GCA_022725655.1 - 3 region(s)

Identified primary metabolite regions

JAIJBG010000002 (original name was: JAIJBG010000002.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	Fumarate2succinate	SCFA	43,985	66,829	Fumarate2succinate suc dh E. coli	SUC	100%

JAIJBG010000015 (original name was: JAIJBG010000015.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 20.1	Others_HGD_unassigned	Putative	24,437	49,291

JAIJBG010000003 (original name was: JAIJBG010000003.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 23.1	Pyruvate2acetate-formate	SCFA	1	22,507	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: JAIJBG010000001 (original name was: JAIJBG010000001.1); JAIJBG010000011 (original name was: JAIJBG010000011.1); JAIJBG010000054 (original name was: JAIJBG010000054.1); JAIJBG010000055 (original name was: JAIJBG010000055.1); JAIJBG010000056 (original name was: JAIJBG010000056.1); JAIJBG010000027 (original name was: JAIJBG010000027.1); JAIJBG010000012 (original name was: JAIJBG010000012.1); JAIJBG010000028 (original name was: JAIJBG010000028.1); JAIJBG010000057 (original name was: JAIJBG010000057.1); JAIJBG010000013 (original name was: JAIJBG010000013.1); JAIJBG010000058 (original name was: JAIJBG010000058.1); JAIJBG010000029 (original name was: JAIJBG010000029.1); JAIJBG010000030 (original name was: JAIJBG010000030.1); JAIJBG010000031 (original name was: JAIJBG010000031.1); JAIJBG010000014 (original name was: JAIJBG010000014.1); JAIJBG010000032 (original name was: JAIJBG010000032.1); JAIJBG010000033 (original name was: JAIJBG010000033.1); JAIJBG010000034 (original name was: JAIJBG010000034.1); JAIJBG010000035 (original name was: JAIJBG010000035.1); JAIJBG010000016 (original name was: JAIJBG010000016.1); JAIJBG010000017 (original name was: JAIJBG010000017.1); JAIJBG010000018 (original name was: JAIJBG010000018.1); JAIJBG010000059 (original name was: JAIJBG010000059.1); JAIJBG010000060 (original name was: JAIJBG010000060.1); JAIJBG010000036 (original name was: JAIJBG010000036.1); JAIJBG010000061 (original name was: JAIJBG010000061.1); JAIJBG010000062 (original name was: JAIJBG010000062.1); JAIJBG010000063 (original name was: JAIJBG010000063.1); JAIJBG010000037 (original name was: JAIJBG010000037.1); JAIJBG010000038 (original name was: JAIJBG010000038.1); JAIJBG010000039 (original name was: JAIJBG010000039.1); JAIJBG010000004 (original name was: JAIJBG010000004.1); JAIJBG010000040 (original name was: JAIJBG010000040.1); JAIJBG010000064 (original name was: JAIJBG010000064.1); JAIJBG010000041 (original name was: JAIJBG010000041.1); JAIJBG010000019 (original name was: JAIJBG010000019.1); JAIJBG010000065 (original name was: JAIJBG010000065.1); JAIJBG010000042 (original name was: JAIJBG010000042.1); JAIJBG010000066 (original name was: JAIJBG010000066.1); JAIJBG010000020 (original name was: JAIJBG010000020.1); JAIJBG010000067 (original name was: JAIJBG010000067.1); JAIJBG010000068 (original name was: JAIJBG010000068.1); JAIJBG010000043 (original name was: JAIJBG010000043.1); JAIJBG010000005 (original name was: JAIJBG010000005.1); JAIJBG010000069 (original name was: JAIJBG010000069.1); JAIJBG010000044 (original name was: JAIJBG010000044.1); JAIJBG010000070 (original name was: JAIJBG010000070.1); JAIJBG010000045 (original name was: JAIJBG010000045.1); JAIJBG010000046 (original name was: JAIJBG010000046.1); JAIJBG010000071 (original name was: JAIJBG010000071.1); JAIJBG010000072 (original name was: JAIJBG010000072.1); JAIJBG010000047 (original name was: JAIJBG010000047.1); JAIJBG010000048 (original name was: JAIJBG010000048.1); JAIJBG010000073 (original name was: JAIJBG010000073.1); JAIJBG010000074 (original name was: JAIJBG010000074.1); JAIJBG010000075 (original name was: JAIJBG010000075.1); JAIJBG010000006 (original name was: JAIJBG010000006.1); JAIJBG010000076 (original name was: JAIJBG010000076.1); JAIJBG010000077 (original name was: JAIJBG010000077.1); JAIJBG010000078 (original name was: JAIJBG010000078.1); JAIJBG010000079 (original name was: JAIJBG010000079.1); JAIJBG010000080 (original name was: JAIJBG010000080.1); JAIJBG010000081 (original name was: JAIJBG010000081.1); JAIJBG010000082 (original name was: JAIJBG010000082.1); JAIJBG010000049 (original name was: JAIJBG010000049.1); JAIJBG010000083 (original name was: JAIJBG010000083.1); JAIJBG010000084 (original name was: JAIJBG010000084.1); JAIJBG010000007 (original name was: JAIJBG010000007.1); JAIJBG010000085 (original name was: JAIJBG010000085.1); JAIJBG010000086 (original name was: JAIJBG010000086.1); JAIJBG010000021 (original name was: JAIJBG010000021.1); JAIJBG010000087 (original name was: JAIJBG010000087.1); JAIJBG010000088 (original name was: JAIJBG010000088.1); JAIJBG010000089 (original name was: JAIJBG010000089.1); JAIJBG010000090 (original name was: JAIJBG010000090.1); JAIJBG010000091 (original name was: JAIJBG010000091.1); JAIJBG010000022 (original name was: JAIJBG010000022.1); JAIJBG010000092 (original name was: JAIJBG010000092.1); JAIJBG010000023 (original name was: JAIJBG010000023.1); JAIJBG010000093 (original name was: JAIJBG010000093.1); JAIJBG010000094 (original name was: JAIJBG010000094.1); JAIJBG010000095 (original name was: JAIJBG010000095.1); JAIJBG010000096 (original name was: JAIJBG010000096.1); JAIJBG010000008 (original name was: JAIJBG010000008.1); JAIJBG010000097 (original name was: JAIJBG010000097.1); JAIJBG010000098 (original name was: JAIJBG010000098.1); JAIJBG010000099 (original name was: JAIJBG010000099.1); JAIJBG010000100 (original name was: JAIJBG010000100.1); JAIJBG010000101 (original name was: JAIJBG010000101.1); JAIJBG010000102 (original name was: JAIJBG010000102.1); JAIJBG010000103 (original name was: JAIJBG010000103.1); JAIJBG010000104 (original name was: JAIJBG010000104.1); JAIJBG010000024 (original name was: JAIJBG010000024.1); JAIJBG010000105 (original name was: JAIJBG010000105.1); JAIJBG010000106 (original name was: JAIJBG010000106.1); JAIJBG010000050 (original name was: JAIJBG010000050.1); JAIJBG010000107 (original name was: JAIJBG010000107.1); JAIJBG010000108 (original name was: JAIJBG010000108.1); JAIJBG010000109 (original name was: JAIJBG010000109.1); JAIJBG010000009 (original name was: JAIJBG010000009.1); JAIJBG010000110 (original name was: JAIJBG010000110.1); JAIJBG010000111 (original name was: JAIJBG010000111.1); JAIJBG010000112 (original name was: JAIJBG010000112.1); JAIJBG010000113 (original name was: JAIJBG010000113.1); JAIJBG010000114 (original name was: JAIJBG010000114.1); JAIJBG010000025 (original name was: JAIJBG010000025.1); JAIJBG010000026 (original name was: JAIJBG010000026.1); JAIJBG010000051 (original name was: JAIJBG010000051.1); JAIJBG010000010 (original name was: JAIJBG010000010.1); JAIJBG010000052 (original name was: JAIJBG010000052.1); JAIJBG010000053 (original name was: JAIJBG010000053.1)

Compact view

c00002_JAIJBG0.. - Region 1 - Fumarate2succinate

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Location: 43,985 - 66,829 nt. (total: 22,845 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00020_JAIJBG0.. - Region 1 - Others_HGD_unassigned

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Location: 24,437 - 49,291 nt. (total: 24,855 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00023_JAIJBG0.. - Region 1 - Pyruvate2acetate-formate

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Location: 1 - 22,507 nt. (total: 22,507 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters