoR C terminal sensor domain KDBPDICH_01813 566552.BIFCAT_01165 1.8e-250 871.3 Bifidobacteriales galT 2.7.7.12 ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 M00362,M00554,M00632 R00955 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 2I2DM@201174,4CYXZ@85004,COG1085@1,COG1085@2 NA|NA|NA C Galactose-1-phosphate uridyl transferase, N-terminal domain KDBPDICH_01814 547043.BIFPSEUDO_03346 9e-234 815.8 Bifidobacteriales galK 2.7.1.6,2.7.7.12 ko:K00849,ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 M00362,M00554,M00632 R00955,R01092 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 2GJXI@201174,4CZNV@85004,COG0153@1,COG0153@2 NA|NA|NA G Belongs to the GHMP kinase family. GalK subfamily KDBPDICH_01815 401473.BDP_1788 1.1e-23 115.5 Bifidobacteriales lmrB ko:K18926 M00715 ko00000,ko00002,ko02000 2.A.1.3.30 Bacteria 2GIZX@201174,4CZWX@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily KDBPDICH_01816 566552.BIFCAT_01163 7.1e-43 179.5 Bifidobacteriales gcvR ko:K07166 ko00000 Bacteria 2IKS1@201174,4D11D@85004,COG3830@1,COG3830@2 NA|NA|NA T Belongs to the UPF0237 family KDBPDICH_01817 566552.BIFCAT_01162 4.7e-252 876.7 Bifidobacteriales ko:K09157 ko00000 Bacteria 2HHMF@201174,4CZGB@85004,COG2848@1,COG2848@2 NA|NA|NA S UPF0210 protein KDBPDICH_01818 547043.BIFPSEUDO_03354 3.3e-126 457.6 Bifidobacteriales trmL GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 ko:K03216 ko00000,ko01000,ko03016 Bacteria 2IHN9@201174,4CZ0E@85004,COG0219@1,COG0219@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily KDBPDICH_01819 547043.BIFPSEUDO_03353 1.8e-181 641.7 Bifidobacteriales mutY 2.1.1.37,2.1.3.15,6.4.1.2 ko:K00558,ko:K01962,ko:K01963,ko:K03575 ko00061,ko00270,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko03410,ko05206,map00061,map00270,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212,map03410,map05206 M00035,M00082,M00376 R00742,R04386,R04858 RC00003,RC00040,RC00253,RC00332,RC00367 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 2GJD9@201174,4CYRB@85004,COG1194@1,COG1194@2 NA|NA|NA L FES KDBPDICH_01820 547043.BIFPSEUDO_03355 1.5e-99 369.0 Bifidobacteriales Bacteria 2EJHA@1,2I4ZV@201174,33D88@2,4D2XA@85004 NA|NA|NA KDBPDICH_01821 547043.BIFPSEUDO_03356 0.0 2376.3 Bifidobacteriales rpoB GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 2GJ81@201174,4CZ3W@85004,COG0085@1,COG0085@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates KDBPDICH_01822 547043.BIFPSEUDO_03357 0.0 2536.5 Bifidobacteriales rpoC GO:0000428,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0030880,GO:0032991,GO:0040007,GO:0044424,GO:0044464,GO:0061695,GO:0071944,GO:1902494,GO:1990234 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 2GKWF@201174,4CZ1D@85004,COG0086@1,COG0086@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates KDBPDICH_01823 547043.BIFPSEUDO_03359 1.1e-101 375.9 Bifidobacteriales Bacteria 2IIXF@201174,4D0UU@85004,COG1716@1,COG1716@2 NA|NA|NA T Forkhead associated domain KDBPDICH_01824 547043.BIFPSEUDO_03360 4.8e-104 384.0 Bifidobacteriales Bacteria 2GRHT@201174,4D0W6@85004,COG5602@1,COG5602@2 NA|NA|NA B Belongs to the OprB family KDBPDICH_01825 547043.BIFPSEUDO_03361 4.4e-163 580.5 Bifidobacteriales 3.1.3.16 ko:K01090,ko:K20074 ko00000,ko01000,ko01009 Bacteria 2GJ3M@201174,4CZNH@85004,COG0631@1,COG0631@2 NA|NA|NA T Sigma factor PP2C-like phosphatases KDBPDICH_01826 547043.BIFPSEUDO_03362 0.0 1563.9 Bifidobacteriales Bacteria 2HQBB@201174,4CZ3X@85004,COG1305@1,COG1305@2 NA|NA|NA E Transglutaminase-like superfamily KDBPDICH_01827 547043.BIFPSEUDO_03363 8.3e-221 772.7 Bifidobacteriales Bacteria 2GIWE@201174,4CZWT@85004,COG1721@1,COG1721@2 NA|NA|NA S Protein of unknown function DUF58 KDBPDICH_01828 547043.BIFPSEUDO_03364 2.7e-226 791.2 Bifidobacteriales ko:K03924 ko00000,ko01000 Bacteria 2GK07@201174,4CZ3M@85004,COG0714@1,COG0714@2 NA|NA|NA S ATPase family associated with various cellular activities (AAA) KDBPDICH_01829 547043.BIFPSEUDO_03365 0.0 3767.6 Bifidobacteriales ko:K20276 ko02024,map02024 ko00000,ko00001 Bacteria 2GMKC@201174,4CZFT@85004,COG4733@1,COG4733@2 NA|NA|NA S Fibronectin type 3 domain KDBPDICH_01830 547043.BIFPSEUDO_03366 7.3e-264 916.0 Bifidobacteriales Bacteria 2GIW5@201174,4CZ9N@85004,COG0515@1,COG0515@2 NA|NA|NA KLT Protein tyrosine kinase KDBPDICH_01831 547043.BIFPSEUDO_03368 0.0 2592.4 Bifidobacteriales uvrD 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 2GJD0@201174,4CYQU@85004,COG0210@1,COG0210@2,COG2887@1,COG2887@2 NA|NA|NA L PD-(D/E)XK nuclease superfamily KDBPDICH_01832 547043.BIFPSEUDO_03369 0.0 2634.8 Bifidobacteriales uvrD2 3.6.4.12 ko:K03657,ko:K07465 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 2GM2E@201174,4CZ49@85004,COG0210@1,COG0210@2,COG2887@1,COG2887@2 NA|NA|NA L Belongs to the helicase family. UvrD subfamily KDBPDICH_01833 547043.BIFPSEUDO_03370 1.7e-246 858.2 Bifidobacteriales Bacteria 2I2GK@201174,4CZ0T@85004,COG2271@1,COG2271@2 NA|NA|NA G Major Facilitator Superfamily KDBPDICH_01834 547043.BIFPSEUDO_03371 1.4e-133 482.3 Bifidobacteriales dapB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000 iJN678.dapB,iYO844.BSU22490 Bacteria 2GM2T@201174,4CZJ5@85004,COG0289@1,COG0289@2 NA|NA|NA E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate KDBPDICH_01835 1435051.BMOU_0651 1.1e-38 165.6 Bifidobacteriales csoR GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0042221,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0046688,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K21600 ko00000,ko03000 Bacteria 2IQAC@201174,4D1A2@85004,COG1937@1,COG1937@2 NA|NA|NA S Metal-sensitive transcriptional repressor KDBPDICH_01836 547043.BIFPSEUDO_03373 0.0 1756.1 Bifidobacteriales pacS GO:0000041,GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0008150,GO:0015677,GO:0016020,GO:0030001,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0051179,GO:0051234,GO:0071944 3.6.3.54 ko:K17686 ko01524,ko04016,map01524,map04016 R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 Bacteria 2GIRF@201174,4CZ24@85004,COG2217@1,COG2217@2 NA|NA|NA P E1-E2 ATPase KDBPDICH_01837 547043.BIFPSEUDO_03374 1e-173 615.9 Bifidobacteriales dapA 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 Bacteria 2GJ34@201174,4CZ34@85004,COG0329@1,COG0329@2 NA|NA|NA E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) KDBPDICH_01838 547043.BIFPSEUDO_03375 0.0 1173.7 Bifidobacteriales rnj GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 2GIW7@201174,4CZEJ@85004,COG0595@1,COG0595@2 NA|NA|NA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay KDBPDICH_01839 547043.BIFPSEUDO_03376 0.0 1728.4 Bifidobacteriales pepN 3.4.11.2 ko:K01256 ko00480,ko01100,map00480,map01100 R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 Bacteria 2GJJ4@201174,4CZH4@85004,COG0308@1,COG0308@2 NA|NA|NA E Peptidase family M1 domain KDBPDICH_01840 547043.BIFPSEUDO_03394 8.6e-254 882.5 Bifidobacteriales glmM GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 R02060 RC00408 ko00000,ko00001,ko01000 iAF987.Gmet_1886,iLJ478.TM0184,iSB619.SA_RS11275,iSBO_1134.SBO_3206 Bacteria 2GN87@201174,4CYZX@85004,COG1109@1,COG1109@2 NA|NA|NA G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate KDBPDICH_01841 566552.BIFCAT_01134 5.2e-116 423.7 Bifidobacteriales def GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 ko:K01462 ko00000,ko01000 Bacteria 2GNZ9@201174,4CZ7M@85004,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions KDBPDICH_01842 547043.BIFPSEUDO_03397 7e-292 1009.2 Bifidobacteriales recE GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008309,GO:0008409,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0035312,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051908,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 2.7.7.7,3.6.4.12 ko:K02335,ko:K02342,ko:K03654,ko:K03722,ko:K10906 ko00230,ko00240,ko01100,ko03018,ko03030,ko03410,ko03420,ko03430,ko03440,map00230,map00240,map01100,map03018,map03030,map03410,map03420,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 2IC59@201174,4CZY1@85004,COG0847@1,COG0847@2 NA|NA|NA L Psort location Cytoplasmic, score # 1734 queries scanned # Total time (seconds): 4.42658615112 # Rate: 391.72 q/s