GCA_900445755.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

UAQL01000009.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	lassopeptide,lanthipeptide-class-iii	59,124	90,359
Region 14.2	RiPP-like	111,492	121,899

UAQL01000016.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	136,055	146,450

Region	Type	From	To	Similarity
Region 14.1	lassopeptide,lanthipeptide-class-iii	59,124	90,359
Region 14.2	RiPP-like	111,492	121,899
Region 23.1	RiPP-like	136,055	146,450

Compact view

UAQL01000009.1 - Region 1 - lanthipeptide-class-iii,lassopeptide

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Location: 59,124 - 90,359 nt. (total: 31,236 nt) Show pHMM detection rules used

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)
lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lasso peptides

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lasso peptide predictions

Lassopeptide(s) for ctg14_71 - Putative Class II

ctg14_71 leader / core peptide / cleaved tail: MKDYVPPAVEVIASFKEATN - GVWFGNYVDVGGAKAPFPWGSN

Legend:

Red: Putative macrolactam
Purple: Putative cleaved off residues

Lanthipeptides

Lasso peptides

Core peptide predictions

No core peptides found.

Core peptide predictions

ctg14_71 - Class II: Cleavage pHMM score: -3.90; RODEO score: 18; Monoisotopic mass: 2306.1 Da; Molecular weight: 2307.5 Da; Number of bridges: 0

UAQL01000009.1 - Region 2 - RiPP-like

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Location: 111,492 - 121,899 nt. (total: 10,408 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

UAQL01000016.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 136,055 - 146,450 nt. (total: 10,396 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.