GCA_901212485.1 - 2 region(s)

Identified primary metabolite regions

CAAKNT010000008 (original name was: CAAKNT010000008.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 8.1	Fumarate2succinate,Pyruvate2acetate-formate	SCFA	77,886	122,174	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

CAAKNT010000012 (original name was: CAAKNT010000012.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 11.1	Others_HGD_unassigned	Putative	1	19,688

No primary metabolite regions were found in these records:: CAAKNT010000001 (original name was: CAAKNT010000001.1); CAAKNT010000002 (original name was: CAAKNT010000002.1); CAAKNT010000003 (original name was: CAAKNT010000003.1); CAAKNT010000004 (original name was: CAAKNT010000004.1); CAAKNT010000005 (original name was: CAAKNT010000005.1); CAAKNT010000006 (original name was: CAAKNT010000006.1); CAAKNT010000007 (original name was: CAAKNT010000007.1); CAAKNT010000009 (original name was: CAAKNT010000009.1); CAAKNT010000010 (original name was: CAAKNT010000010.1); CAAKNT010000013 (original name was: CAAKNT010000013.1); CAAKNT010000014 (original name was: CAAKNT010000014.1); CAAKNT010000015 (original name was: CAAKNT010000015.1); CAAKNT010000016 (original name was: CAAKNT010000016.1); CAAKNT010000017 (original name was: CAAKNT010000017.1); CAAKNT010000018 (original name was: CAAKNT010000018.1); CAAKNT010000019 (original name was: CAAKNT010000019.1); CAAKNT010000020 (original name was: CAAKNT010000020.1); CAAKNT010000022 (original name was: CAAKNT010000022.1); CAAKNT010000023 (original name was: CAAKNT010000023.1); CAAKNT010000025 (original name was: CAAKNT010000025.1); CAAKNT010000026 (original name was: CAAKNT010000026.1); CAAKNT010000027 (original name was: CAAKNT010000027.1); CAAKNT010000028 (original name was: CAAKNT010000028.1); CAAKNT010000029 (original name was: CAAKNT010000029.1); CAAKNT010000030 (original name was: CAAKNT010000030.1); CAAKNT010000032 (original name was: CAAKNT010000032.1); CAAKNT010000033 (original name was: CAAKNT010000033.1); CAAKNT010000034 (original name was: CAAKNT010000034.1); CAAKNT010000035 (original name was: CAAKNT010000035.1); CAAKNT010000036 (original name was: CAAKNT010000036.1); CAAKNT010000037 (original name was: CAAKNT010000037.1); CAAKNT010000038 (original name was: CAAKNT010000038.1); CAAKNT010000039 (original name was: CAAKNT010000039.1); CAAKNT010000040 (original name was: CAAKNT010000040.1); CAAKNT010000045 (original name was: CAAKNT010000045.1); CAAKNT010000049 (original name was: CAAKNT010000049.1); CAAKNT010000050 (original name was: CAAKNT010000050.1); CAAKNT010000051 (original name was: CAAKNT010000051.1); CAAKNT010000052 (original name was: CAAKNT010000052.1); CAAKNT010000053 (original name was: CAAKNT010000053.1)

Compact view

c00008_CAAKNT0.. - Region 1 - Fumarate2succinate,Pyruvate2acetate-formate

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Location: 77,886 - 122,174 nt. (total: 44,289 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))
Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00011_CAAKNT0.. - Region 1 - Others_HGD_unassigned

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Location: 1 - 19,688 nt. (total: 19,688 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.