GCA_901212525.1 - 2 region(s)

Identified primary metabolite regions

CAAKNZ010000018 (original name was: CAAKNZ010000018.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 15.1	Pyruvate2acetate-formate,Fumarate2succinate	SCFA	185,403	225,039	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

CAAKNZ010000031 (original name was: CAAKNZ010000031.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 26.1	Others_HGD_unassigned	Putative	123,883	148,997

No primary metabolite regions were found in these records:: CAAKNZ010000001 (original name was: CAAKNZ010000001.1); CAAKNZ010000002 (original name was: CAAKNZ010000002.1); CAAKNZ010000003 (original name was: CAAKNZ010000003.1); CAAKNZ010000004 (original name was: CAAKNZ010000004.1); CAAKNZ010000006 (original name was: CAAKNZ010000006.1); CAAKNZ010000007 (original name was: CAAKNZ010000007.1); CAAKNZ010000008 (original name was: CAAKNZ010000008.1); CAAKNZ010000009 (original name was: CAAKNZ010000009.1); CAAKNZ010000011 (original name was: CAAKNZ010000011.1); CAAKNZ010000013 (original name was: CAAKNZ010000013.1); CAAKNZ010000014 (original name was: CAAKNZ010000014.1); CAAKNZ010000015 (original name was: CAAKNZ010000015.1); CAAKNZ010000016 (original name was: CAAKNZ010000016.1); CAAKNZ010000017 (original name was: CAAKNZ010000017.1); CAAKNZ010000020 (original name was: CAAKNZ010000020.1); CAAKNZ010000021 (original name was: CAAKNZ010000021.1); CAAKNZ010000022 (original name was: CAAKNZ010000022.1); CAAKNZ010000023 (original name was: CAAKNZ010000023.1); CAAKNZ010000024 (original name was: CAAKNZ010000024.1); CAAKNZ010000025 (original name was: CAAKNZ010000025.1); CAAKNZ010000026 (original name was: CAAKNZ010000026.1); CAAKNZ010000027 (original name was: CAAKNZ010000027.1); CAAKNZ010000028 (original name was: CAAKNZ010000028.1); CAAKNZ010000030 (original name was: CAAKNZ010000030.1); CAAKNZ010000032 (original name was: CAAKNZ010000032.1); CAAKNZ010000033 (original name was: CAAKNZ010000033.1); CAAKNZ010000034 (original name was: CAAKNZ010000034.1); CAAKNZ010000036 (original name was: CAAKNZ010000036.1); CAAKNZ010000037 (original name was: CAAKNZ010000037.1); CAAKNZ010000038 (original name was: CAAKNZ010000038.1); CAAKNZ010000039 (original name was: CAAKNZ010000039.1); CAAKNZ010000040 (original name was: CAAKNZ010000040.1)

Compact view

c00015_CAAKNZ0.. - Region 1 - Fumarate2succinate,Pyruvate2acetate-formate

Download region GenBank file

Location: 185,403 - 225,039 nt. (total: 39,637 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)
Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00026_CAAKNZ0.. - Region 1 - Others_HGD_unassigned

Download region GenBank file

Location: 123,883 - 148,997 nt. (total: 25,115 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.